Ggra1528.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1528.t1
Unique NameGgra1528.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length624
Homology
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A2V3J0J3 (DEAD-box ATP-dependent RNA helicase CshC n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0J3_9FLOR)

HSP 1 Score: 729 bits (1882), Expect = 5.280e-256
Identity = 364/472 (77.12%), Postives = 417/472 (88.35%), Query Frame = 0
Query:   38 DDWYTVIDRISKEDEVASLTM-ASNEGDD-AIFDLGAVDDNSRKLLTRRCYAGVVDIDIEEGGVLSEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGGAYRVPLDRSNFVKRGKDGGMES 507
            ++WYT+   ISK DE+ S+ + +S++G++  + DLGAVDD+SRK+LTR  YAGVVD+DIEEGG+L  DEDNNDMFCGVGL+ALVESE+L+ENL+KNF I TATHVQLAAIPRV DGKDIVIQSHTGSGKTLAFLLPVLDE+D+E  S Q +IV PTREL MQISRECDRLIEGTDIRNLALIGGANPARQ+EKLRK+ PHIVVGTPGRLAELHE R +N +H+Q LVVDEVDQCLQ+ F+ HI YL+ A   AQKVLVSATGDV+SVR+FA S+L++P+LLRVGGSQRIP TI HWHYLVPARLRI+ALRKLMYSEPVP+RAIVFV+DPRRVDIV +RLH+MKV A  LRGNAHKLERAEVLTAFRKGR N+LVTTEVAARGLDVREITHVINL++PTDGDHYLHRAGRCGR+G EGHVISIT ++ AFV++RLARELGIEITRMEPRGG Y  PLDRS  VK+ ++ G  S
Sbjct:   92 EEWYTITKEISKADEIQSIAVPSSDDGEEPGVLDLGAVDDSSRKILTRNSYAGVVDVDIEEGGLLGPDEDNNDMFCGVGLDALVESEELMENLEKNFTIQTATHVQLAAIPRVADGKDIVIQSHTGSGKTLAFLLPVLDEIDIEQSSLQAVIVVPTRELGMQISRECDRLIEGTDIRNLALIGGANPARQIEKLRKQHPHIVVGTPGRLAELHENRDINFKHLQVLVVDEVDQCLQEVFMKHIVYLIEAVRGAQKVLVSATGDVESVRHFAGSHLQDPILLRVGGSQRIPGTIAHWHYLVPARLRIEALRKLMYSEPVPRRAIVFVDDPRRVDIVTERLHRMKVPAVGLRGNAHKLERAEVLTAFRKGRANLLVTTEVAARGLDVREITHVINLDLPTDGDHYLHRAGRCGRVGAEGHVISITTADKAFVMSRLARELGIEITRMEPRGGTYLPPLDRSKMVKQRRERGTRS 563          
BLAST of Ggra1528.t1 vs. uniprot
Match: R7QJR1 (ATP dependant RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR1_CHOCR)

HSP 1 Score: 573 bits (1476), Expect = 5.960e-194
Identity = 289/454 (63.66%), Postives = 361/454 (79.52%), Query Frame = 0
Query:   38 DDWYTVIDRISKEDEVA-SLTMASNE--GDDAIFDLGAVDDNSRKLLTRRCYAGVVDIDIEEGGVLSEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRAT-GRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGGAY 487
            D W+++ +  +K D  +      S+E   +D++FDL  +D   R++L    Y  VVD++I++GGVL +DEDNN++FCGVGL+ALVESE +++NLK+   I TATHVQL+AIPRV D +D+VIQSHTG+GKTLAFLLP+LDE++ E    Q +IVAPTREL MQI  EC+RL EGT IR++ALIGGANP RQV+KLRK QPHIVVGTPGR+AEL E R L +R++   VVDEVDQC+Q      + YLL+    R QKVLVSAT DVDSVR+FA   L +PVLLRVGG+QR+P+ I HW  +VPAR+R++ +RKLM++ PVP RAI FV+DPRRVDIVV RL+QMK+ AGALRGNAHKLERAEVLTAFRKGR+N+LVTTEVAARGLD+ EI+HV NL++PTDGDHY+HRAGRCGR+   G V+SIT +ETAFV+ RL +ELG+ ITRMEPRGG Y
Sbjct:   98 DGWFSISETSAKADTGSYDKVRPSHEIPSEDSVFDLATLDGMGREVLAVASYDQVVDVNIDDGGVLEDDEDNNELFCGVGLDALVESEQILKNLKEGLNIETATHVQLSAIPRVLDKRDVVIQSHTGTGKTLAFLLPLLDEIETESPYVQGVIVAPTRELGMQIFHECERLCEGTGIRSIALIGGANPVRQVDKLRKCQPHIVVGTPGRIAELEENRELRVRNVGMFVVDEVDQCVQAGMGEDVIYLLKTMMRRTQKVLVSATSDVDSVRSFAGKYLHKPVLLRVGGAQRLPRQISHWFCVVPARMRVELVRKLMHTNPVPTRAIAFVDDPRRVDIVVDRLYQMKIVAGALRGNAHKLERAEVLTAFRKGRINLLVTTEVAARGLDIPEISHVFNLDLPTDGDHYVHRAGRCGRVRNVGTVVSITTAETAFVMRRLEKELGVSITRMEPRGGDY 551          
BLAST of Ggra1528.t1 vs. uniprot
Match: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DeaD-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCBBA (LOW QUALITY PROTEIN: ATP-dependent RNA helicase DeaD-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCBBA)

HSP 1 Score: 481 bits (1239), Expect = 3.280e-155
Identity = 242/428 (56.54%), Postives = 314/428 (73.36%), Query Frame = 0
Query:   67 IFDLGAVDDNSRKLLTRRCYAGVVDIDIEEGGVLSEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRAT-GRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGGAYRVPLDR 493
            + DLGAVD+ SR +L+   YA V++ID+++GG L  DEDNN +F G+G + +++SE+ V+ L  +FG  T THVQL A+PR+ +G+DIV+QS+TG+GKTLAFLLP+L+ +D EL + Q ++VAPTRELA+QI+ EC RL   T I +  LIGGANP RQV+KLR+  PH+V+GTPGRLAEL + R L LR  + +VVDEVDQCL+DAF  H+  +L +  G  Q V  SATGD D VR +A   ++EP LLR  G Q++P  I HW  +VPARLRID +RKL+Y++  P  AI FV+DPRRVDIV +RL+ MKV AGALRGNAHKLERAEV+  FRKG + +LVTTEVAARGLDV  ++HV NL++PTD DHY+HR GRC         +SI + ETAFV+ RL ++L + IT ME RGG Y  P  R
Sbjct:  168 LLDLGAVDEASRNVLSASGYARVLNIDVDQGGALETDEDNNQLFSGIGFDVMLDSEEFVKTLNTDFGFHTCTHVQLVAMPRIAEGEDIVMQSYTGTGKTLAFLLPLLERIDPELAAVQAVVVAPTRELAVQIANECARLCANTAITSTPLIGGANPQRQVDKLRRSTPHVVIGTPGRLAELSQNRVLRLRKTRMVVVDEVDQCLEDAFRVHLEAVLSSCPGDRQLVFCSATGDKDIVRRYAQKWMREPALLRFLGKQKVPSNISHWSTVVPARLRIDIIRKLIYTKDPPISAICFVDDPRRVDIVCERLYAMKVPAGALRGNAHKLERAEVIRLFRKGAIRLLVTTEVAARGLDVPAVSHVFNLDLPTDADHYIHRXGRCXXXXXXXXXVSIASPETAFVIRRLEQQLEVGITPMEVRGGEYVPPSQR 595          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A7S3E5W2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E5W2_9RHOD)

HSP 1 Score: 367 bits (942), Expect = 8.000e-117
Identity = 191/403 (47.39%), Postives = 274/403 (67.99%), Query Frame = 0
Query:   86 YAGVVDIDIEEGGVLSEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLL-RATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIV-FVNDPRRVDIVVQRLHQMKV-AAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGG 485
            ++ V+D+   E G + ED      F     E L+ES DL   L  +      T +Q A +P   +G+DIVI SHTG+GKT+AFLLP++++++ + +  Q +IVAPTRELAMQIS ECD+LI+  D+R++ LIGGANPARQ+EK++K +PHIVVGTPGRLAEL+E+R L L  ++  VVDEVDQCL   F++ +  L+ R +   Q +  SAT D  SVRNFA+  +KEP+L+RV   +R+PK + H + +VP R RI+ LRK+ +S+     +++ FV+    VD   + L +M   +  +LRG+A K ERA V+  FR G+  +L+ TE+AARGLD+ E++ V+NL++PTD DHY+HRAGRCGR G EG V+S+T  E AFVV++L +E+G++I      GG
Sbjct:  105 WSQVIDVAAPEDGSILED-----FF----FEVLLESHDLQYTLTMDLDKPRPTKIQSAVVPWALEGRDIVICSHTGTGKTMAFLLPIIEQIEEDSDEVQAMIVAPTRELAMQISGECDKLIQRMDVRSMPLIGGANPARQIEKMKKNKPHIVVGTPGRLAELYESRKLKLSSVRMTVVDEVDQCLSQGFIDTLGSLMKRVSNSNQLIFASATADRVSVRNFALKWMKEPMLVRVEAERRMPKKVSHHYCVVPKRKRIETLRKIAFSQEEQVGSVIAFVDSQSNVDTAAEALSRMGADSVVSLRGDADKRERASVMQGFRNGKAKLLIATEIAARGLDLPEVSIVVNLDLPTDSDHYIHRAGRCGRAGAEGTVVSLTTKENAFVVSKLEKEMGVDIIHSTVYGG 498          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A7S2ZBP0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZBP0_9RHOD)

HSP 1 Score: 367 bits (942), Expect = 5.880e-115
Identity = 191/403 (47.39%), Postives = 274/403 (67.99%), Query Frame = 0
Query:   86 YAGVVDIDIEEGGVLSEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLL-RATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIV-FVNDPRRVDIVVQRLHQMKV-AAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGG 485
            ++ V+D+   E G + ED      F     E L+ES DL   L  +      T +Q A +P   +G+DIVI SHTG+GKT+AFLLP++++++ + +  Q +IVAPTRELAMQIS ECD+LI+  D+R++ LIGGANPARQ+EK++K +PHIVVGTPGRLAEL+E+R L L  ++  VVDEVDQCL   F++ +  L+ R +   Q +  SAT D  SVRNFA+  +KEP+L+RV   +R+PK + H + +VP R RI+ LRK+ +S+     +++ FV+    VD   + L +M   +  +LRG+A K ERA V+  FR G+  +L+ TE+AARGLD+ E++ V+NL++PTD DHY+HRAGRCGR G EG V+S+T  E AFVV++L +E+G++I      GG
Sbjct:  105 WSQVIDVAAPEDGSILED-----FF----FEVLLESHDLQYTLTMDLDKPRPTKIQSAVVPWALEGRDIVICSHTGTGKTMAFLLPIIEQIEEDSDEVQAMIVAPTRELAMQISGECDKLIQRMDVRSMPLIGGANPARQIEKMKKNKPHIVVGTPGRLAELYESRKLKLSSVRMTVVDEVDQCLSQGFIDTLGSLMKRVSNSNQLIFASATADRVSVRNFALKWMKEPMLVRVEAERRMPKKVSHHYCVVPKRKRIETLRKIAFSQEEQVGSVIAFVDSQSNVDTAAEALSRMGADSVVSLRGDADKRERASVMQGFRNGKAKLLIATEIAARGLDLPEVSIVVNLDLPTDSDHYIHRAGRCGRAGAEGTVVSLTTKENAFVVSKLEKEMGVDIIHSTVYGG 498          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A5J4YMB5 (DEAD-box ATP-dependent RNA helicase 47B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMB5_PORPP)

HSP 1 Score: 327 bits (839), Expect = 1.480e-98
Identity = 190/441 (43.08%), Postives = 273/441 (61.90%), Query Frame = 0
Query:   86 YAGVVDIDIEEGGVL--------SEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELES----------TQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHE--ARH--LNLRHMQTLVVDEVDQCLQD--AFLNHITYLLRATGRAQKVLVSATGDVDSVRNFAVS--------NLKEPVLLRVGG-SQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGGAYRVPLDR 493
            ++ +VD+ I +G  +        S +   +     V  EAL+ + +L+ NLK +     A+ +Q   IPR+ DG  +V QSHTGSGKTLAF LP+L+++   LE+           Q +IVAPTRELA+QIS +  +L + TDIR +ALIGGAN ARQ EK++K +PHI+VGTPGRL E+    AR   L L +++ +VVDE+D CLQD  +  +    L R     Q +  SAT D   V+ FA          N   P+L+R+   + R+P  + H   ++P RL ID LR+++++ P+P+ A+ FVND +R++IV +R  +  +AA  LRG A K+ERA VL AF+KG   +L+ TEVAARGLD  ++  V++L++PTD DHYLHRAGRCGR G  G VIS+ + +T FV+ + A+ LGIEIT +  + G   VP D+
Sbjct:   70 WSEIVDVCIPDGRTMFAQEPAGSSAEASPSTFLSSVPFEALLLTPELIRNLKIDMNHHYASLIQSIVIPRILDGHSMVFQSHTGSGKTLAFSLPILEDLIAALEAEEKPGSSVAGVQAVIVAPTRELAVQISEDLRKLTDDTDIRVMALIGGANYARQAEKVKKNKPHIIVGTPGRLNEVSTGGARKSLLPLGNVKFVVVDEIDHCLQDETSAEDLEAVLKRCPKSRQTIFSSATADSQIVKQFAAKWMTSGGERNYSGPLLVRLRSETNRLPPNVTHAFTVIPKRLHIDTLRRILFTAPIPKSAMCFVNDAKRLEIVYERCLEFNIAAVPLRGTADKVERANVLRAFKKGDFTLLIATEVAARGLDCPDVEMVVSLDLPTDADHYLHRAGRCGRAGKPGRVISVADGKTQFVLGKFAKSLGIEITSVSIQQGKI-VPFDK 509          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A7S2ZAC7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAC7_9RHOD)

HSP 1 Score: 307 bits (786), Expect = 7.480e-96
Identity = 155/302 (51.32%), Postives = 216/302 (71.52%), Query Frame = 0
Query:  187 IVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLL-RATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIV-FVNDPRRVDIVVQRLHQMKV-AAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGG 485
            IVAPTRELAMQIS ECD+LI+  D+R++ LIGGANPARQ+EK++K +PHIVVGTPGRLAEL+E+R L L  ++  VVDEVDQCL   F++ +  L+ R +   Q +  SAT D  SVRNFA+  +KEP+L+RV   +R+PK + H + +VP R RI+ LRK+ +S+     +++ FV+    VD   + L +M   +  +LRG+A K ERA V+  FR G+  +L+ TE+AARGLD+ E++ V+NL++PTD DHY+HRAGRCGR G EG V+S+T  E AFVV++L +E+G++I      GG
Sbjct:   27 IVAPTRELAMQISGECDKLIQRMDVRSMPLIGGANPARQIEKMKKNKPHIVVGTPGRLAELYESRKLKLSSVRMTVVDEVDQCLSQGFIDTLGSLMKRVSNSNQLIFASATADRVSVRNFALKWMKEPMLVRVEAERRMPKKVSHHYCVVPKRKRIETLRKIAFSQEEQVGSVIAFVDSQSNVDTAAEALSRMGADSVVSLRGDADKRERASVMQGFRNGKAKLLIATEIAARGLDLPEVSIVVNLDLPTDSDHYIHRAGRCGRAGAEGTVVSLTTKENAFVVSKLEKEMGVDIIHSTVYGG 328          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A7S3E742 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E742_9RHOD)

HSP 1 Score: 307 bits (786), Expect = 6.980e-94
Identity = 155/302 (51.32%), Postives = 216/302 (71.52%), Query Frame = 0
Query:  187 IVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLL-RATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIV-FVNDPRRVDIVVQRLHQMKV-AAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGG 485
            IVAPTRELAMQIS ECD+LI+  D+R++ LIGGANPARQ+EK++K +PHIVVGTPGRLAEL+E+R L L  ++  VVDEVDQCL   F++ +  L+ R +   Q +  SAT D  SVRNFA+  +KEP+L+RV   +R+PK + H + +VP R RI+ LRK+ +S+     +++ FV+    VD   + L +M   +  +LRG+A K ERA V+  FR G+  +L+ TE+AARGLD+ E++ V+NL++PTD DHY+HRAGRCGR G EG V+S+T  E AFVV++L +E+G++I      GG
Sbjct:   27 IVAPTRELAMQISGECDKLIQRMDVRSMPLIGGANPARQIEKMKKNKPHIVVGTPGRLAELYESRKLKLSSVRMTVVDEVDQCLSQGFIDTLGSLMKRVSNSNQLIFASATADRVSVRNFALKWMKEPMLVRVEAERRMPKKVSHHYCVVPKRKRIETLRKIAFSQEEQVGSVIAFVDSQSNVDTAAEALSRMGADSVVSLRGDADKRERASVMQGFRNGKAKLLIATEIAARGLDLPEVSIVVNLDLPTDSDHYIHRAGRCGRAGAEGTVVSLTTKENAFVVSKLEKEMGVDIIHSTVYGG 328          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A7S4BCL2 (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCL2_CHRCT)

HSP 1 Score: 286 bits (732), Expect = 6.910e-85
Identity = 158/396 (39.90%), Postives = 249/396 (62.88%), Query Frame = 0
Query:  101 SEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELH-EARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRATG---RAQKVLVSATGDVDSVRNFAVSNLKEPVLLRV------GGSQRIPKTIFHWHYLVPARLRIDALRKLMYSEPVPQRAIVFVNDPRRVDIVVQRL-HQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGG 485
            +E  D+++ F G+G+   V    ++ENLK  F ITT   +QLAA   +  G+D++I +HTGSGKTLAFLLP+++++D   +  Q L+++P+RELA Q  R  + L++ + +R ++L GGANP+RQ+E++RK++P +++GT GR+ EL+ EA+ L L+ ++ LV+DEVD+ L+   L   T L+       R Q +  SAT D   V+  A+  ++ P+LL++       G   +P  + H    VPA  +++ L +     P P +A+VFVN P R  +V Q L     V A +L G   + ER  V+ AF  G++ ++++TE+ ARGLD+  +THV+NLE+PTD  HY+HRAGRCGR G  G V+S+   ++  V+T+LA  LG+E+  M+ R G
Sbjct:  121 AEAVDSSNSFEGLGVTVPV----VIENLKAAF-ITTPNALQLAAFEPIASGRDVLIHAHTGSGKTLAFLLPLIEQLDPSSKEPQALVLSPSRELAYQTYRVAEMLLKDSPLRVVSLAGGANPSRQIERVRKERPQLLIGTAGRVCELNFEAKKLKLQRVRHLVLDEVDEALRTPHLEPTTRLIELMQDRRRLQLIFASATADTPMVQRSALQLMESPLLLQLQLDGATSGGVGLPPHLVHALCAVPAPKQLETLGRFARISPAP-KALVFVNSPHRAQVVAQMLVESYGVRAASLHGKQEREERVAVMRAFHSGKLPLIISTEMGARGLDIPGLTHVVNLELPTDERHYVHRAGRCGRAGVAGTVLSLVPHKSVPVLTKLASRLGVELAEMQVRAG 510          
BLAST of Ggra1528.t1 vs. uniprot
Match: A0A1B1N2F6 (DEAD/DEAH box helicase n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A1B1N2F6_9BACL)

HSP 1 Score: 279 bits (714), Expect = 1.490e-83
Identity = 164/392 (41.84%), Postives = 239/392 (60.97%), Query Frame = 0
Query:  110 FCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTDGKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISRECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEARHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRATGRAQKVLVSATGDVDSVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLM--YSEPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAFRKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGGEGHVISITNSETAFVVTRLARELGIEITRMEPRGGAYRVPLDRSNFVKR 499
            F  +G+E     E L E L + FGI T + VQ +AIP V +G+D++ QS TG+GKTLA+LLPVL  +D E +  Q LI+APT+ELAMQI RE  R  EGT I   ALIGGA   RQVE+L KK P +V+GTPGR+ EL   R L L   + LV+DEVDQ  Q      +  +L+A+ R +++L  +    D +R+ A   +K+PV + +   QR   T+ H +++   R +ID +R+++  Y EP   + +VFVN    +  V  +L+ + + AGAL G+A K  R+  L  FR+G   +LV ++VAARGLD+ ++  VI+L+  TD ++Y+HRAGR GR+G +G  IS+ + +  F++ + ARELGI        GG    P + S   +R
Sbjct:    6 FTNIGVE-----ERLTERLAE-FGILTPSPVQESAIPAVLEGRDVLAQSQTGTGKTLAYLLPVLQRIDPERKVMQSLILAPTQELAMQILRESQRYAEGTGIEVQALIGGAAIGRQVERL-KKHPQLVIGTPGRVRELLSIRKLKLHETRMLVIDEVDQLFQLGGAGDVDQILKASLRDRQLLFLSATVTDEIRSLAAREMKDPVEIGIKPEQRTSATLEHLYFVCEQRDKIDLVRRIVRTYDEP---KVLVFVNQIDSIGEVEAKLNYVGLNAGALYGDADKTARSLTLRRFREGEYRVLVASDVAARGLDIEQLGMVIHLDPATDSENYVHRAGRTGRMGRKGLSISVVSPQETFIIRKFARELGISFGLRGLTGGRITAPKEESRPYRR 387          
The following BLAST results are available for this feature:
BLAST of Ggra1528.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0J35.280e-25677.12DEAD-box ATP-dependent RNA helicase CshC n=1 Tax=G... [more]
R7QJR15.960e-19463.66ATP dependant RNA helicase n=1 Tax=Chondrus crispu... [more]
LOW QUALITY PROTEIN: ATP-dependent RNA helicase DeaD-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCBBA3.280e-15556.54LOW QUALITY PROTEIN: ATP-dependent RNA helicase De... [more]
A0A7S3E5W28.000e-11747.39Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZBP05.880e-11547.39Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YMB51.480e-9843.08DEAD-box ATP-dependent RNA helicase 47B n=1 Tax=Po... [more]
A0A7S2ZAC77.480e-9651.32Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3E7426.980e-9451.32Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S4BCL26.910e-8539.90Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A1B1N2F61.490e-8341.84DEAD/DEAH box helicase n=2 Tax=Paenibacillus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 368..449
e-value: 1.6E-22
score: 90.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 341..449
e-value: 4.7E-22
score: 78.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 343..497
score: 17.415356
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 133..329
e-value: 1.1E-45
score: 167.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 145..315
score: 25.504532
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 138..302
e-value: 8.6E-41
score: 139.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 338..578
e-value: 1.0E-35
score: 125.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 101..319
e-value: 7.1E-57
score: 194.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 183..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..623
NoneNo IPR availablePANTHERPTHR47963DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALcoord: 131..584
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 333..457
e-value: 6.50809E-38
score: 134.942
NoneNo IPR availableCDDcd00268DEADccoord: 124..317
e-value: 4.56975E-68
score: 218.08

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:323016..324887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1528.t1Ggra1528.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 323016..324887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1528.t1 ID=Ggra1528.t1|Name=Ggra1528.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=624bp
MLVEDDAETVESIGEDEVDGEDEAEGEDEAEGDGEGWDDWYTVIDRISKE
DEVASLTMASNEGDDAIFDLGAVDDNSRKLLTRRCYAGVVDIDIEEGGVL
SEDEDNNDMFCGVGLEALVESEDLVENLKKNFGITTATHVQLAAIPRVTD
GKDIVIQSHTGSGKTLAFLLPVLDEMDVELESTQVLIVAPTRELAMQISR
ECDRLIEGTDIRNLALIGGANPARQVEKLRKKQPHIVVGTPGRLAELHEA
RHLNLRHMQTLVVDEVDQCLQDAFLNHITYLLRATGRAQKVLVSATGDVD
SVRNFAVSNLKEPVLLRVGGSQRIPKTIFHWHYLVPARLRIDALRKLMYS
EPVPQRAIVFVNDPRRVDIVVQRLHQMKVAAGALRGNAHKLERAEVLTAF
RKGRVNMLVTTEVAARGLDVREITHVINLEMPTDGDHYLHRAGRCGRIGG
EGHVISITNSETAFVVTRLARELGIEITRMEPRGGAYRVPLDRSNFVKRG
KDGGMESRQAKDEKTAAQVKKRAQYQKIASSMDKPKRKKVKEELRKSEAK
ERVKTKLKAKEKGEMRAANRMKAKKKEGGPKEGGPKEGGPKEGGSKAETL
SAKEKRRMSVREIAQREGWVGNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase