Ggra1472.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1472.t1
Unique NameGgra1472.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length347
Homology
BLAST of Ggra1472.t1 vs. uniprot
Match: A0A2V3J0E7 (PXMP2/4 family protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0E7_9FLOR)

HSP 1 Score: 287 bits (735), Expect = 3.810e-92
Identity = 150/276 (54.35%), Postives = 194/276 (70.29%), Query Frame = 0
Query:   70 RLSQAPLHTFSTSRTPSKQPICAFDKVPKALPDWWDXXXXXXTTDEFHALHFENANPQVALGSGSGSLASNGGSGGSGRGDDEKFNGDGGKPNDGLLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNEAI 345
            R+ Q   H F T+R+P+++ + AFDK+PK LPDW  XXXXXX       +  E+ N ++A  SG G    N G    G+ +D     DG K   G LA L AMY  A+ R P+ TKAITTS +AF+GD+LAQ LSQ     + WD RR+LSIS+WGL FMGP LHYW+ TLDRLF  KY++  KL++DQL+FAP FN AFM+G+G LEG+S +++++N++ KLW  MKANW LWPAAQ +NFS VPK+ QV+YVNCVAL+WN+IF YISHS NE +
Sbjct:   61 RIQQGGTHVFDTTRSPTRRTVTAFDKIPKQLPDWXXXXXXXXXXXXX--MRSEDTNSEMAYESGGGGNXXNRGGERDGKPEDGS---DGQKA--GWLATLFAMYAGALVRTPLRTKAITTSALAFIGDLLAQKLSQADEKEYSWDKRRSLSISLWGLVFMGPVLHYWYLTLDRLFRHKYAIFTKLLSDQLVFAPCFNAAFMLGIGALEGNSLKDIADNIKAKLWPVMKANWTLWPAAQVVNFSIVPKDFQVIYVNCVALIWNVIFTYISHSANEEV 329          
BLAST of Ggra1472.t1 vs. uniprot
Match: R7QQZ3 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ3_CHOCR)

HSP 1 Score: 229 bits (583), Expect = 1.440e-69
Identity = 105/179 (58.66%), Postives = 136/179 (75.98%), Query Frame = 0
Query:  163 DGLLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSK 341
            +G+ A L+A Y+RA+  NP+ TKA++T ++A LGD+LAQ +SQ G   F  DMRR+ S+ +WGL  +GP LHYW+  LDRLF  +Y+VI KL++DQLLFAP  NTAFM+GVG+LEG+ F EVS  VR K W + KANW LWPAAQ +NFS VPK  Q+VYVNCVALVW++I  YI+H +
Sbjct:  135 EGIFALLLAAYVRAIKTNPVRTKALSTGLIAILGDLLAQKISQRGDGQFVLDMRRSASVGIWGLLALGPALHYWYGILDRLFLGRYAVISKLLSDQLLFAPVCNTAFMLGVGSLEGNPFSEVSKTVREKFWPSTKANWTLWPAAQLLNFSLVPKTFQIVYVNCVALVWSVILAYIAHDE 313          
BLAST of Ggra1472.t1 vs. uniprot
Match: M2Y2T8 (Peroxisomal membrane protein-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2T8_GALSU)

HSP 1 Score: 153 bits (387), Expect = 1.120e-40
Identity = 72/174 (41.38%), Postives = 108/174 (62.07%), Query Frame = 0
Query:  168 ALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQ-KYSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHS 340
            +L   Y+ A+   PILTKAITTS++    D++AQ L Q G + F W++RRT ++  WG  FMGP  H W+  L+RLF   +++ + K+I DQ   A FFN  F +G G LEGH++  + + +R K W  M ANW +WP  Q I F+ +P   +V++VN V ++W + F  ++HS
Sbjct:  114 SLYLSYISALEERPILTKAITTSLINAFSDLVAQWLEQRGQSLFHWNIRRTFALGFWGFIFMGPFFHNWYLILERLFPSGRWAFLKKIILDQTFAAAFFNITFFLGTGFLEGHNWHLIVDKLRHKFWPTMYANWRVWPLVQCITFTVIPLTFRVLWVNVVTVMWVIYFSSLAHS 287          
BLAST of Ggra1472.t1 vs. uniprot
Match: A0A6A5BU89 (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BU89_NAEFO)

HSP 1 Score: 138 bits (348), Expect = 6.710e-36
Identity = 70/196 (35.71%), Postives = 107/196 (54.59%), Query Frame = 0
Query:  173 YLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQ------------IGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSV-------------ICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNE 343
            YL  +   PILTK+I++S++  LGDVL Q+L                T GF  D  RTL ++ +G+  +GPTLH W+  LDR   +KY V               +++ DQ LFAPF    F+  +G +EG SF+ ++  ++  +W  +  NW +WPAAQ +NF+ VP   +V++VN VA++WN    ++ H   E
Sbjct:    9 YLNMLETRPILTKSISSSILVGLGDVLTQTLEHNHQXXXXXXXXXXXTTGFTLDWVRTLKMASFGIIMIGPTLHLWYKFLDRFVAKKYPVGYVLSNTERTLNAARQMLVDQTLFAPFALFQFLAYMGAIEGKSFDSIAEKMKHDMWPTLVVNWYIWPAAQMLNFTLVPLQYRVLFVNSVAILWNAYLSHVQHKDLE 204          
BLAST of Ggra1472.t1 vs. uniprot
Match: A0A8J4UQV3 (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UQV3_9MYCE)

HSP 1 Score: 133 bits (335), Expect = 3.830e-34
Identity = 70/185 (37.84%), Postives = 111/185 (60.00%), Query Frame = 0
Query:  173 YLRAMSRNPILTKAITTSVMAFLGDVLAQ---------SLSQIGTNG-----FEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLF--TQKYSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSK 341
            YL  + + P+ TK+++T V+   GD+LAQ         SL++   N      F+ D +R L+++  G+ F GP LHYW+++LD++   + K   I K++ DQ +FAP   + FM  + T+ G S  +    ++  L+ AMKANWMLWPAAQ INFS VP NL+V+Y + V++ WN+   ++ H +
Sbjct:    8 YLHLLDKYPLTTKSLSTGVLMGTGDILAQRIDFHFKQQSLNKDNNNTNDDNRFKIDYQRVLTMTSVGVLFSGPVLHYWYTSLDKIVVGSGKTVYIKKMLLDQGVFAPIVISCFMGIMNTIHGKSLADTEQKIKNDLFYAMKANWMLWPAAQLINFSLVPPNLRVLYTSVVSIFWNIFLSHLGHKE 192          
BLAST of Ggra1472.t1 vs. uniprot
Match: M2Y5Q9 (Peroxisomal membrane MPV17/PMP22-like protein isoform 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5Q9_GALSU)

HSP 1 Score: 132 bits (332), Expect = 8.930e-34
Identity = 70/183 (38.25%), Postives = 102/183 (55.74%), Query Frame = 0
Query:  166 LAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQK-----YSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNE 343
            +A + A Y  A++ NP+  K +T+     LGD++AQS   +  N   WD  RT   S +GLC  GP  HYW+  LDR           +V  K   DQLL+AP F + F   + T+EGH  ++V+  V+TKLW  MK NW +WP A  INF FVP + +++Y+N V + +N     ++ SK +
Sbjct:    1 MAGIWARYNAALTANPLKVKTLTSFFGFTLGDLIAQSPDMLSGN--PWDYMRTARFSAFGLCIHGPIGHYWYQFLDRTVMTNAPKSGLAVATKTAIDQLLWAPIFTSIFFSFMKTVEGHP-DQVTEEVKTKLWPTMKVNWGVWPLAHLINFRFVPSSQRILYINSVQIGYNTFLSTMAASKTK 180          
BLAST of Ggra1472.t1 vs. uniprot
Match: D8TGV3 (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TGV3_VOLCA)

HSP 1 Score: 134 bits (337), Expect = 1.580e-33
Identity = 80/210 (38.10%), Postives = 119/210 (56.67%), Query Frame = 0
Query:  141 GGSGGSGRGDDEKFNGDGGKPN--DGLLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSVIC--KLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNEAIA 346
            GG GG      +  +G  G+P+   G    L A Y+  +  NP+ TKA+T +++  LGD+  Q   +    G +WD+RRT   +  GL  +GPTLHYW+S L+RL   + +     +L+ DQ +FAP F   F+  + T+EG S   V + +   L   +K NW+LW  AQ++NF FVP NLQV+  N VAL+WN    Y+S   ++A+A
Sbjct:   64 GGGGGGSTAGKQVGSGGSGEPHKPSGSSGGLWAWYMNCLETNPLFTKALTCALLNALGDIFCQFFIE----GGKWDIRRTSIFTFMGLALVGPTLHYWYSLLNRLIPARGATGAGLQLLLDQGVFAPLFLATFISVLFTIEGKS-HLVRSKLEQDLLETVKVNWVLWIPAQYLNFRFVPPNLQVLTANIVALIWNT---YMSFQSHKAVA 265          
BLAST of Ggra1472.t1 vs. uniprot
Match: A0A150G683 (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G683_GONPE)

HSP 1 Score: 132 bits (331), Expect = 2.660e-33
Identity = 71/185 (38.38%), Postives = 108/185 (58.38%), Query Frame = 0
Query:  164 GLLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKY--SVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNEAIA 346
            G    L A Y+  +  NP+LTKA+T +++  LGD+  Q   + G+    WD +RT + +  GL  +GPTLHYW++ L+++   +    V  +L+ DQ +FAP F   F+  + T+EG   + +   +   LW  +K NW+LW  AQF NF FVP NLQV+  N VAL+WN    Y+S   ++A+A
Sbjct:   35 GSSGGLWAWYMSCLEANPLLTKALTCALLNALGDIFCQLFIEAGS----WDAKRTGTFTFMGLALVGPTLHYWYTLLNKMVPARGLGGVGLQLLLDQAVFAPVFLGTFISVLFTIEGKP-QLIRAKLEQDLWETVKVNWVLWIPAQFFNFRFVPPNLQVLTANVVALIWNT---YMSFQSHKAVA 211          
BLAST of Ggra1472.t1 vs. uniprot
Match: A0A5J4YU56 (Protein SYM1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU56_PORPP)

HSP 1 Score: 134 bits (336), Expect = 3.550e-33
Identity = 67/180 (37.22%), Postives = 103/180 (57.22%), Query Frame = 0
Query:  166 LAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQ-----IGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSVICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHS 340
            L  LMA Y   +   P+LTK     V+  +GD+LAQ L++      G   F  ++RRTL + +     + P LH W+  L+R      +V+  ++ DQL+FAP+ N+AFM+ +G L G    ++   ++ +LW  M  NW LWPAAQ +NF FVP + QV+ VN  A VW+++  Y +H+
Sbjct:  112 LEKLMAWYAACVRDKPLLTKVSVALVLNMIGDILAQYLTRDSGPSSGRGSFRLNLRRTLEVGLIAAVVIAPNLHGWYLFLNRAIPSG-NVVQMVLLDQLVFAPYLNSAFMLALGALNGKKPAQIRRTIKDRLWPTMLMNWQLWPAAQALNFMFVPPDFQVLCVNLTAFVWSVLLSYSAHA 290          
BLAST of Ggra1472.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF33EC (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF33EC)

HSP 1 Score: 130 bits (328), Expect = 5.570e-33
Identity = 68/206 (33.01%), Postives = 109/206 (52.91%), Query Frame = 0
Query:  165 LLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLAQSLSQ-------------IGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSV-------------ICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANWMLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNEA 344
            + A     YL  +   PILTK++++S++  LGDVL Q+L                    F  D  RTL ++ +G+  +GPTLH W+  LDR   +KY V               ++  DQ +FAPF    F+  +GT+EG SF+ +   ++  +W  +  NW +WPA Q +NF+ VP   +V++VN V+++WN    Y+SH +++A
Sbjct:    1 MFARFSRWYLNMLETRPILTKSVSSSILVGLGDVLTQTLEHDHHKHXXXXXXXXXXXTSFTLDYVRTLKMASFGIVLIGPTLHLWYKFLDRFVAKKYPVGYILSKTERTLNAARQMFVDQTIFAPFALFQFLAYMGTIEGKSFDSILEKMKQDMWPTLIVNWYIWPAVQMLNFTLVPLQYRVLFVNSVSILWNA---YLSHVQHKA 203          
The following BLAST results are available for this feature:
BLAST of Ggra1472.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0E73.810e-9254.35PXMP2/4 family protein 2 n=1 Tax=Gracilariopsis ch... [more]
R7QQZ31.440e-6958.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2Y2T81.120e-4041.38Peroxisomal membrane protein-related protein n=1 T... [more]
A0A6A5BU896.710e-3635.71Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
A0A8J4UQV33.830e-3437.84Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
M2Y5Q98.930e-3438.25Peroxisomal membrane MPV17/PMP22-like protein isof... [more]
D8TGV31.580e-3338.10Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A150G6832.660e-3338.38Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A5J4YU563.550e-3337.22Protein SYM1 n=1 Tax=Porphyridium purpureum TaxID=... [more]
uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF33EC5.570e-3333.01uncharacterized protein n=1 Tax=Naegleria lovanien... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 274..333
e-value: 2.6E-24
score: 85.2
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 168..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..157
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 202..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..258
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 338..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..276
NoneNo IPR availableTMHMMTMhelixcoord: 318..340
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 219..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:187142..188182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1472.t1Ggra1472.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 187142..188182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1472.t1 ID=Ggra1472.t1|Name=Ggra1472.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=347bp
MNCILASRFSRVSVAFCTAPTGTARHVSLELRTVLNQTSLSFRSERKFVR
KTCLPHGLGRVNQLGVHAGRLSQAPLHTFSTSRTPSKQPICAFDKVPKAL
PDWWDDEEEEDTTDEFHALHFENANPQVALGSGSGSLASNGGSGGSGRGD
DEKFNGDGGKPNDGLLAALMAMYLRAMSRNPILTKAITTSVMAFLGDVLA
QSLSQIGTNGFEWDMRRTLSISVWGLCFMGPTLHYWFSTLDRLFTQKYSV
ICKLITDQLLFAPFFNTAFMMGVGTLEGHSFEEVSNNVRTKLWSAMKANW
MLWPAAQFINFSFVPKNLQVVYVNCVALVWNMIFMYISHSKNEAIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22