Ggra1504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1504.t1
Unique NameGgra1504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length74
Homology
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A1X6NNW0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NNW0_PORUM)

HSP 1 Score: 84.0 bits (206), Expect = 1.940e-19
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            +RIVPLLDRVLI+K   +KTS GG++LPES VSKLNEGKV+AVGPGAR  DG +I P
Sbjct:   10 RRIVPLLDRVLIEKVAPKKTSAGGILLPESVVSKLNEGKVLAVGPGARGKDGEVIPP 66          
BLAST of Ggra1504.t1 vs. uniprot
Match: M2XZN5 (Chaperonin GroES n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZN5_GALSU)

HSP 1 Score: 79.3 bits (194), Expect = 1.100e-17
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    3 SRIVKRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            S + KR++PLLDRVL++K   +K + GGV+LPESA+SKLNE KV+AVGPG+RT DG  + P
Sbjct:    2 SGVGKRLIPLLDRVLVEKLQPKKKTAGGVLLPESAISKLNEAKVVAVGPGSRTQDGKTVPP 62          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A7R9BVA5 (10 kDa heat shock protein, mitochondrial n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BVA5_9CRUS)

HSP 1 Score: 78.2 bits (191), Expect = 3.230e-17
Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    3 SRIVKRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP-----DDELL 68
            ++++KR  PL DRVLIQKAVAE  S+GG+++PE A+ K+  G V+AVGPG RT DG+ IQP     DD LL
Sbjct:    2 AQVLKRFKPLFDRVLIQKAVAETKSKGGIVIPEKALGKVIHGTVVAVGPGHRTEDGSFIQPSVNVGDDVLL 72          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A0D2JVK9 (Chaperonin n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JVK9_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 8.740e-17
Identity = 36/57 (63.16%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            +R++PLLDRVLI++ +A   S GGV+LPESAV+K+NEG V+AVGPG RT DG L+ P
Sbjct:    4 RRLIPLLDRVLIERIIAPTKSAGGVLLPESAVTKVNEGVVLAVGPGRRTKDGDLLPP 60          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A059LRW2 (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LRW2_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 7.310e-16
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            K+++PLLDRVL+QKAVA   S GG++LPESA SK+N+G V+AVG G RT +G LI P
Sbjct:    5 KKLIPLLDRVLVQKAVAPTKSVGGILLPESATSKVNKGTVLAVGQGRRTNNGELIAP 61          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A7S0V5Z7 (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V5Z7_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 1.400e-15
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            +R++PLLDRVLI+K      S GG++LPESAVSK+NEG VI+VGPG RT +G LI P
Sbjct:    3 RRLIPLLDRVLIEKVQPVTKSAGGILLPESAVSKINEGIVISVGPGRRTVNGDLIPP 59          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A383WPU6 (Uncharacterized protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WPU6_TETOB)

HSP 1 Score: 72.8 bits (177), Expect = 3.990e-15
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLI 61
            +R++PLLDRVLI++ +A   S GGV+LPESAV K+NEG V+AVGPG R  DG LI
Sbjct:    3 RRLIPLLDRVLIERIIAPTKSAGGVLLPESAVPKVNEGVVLAVGPGRRNKDGDLI 57          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A150H471 (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H471_GONPE)

HSP 1 Score: 72.8 bits (177), Expect = 4.090e-15
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLI 61
            +R++PLLDRVLI K  A   S GGV+LPESA+ K+NEG+VIAVGPG RT +G L+
Sbjct:    4 RRLIPLLDRVLIDKVQAATKSAGGVLLPESALQKVNEGRVIAVGPGRRTKEGELL 58          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A0D2WKI6 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WKI6_CAPO3)

HSP 1 Score: 72.4 bits (176), Expect = 6.110e-15
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 MASRIVKRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            MA+ + +R+ PL DRVL+++ VA + ++ G++LPESAV  LNEG VIAVGPGAR   G LI P
Sbjct:    1 MAANVARRLKPLFDRVLVERLVAPQKTKSGILLPESAVPALNEGVVIAVGPGARDQAGNLIPP 63          
BLAST of Ggra1504.t1 vs. uniprot
Match: A0A7S0WKQ9 (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WKQ9_9CHLO)

HSP 1 Score: 72.0 bits (175), Expect = 8.890e-15
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    7 KRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVGPGARTTDGTLIQP 63
            +R++PLLDRVL+++      S GGV+LPE+A+ KLNEG VIAVGPG RT DG +I+P
Sbjct:    4 RRLIPLLDRVLVERVQHAAKSAGGVLLPETALPKLNEGVVIAVGPGRRTKDGEVIKP 60          
The following BLAST results are available for this feature:
BLAST of Ggra1504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X6NNW01.940e-1971.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2XZN51.100e-1760.66Chaperonin GroES n=1 Tax=Galdieria sulphuraria Tax... [more]
A0A7R9BVA53.230e-1756.3410 kDa heat shock protein, mitochondrial n=1 Tax=N... [more]
A0A0D2JVK98.740e-1763.16Chaperonin n=1 Tax=Monoraphidium neglectum TaxID=1... [more]
A0A059LRW27.310e-1663.16Uncharacterized protein n=1 Tax=Helicosporidium sp... [more]
A0A7S0V5Z71.400e-1563.16Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A383WPU63.990e-1563.64Uncharacterized protein n=2 Tax=Scenedesmaceae Tax... [more]
A0A150H4714.090e-1563.64Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A0D2WKI66.110e-1555.56Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A7S0WKQ98.890e-1559.65Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 73..73
NoneNo IPR availablePANTHERPTHR10772:SF010 KDA HEAT SHOCK PROTEIN, MITOCHONDRIALcoord: 2..63
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 31..52
score: 47.87
coord: 9..24
score: 43.03
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 8..71
e-value: 1.9E-7
score: 40.7
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 9..62
e-value: 1.6E-15
score: 56.9
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 2..63
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 8..64
e-value: 7.07474E-19
score: 71.3843
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40GroES chaperonincoord: 1..71
e-value: 5.8E-17
score: 63.5
IPR018369Chaperonin GroES, conserved sitePROSITEPS00681CHAPERONINS_CPN10coord: 9..33
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 6..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:275233..275629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1504.t1Ggra1504.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 275233..275629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1504.t1 ID=Ggra1504.t1|Name=Ggra1504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=74bp
MASRIVKRIVPLLDRVLIQKAVAEKTSRGGVILPESAVSKLNEGKVIAVG
PGARTTDGTLIQPDDELLGVIEH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR018369Chaprnonin_Cpn10_CS
IPR011032GroES-like_sf