Ggra1505.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A2V3J0P6 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0P6_9FLOR) HSP 1 Score: 179 bits (455), Expect = 1.800e-56 Identity = 86/116 (74.14%), Postives = 103/116 (88.79%), Query Frame = 0
Query: 1 MASKQKGKKEQSGKSAGRKSMLLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
M++K KGK +QSG+ GRKSMLLD+V+KRVGVITNDGRM++G + G+DQVCNIVL+KCVERVFE N+PMQTI+SD LNTFIIRGD+IAVIGEID+EKD+KE+WT K GHPI V H
Sbjct: 1 MSAKPKGKSDQSGRPGGRKSMLLDFVNKRVGVITNDGRMLVGNMLGYDQVCNIVLDKCVERVFEPNQPMQTISSDSLNTFIIRGDDIAVIGEIDSEKDDKESWTGKTGHPIKPVVH 116
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A0L0VWC4 (U6 snRNA-associated Sm-like protein LSm8 n=5 Tax=Puccinia TaxID=5296 RepID=A0A0L0VWC4_9BASI) HSP 1 Score: 100 bits (248), Expect = 3.190e-25 Identity = 46/97 (47.42%), Postives = 67/97 (69.07%), Query Frame = 0
Query: 20 SMLLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
S + DY+DKRV +IT DGR I G L+GFDQ NI+L +ERV+ +++PM+ + PL +I+RGD+I+VIGE+D E D+ W+S R P+ + H
Sbjct: 3 SKIADYLDKRVLIITQDGRTITGELKGFDQTTNIILSDSIERVYSSDEPMEEV---PLGLYIVRGDHISVIGELDVEADKNIDWSSIRAEPLYEIRH 96
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A1Y1XHS3 (U6 snRNA-associated Sm-like protein LSm8 n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1XHS3_9FUNG) HSP 1 Score: 100 bits (248), Expect = 3.380e-25 Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 0
Query: 22 LLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
L DY+D+ + VITNDGR+I+G+L+G+DQ NI+LE VER+F +P + + S L IIRGDNIAV+G+ID E+DE W+ + +PI V++
Sbjct: 4 LQDYIDQHISVITNDGRVIIGVLKGYDQATNIILEHSVERIF---RPTEGVESSELGLHIIRGDNIAVVGQIDVEEDENIDWSLVQANPILPVNY 95
BLAST of Ggra1505.t1 vs. uniprot
Match: M2XP62 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XP62_GALSU) HSP 1 Score: 98.6 bits (244), Expect = 1.260e-24 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 0
Query: 20 SMLLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
S+L YVDK V V+TNDGR+++G+L+GFDQ CN++LE VER+F + MQ +A + +++RGD+IA++GE+DAEK+ + + + P+ V H
Sbjct: 2 SLLSSYVDKTVSVVTNDGRILIGILKGFDQSCNVILESTVERIFGTDVAMQEVA---VGLYVLRGDDIAILGELDAEKESETDFQQIQAAPLRPVVH 95
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A194S7Z2 (U6 snRNA-associated Sm-like protein LSm8 n=2 Tax=Rhodotorula TaxID=5533 RepID=A0A194S7Z2_RHOGW) HSP 1 Score: 96.3 bits (238), Expect = 1.020e-23 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 0
Query: 20 SMLLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
S L YVDK+V VIT DGR+I+G L+GFDQ N++L VERVF A++P++ + PL +I+RGDNI +IGE+D E D++ + R PI+ + H
Sbjct: 2 SALTAYVDKQVLVITQDGRVIVGELKGFDQTTNVILSGSVERVFSADEPVEEV---PLGVYIVRGDNITLIGEVDTELDKQVDLATVRAEPISELQH 95
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A087SUD4 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SUD4_AUXPR) HSP 1 Score: 95.5 bits (236), Expect = 2.240e-23 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 25 YVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
YVD + VITNDGR I+G+LRGFDQ CN++L++C ERV+ + ++ + L ++IRGDNIAVIGE+D E D + + S R P+ V H
Sbjct: 10 YVDTTISVITNDGRSIVGVLRGFDQTCNLILDECHERVYSSKAGVEQLV---LGLYVIRGDNIAVIGEVDEELDAQLDFDSLRAEPLQPVTH 98
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A180GTI4 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Puccinia triticina (isolate 1-1 / race 1 (BBBD)) TaxID=630390 RepID=A0A180GTI4_PUCT1) HSP 1 Score: 96.7 bits (239), Expect = 3.200e-23 Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0
Query: 27 DKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
DKRV VIT DGR+I G L+GFDQ NI+L VERV+ +++PM+ + PL +I+RGD+I+VIGE+D E D K W+S R P++ + H
Sbjct: 63 DKRVLVITQDGRIITGELKGFDQTTNIILSDSVERVYSSDEPMEEV---PLGLYIVRGDHISVIGELDVEADAKIDWSSIRAEPLDEIRH 149
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A7S0JLP8 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JLP8_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 4.570e-23 Identity = 47/97 (48.45%), Postives = 65/97 (67.01%), Query Frame = 0
Query: 20 SMLLDYVDKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
+ML YVDK V V+TNDGR I+GLL+GFDQ N++L++C ERVF + ++ + L +I+RGDNIAV+GE+D E DE T+ P+ V H
Sbjct: 18 AMLESYVDKVVHVVTNDGRNIVGLLKGFDQTTNVILDECHERVFSTDAGVEQVV---LGLYIVRGDNIAVVGEVDEEADEALELTAIMAEPLKPVVH 111
BLAST of Ggra1505.t1 vs. uniprot
Match: H6QPF4 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) TaxID=418459 RepID=H6QPF4_PUCGT) HSP 1 Score: 95.9 bits (237), Expect = 6.410e-23 Identity = 46/90 (51.11%), Postives = 63/90 (70.00%), Query Frame = 0
Query: 27 DKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
DKRV VIT DGR I G L+GFDQ NI+L VERV+ +++PM+ + PL +I+RGD+I+VIGE+D E D K W+S R P++ + H
Sbjct: 63 DKRVLVITQDGRTITGELKGFDQTTNIILSDSVERVYSSDEPMEEV---PLGLYIVRGDHISVIGELDVEADAKIDWSSIRAEPLDEIRH 149
BLAST of Ggra1505.t1 vs. uniprot
Match: A0A0L6VM58 (U6 snRNA-associated Sm-like protein LSm8 n=1 Tax=Puccinia sorghi TaxID=27349 RepID=A0A0L6VM58_9BASI) HSP 1 Score: 94.7 bits (234), Expect = 1.120e-22 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0
Query: 27 DKRVGVITNDGRMILGLLRGFDQVCNIVLEKCVERVFEANKPMQTIASDPLNTFIIRGDNIAVIGEIDAEKDEKETWTSKRGHPINLVHH 116
DKRV VIT DGR I G L+GFDQ NI+L +ERVF +++PM+ + PL +I+RGD+I+VIGE+D + D K W S R P++ + H
Sbjct: 45 DKRVLVITQDGRTITGELKGFDQTTNIILSDSIERVFSSDEPMEEV---PLGLYIVRGDHISVIGELDVDADTKIDWPSIRAEPLDEIRH 131 The following BLAST results are available for this feature:
BLAST of Ggra1505.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1505.t1 ID=Ggra1505.t1|Name=Ggra1505.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=117bpback to top |