Ggra1518.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1518.t1
Unique NameGgra1518.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length132
Homology
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BLAST of Ggra1518.t1 vs. uniprot
Match: A0A2V3J0P1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0P1_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 2.650e-36
Identity = 75/135 (55.56%), Postives = 96/135 (71.11%), Query Frame = 0 
Query:    2 SLTPATAHSEHFSEICAAPTLQLSKLCTAAVDIEPQESPSSPKRVATCPFAVL-APSVAANQQHTVAI----EPSSTNSTTTLNVTRRQCPRWVRVLRFSARFVAKQVVLRSMKRVVGQAFRSMCPALQAAPKQL 131
            ++TP+   SE    + +  T+Q+SK+ +A VDI+P E PSS K   TCPFA L +P+ A + +  VAI       +T +TTT+NV+ RQCPRWVRVLRFSAR+VAKQV+LRS K + G A RSMCPALQAAPKQL
Sbjct:    5 AITPSA--SEDRRGVLSGSTMQISKITSATVDIKPLEHPSSSKHRPTCPFASLVSPADAIHSEDAVAITADTNAETTAATTTVNVSHRQCPRWVRVLRFSARYVAKQVLLRSAKNIFGHAMRSMCPALQAAPKQL 137
The following BLAST results are available for this feature:
BLAST of Ggra1518.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0P12.650e-3655.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:301369..301764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1518.t1Ggra1518.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 301369..301764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1518.t1 ID=Ggra1518.t1|Name=Ggra1518.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=132bp
MSLTPATAHSEHFSEICAAPTLQLSKLCTAAVDIEPQESPSSPKRVATCP
FAVLAPSVAANQQHTVAIEPSSTNSTTTLNVTRRQCPRWVRVLRFSARFV
AKQVVLRSMKRVVGQAFRSMCPALQAAPKQL*
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