Ggra1456.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1456.t1
Unique NameGgra1456.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length419
Homology
BLAST of Ggra1456.t1 vs. uniprot
Match: A0A2V3J1L2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1L2_9FLOR)

HSP 1 Score: 471 bits (1213), Expect = 7.590e-162
Identity = 228/420 (54.29%), Postives = 314/420 (74.76%), Query Frame = 0
Query:    1 MSFVLGNDE-RASAYVSRTDGSKSKVNLNYVYEDMDVIGSNLPRGKRELLAYDITPYIFMIEMFSRSRSSSEFTLHCLSSNPGSCGQHEQDSIENSSLNPMLLIDARISNSKEYHWPKSLLRLIRNSVMGRLKILDMKDLYGWKVRSTASCFRSILSTNVQTGDMSPKTFAGTNRFFSLNGLVRNSTGRVQ-NSLTPCICKVLLLNRHGKRFIVGGDTLTRAITLYGTKVASIDPTVRIEAEEVFFENSSFHEQVSIIQESSIVVASHGDANSNFMFLKPDSYVFELVPYGYKSDTFRNISVAYGARYEQITSQADNEVFEACVQHYNSNGGVSLTQYLRNWEKDARMYLNETIQKKRNVWSDFEIPEDEGQGTSTSLRNLKECASYQRLSVDVKDLARKVALAAIRQCRVQGDLSLLDQ 418
            +S+VL  D   +S  + R+DGS S V L   +  +DV+G+ LPRGKR+LL +D+TP I M+ MFS     ++ T+ CLS +P SC ++     + S  NP++LID++IS++K+Y WPKSL+RL+RNS++GRLKI+DMK++YGW+VRSTASCFRS++ST +QTGD+ P  F+  + FF  N L RN TGR+  NS  PCI KVL+LNRHG+RF++G D L RA+   G K+  ID   RIEAEEVFFEN SFHEQVSI+QES++V+A+HGDAN+NFMFL+P + V E++PYGY SD ++NIS AYGARYE + SQAD EVF ACV+H+N++   S+  YLR WE  AR + N++I+++ N+ S++EIP+ E       L+NL+ECASYQR SVD+KDLAR++ L   +QC V+GDLS+L++
Sbjct:   20 VSYVLNKDVWHSSITIRRSDGSTSNVALQDDFRHLDVVGAYLPRGKRDLLVHDVTPSILMMGMFSSPIQPAQHTVTCLSRDPESCERYRFTPPQESPFNPLMLIDSQISDTKDYLWPKSLMRLLRNSMLGRLKIVDMKEVYGWRVRSTASCFRSMISTTIQTGDVPPDAFSDNDNFFLRNQLSRNMTGRLSDNSTEPCISKVLVLNRHGRRFMIGIDYLIRAVMALGKKLTEIDSLTRIEAEEVFFENCSFHEQVSIVQESNVVIAAHGDANANFMFLRPQTKVLEIMPYGYASDMYKNISNAYGARYELVRSQADIEVFAACVRHFNADENASVNDYLRGWEDKARQFWNDSIRQRANIASNYEIPKVEELEGQIKLKNLRECASYQRTSVDIKDLARRIVLEVAQQCHVRGDLSVLNE 439          
BLAST of Ggra1456.t1 vs. uniprot
Match: A0A1X6PD11 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD11_PORUM)

HSP 1 Score: 219 bits (557), Expect = 5.350e-62
Identity = 119/399 (29.82%), Postives = 215/399 (53.88%), Query Frame = 0
Query:   24 KVNLNYVYEDMDVIGSNLPRGKRELLAYDITPYIFMIEMFSRSRS-SSEFTLHCLSSNPGSCGQHEQDSIENSSLNPMLLIDARISNSKEYHWPKSLLRLIRNSVMGRLKILDMKDLYGWKVRSTASCFRSILSTNVQTGDMSPKTFAGTNRFFSLNGLVR--NSTGR-----VQNSLTPCICKVLLLNRHGKRFIVGGDTLTRAITLYGTKVASIDPTVRIEAEEVFFENSSFHEQVSIIQESSIVVASHGDANSNFMFLKPDSYVFELVPYGYKSDTFRNISVAYGARYEQITSQADNEVFEACVQHYNSNGGVSLTQYLRNWEKDARMYLNETIQKKRNVWSDFEIPEDEGQGTSTSLRNLKECASYQRLSVDVKDLARKVALAAIRQCRVQGDLS 414
            +++L   + + D+ G + P      +A D++P + ++++  R+ + +++ T  C+     +C  +E  ++  + ++P L++ +RI+  K+  W K  LRL+RN+  G   +LD  DLYGWKVR  A+C RS+++T +    M    F   +  F++N + R   +TG      + ++   C  +V++LNR G+R++VG   L  A+           P V + AE VFFEN+SFHEQ+S++QE+++VVASHG   +N +FL+P S + E++P+G K+  F +++  Y      +T+  D++VF +C+ H+N +G  +    L  W   A  +             D +   D      T ++N+ +CA YQRL+ +VK++A       +  C V   +S
Sbjct:  153 RISLTDGHNETDLFGVDPPGETMPAIATDLSPVLLLMDVLERTAAHAAQLTRECVVEGASACPDNETAAVVAAGVDPGLVVTSRITMQKDEKWVKGFLRLVRNAFFGSFSLLDAADLYGWKVRGVAACARSVVTTGMTADVMPAGLFPAEHFLFAVNQISRVPRATGAAVASALASAARACTVRVMVLNRFGQRYMVGDYALRSAVAAEAXXXXXTAPGVTLAAEVVFFENASFHEQISMMQETNVVVASHGAGVANLLFLRPGSVLVEVLPFGIKASPFADLARLYDVVRLPLTAMPDDDVFRSCIAHFNKDGPAT-DALLARWAAAATSFREGGGGPAPG--GDLDWGTDPAAAADTGIQNVLQCAGYQRLTFNVKEVAALAVTRGLAHCGVDRVVS 548          
BLAST of Ggra1456.t1 vs. uniprot
Match: M2WW31 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WW31_GALSU)

HSP 1 Score: 71.2 bits (173), Expect = 1.000e-9
Identity = 79/357 (22.13%), Postives = 149/357 (41.74%), Query Frame = 0
Query:   35 DVIGSNLPRGKRELLAYDITPYIFMIEMFSRSRSSSEFTLHCLSSNPGSCGQHEQDSIENSSLNPMLLIDARISNSKEYHWPKSLLRLIRNSVMGRLKILDMKDLYGWKVRSTAS--CFRSILSTNVQTGDMSPKTFAGTNRFFSLNGLVRNSTGRVQNSLT------PCICKVLLLNR------------HGKRFIVGGDTLTRAITLYGTKVASIDPTVRIEAEEVFFENSSFHEQVSI---IQESSIVVASHGDANSNFMFLKPDSYVFELVPYGYKSDTFRNISVAYGARYEQITSQADNEVFEACVQHYNSNGGVSLTQYLRNWEKDARMYLNETIQKKRNVWSDFEIPEDE 368
            D+IG+ + R +   L  D    +        S ++  ++  C+SS    C      ++  S+L P+LL   R    KE  W    L+ +  S +             WK  S  S  CFRS+  + ++   +     +  + FF  NG++R    R+++S         C+  + L N             H   F    + + R      T+    D  +R+    V F  +   + +S    +Q   +VV  H  ANS F+ L+P++ V E++P+ Y +  F+ ++++ G  Y  ++S  D E F  C+  Y  +   SL+Q ++ + ++A  +     Q+  ++  D E  + +
Sbjct:  141 DLIGTQVLRWQLPHLIADTIWILLWRHFIYYSENTKSWSFTCVSSASRPC----ITTLFWSALEPVLLNYQR---PKEEDWTSQYLQQVLLSTIPTQ----------WKTISPESQGCFRSVTFSRLRPAHIPKHVLSQEDIFFLENGILRED--RLKSSFQNAKDTGKCMITIALKNNSVGYSSNRLNSFHENLFEQVANLIPRLALESTTETYRQDINIRL----VDFHTNDLDDWISAKEKLQAVDVVVTDHSIANSQFLLLRPNTTVIEVLPFSYSAVMFKELALSLGLDYHSVSSNPDEETFLDCLFRYEQDQH-SLSQLVQAYRQEAENWHRGIYQQTLHL-DDLETTDKQ 472          
BLAST of Ggra1456.t1 vs. uniprot
Match: A0A7S1ERQ8 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERQ8_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 2.890e-9
Identity = 64/266 (24.06%), Postives = 125/266 (46.99%), Query Frame = 0
Query:  112 EYHWPKSLLRLIRNSVMGRLKILDMKDLYGWKVRSTASCFRSILSTNVQTGDMSPKTFAGTNRFFSLNGLVRNSTGRVQNSLTPCICKVLLLNRH----------GKRFIVGGDTLTRAITLYGTKVASIDPTVRIEAEEVFFENSSFH--EQVSIIQESSIVVASHGDANSNFMFLKPDSYVFELVPYGYKSDTFRNISVAY-GARYEQITSQADNEVFEACVQHYNSNGGVSLTQYLRNWEKDARMYL-NETIQKKRNVWSDFE 363
            +Y W   LLR   +S+    ++L  K +   K   T  CFRS++ +  Q     P T        SL   +R    R +N+ T    +V++L+++           +R +V    L   I     K  SID  V+ +   V  E+  +H  E   ++Q + IVV+ +G   S+  F++ +S +  + P+GY   ++ N +  Y G R+E I ++ D E F+ C++ Y+S+     ++++  +E    +++ N++   +  + + +E
Sbjct:  174 DYFWAYDLLRAF-SSIQHPPRVLTSKMISKRKRTKTPICFRSVIVS--QLPSQFPNTLLDN---LSLWKNIRFEK-RARNAQTRSSIRVVILDQNPEKKTSHSYGSRRALVNIGGLQEEIIQRARKELSID--VKFKKFIVNVEDKEYHPLEMERLVQNADIVVSGYGPQLSSGFFMRRESVLVAVFPFGYMPTSYLNFTSKYTGIRFESIVAEPDLETFQECIRSYHSSSSQH-SEWISKFEARRVLFMKNQSTISQSGIQTGYE 429          
The following BLAST results are available for this feature:
BLAST of Ggra1456.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J1L27.590e-16254.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PD115.350e-6229.82Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2WW311.000e-922.13Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S1ERQ82.890e-924.06Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007657Glycosyltransferase 61PFAMPF04577Glyco_transf_61coord: 166..282
e-value: 1.5E-7
score: 31.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:136004..137260 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1456.t1Ggra1456.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 136004..137260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1456.t1 ID=Ggra1456.t1|Name=Ggra1456.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=419bp
MSFVLGNDERASAYVSRTDGSKSKVNLNYVYEDMDVIGSNLPRGKRELLA
YDITPYIFMIEMFSRSRSSSEFTLHCLSSNPGSCGQHEQDSIENSSLNPM
LLIDARISNSKEYHWPKSLLRLIRNSVMGRLKILDMKDLYGWKVRSTASC
FRSILSTNVQTGDMSPKTFAGTNRFFSLNGLVRNSTGRVQNSLTPCICKV
LLLNRHGKRFIVGGDTLTRAITLYGTKVASIDPTVRIEAEEVFFENSSFH
EQVSIIQESSIVVASHGDANSNFMFLKPDSYVFELVPYGYKSDTFRNISV
AYGARYEQITSQADNEVFEACVQHYNSNGGVSLTQYLRNWEKDARMYLNE
TIQKKRNVWSDFEIPEDEGQGTSTSLRNLKECASYQRLSVDVKDLARKVA
LAAIRQCRVQGDLSLLDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007657Glycosyltransferase_61