Ggra1453.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1453.t1
Unique NameGgra1453.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Homology
BLAST of Ggra1453.t1 vs. uniprot
Match: A0A2V3J0C8 (Transcription initiation factor TFIID subunit 14 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0C8_9FLOR)

HSP 1 Score: 389 bits (998), Expect = 5.300e-136
Identity = 191/216 (88.43%), Postives = 199/216 (92.13%), Query Frame = 0
Query:    1 MKRVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGEPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEERAELIRQISAKGGRIS 216
            MKRVKGVNLHIPVVHGS+AKHLGDKGTESRSHEWTVYLRPLQ ADLSHFI+HVEFVLHESFEPQ RRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFE +GEPSPDPV+SE+YDEIVFQDPPE LH LLKTIPHGPNLRIKQPSYPI  YFKDFSGAES DLRKLEHARR LREET+KRQ +YE LEEERA L+RQIS    R S
Sbjct:    1 MKRVKGVNLHIPVVHGSYAKHLGDKGTESRSHEWTVYLRPLQAADLSHFIKHVEFVLHESFEPQTRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFETMGEPSPDPVVSEHYDEIVFQDPPEKLHSLLKTIPHGPNLRIKQPSYPISNYFKDFSGAESNDLRKLEHARRTLREETIKRQAKYERLEEERAGLLRQISGYDSRAS 216          
BLAST of Ggra1453.t1 vs. uniprot
Match: R7QL70 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL70_CHOCR)

HSP 1 Score: 300 bits (767), Expect = 5.320e-99
Identity = 144/217 (66.36%), Postives = 181/217 (83.41%), Query Frame = 0
Query:    1 MKRVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLF-ENVGEPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEERAELIRQISAKGGRIS 216
            MKRV+G   H+PVVHGS+AK+L D+GTE+RSH WTVYLRP+  AD+SHFI HV+FVLHESF PQVRRVTEMPYEV EYGWGEFE++IRVFF D +EKPV+ +HPLRLF E   EP+ DPVISE+YDEIVFQDP E L  +L+T PHGP ++IKQ  Y   AYFKDFS AES DL+K+E AR++LREET++++ RYE+L+ ER+ L+R+I+++GGR +
Sbjct:  127 MKRVRGTVFHVPVVHGSYAKYLQDRGTEARSHHWTVYLRPVNNADISHFIHHVDFVLHESFNPQVRRVTEMPYEVSEYGWGEFEIIIRVFFNDTAEKPVDLYHPLRLFVERTEEPTLDPVISEFYDEIVFQDPSEKLLDMLQTTPHGPQIQIKQSMYS--AYFKDFSNAESVDLKKIEEARKRLREETIRKRERYEKLDIERSALVREINSRGGRTT 341          
BLAST of Ggra1453.t1 vs. uniprot
Match: M2VTK6 (YEATS domain-containing protein 4 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTK6_GALSU)

HSP 1 Score: 176 bits (446), Expect = 4.500e-52
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGEPSP--DPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEERAELIRQISAKG 212
            R KG  + +PV+ GS A  LG +  E  SH WT Y+R  +  DLS+FIR+VEF LHESF P  R VT  P+E+ E GWGEF+++IR+FF D  E P+E  HPLRLF N  +     +PV++EYY+E+VFQDPPE L  +L+    GP   ++     +  YF DF+  E+ DL K++HA+  +R + +    R +E++EER +L  +IS  G
Sbjct:   10 RTKGATVAVPVIQGSIAFWLGPEADEWHSHRWTAYIRGPKNEDLSYFIRYVEFHLHESFHPSKRVVTRPPFELTETGWGEFDLIIRLFFIDNLESPIELVHPLRLFPNPPKDQSVEEPVVNEYYEELVFQDPPEELLAILRM---GPQRTVETE---LQKYFLDFTRQEAQDLEKIKHAKDMIRTKLLAINERSKEIDEERKQLEEEISRIG 215          
BLAST of Ggra1453.t1 vs. uniprot
Match: A0A6T6BSY7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BSY7_9RHOD)

HSP 1 Score: 173 bits (438), Expect = 2.720e-50
Identity = 106/220 (48.18%), Postives = 137/220 (62.27%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPA--DLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFE---NVGEPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGP-NLRIKQPSYP--IPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEERAELIRQISAKGGR 214
            R++G  L IPVV GS A   G K    R+H+WTVYLR  +PA  DL + ++ VEF+LH SF P  R V + PYEV E+GWGEFEV IRV   +  EKPVE FHPLRLF    N  + +  PV+SE+YDEIV QDPPE L  L+K    G  + ++  PS    +  ++ D SG E  DL  +  ARRK++EE   R  RY+EL++ER  L  +I+  GGR
Sbjct:   44 RLRGELLVIPVVTGSVAIWQGKKAPADRTHKWTVYLRG-EPATVDLRYAVQRVEFLLHSSFSPPTRVVEQPPYEVTEFGWGEFEVTIRVHLLNGLEKPVELFHPLRLFHGLPNHQDLNRTPVVSEFYDEIVIQDPPEQLFKLVKGTGGGAVHAKVLPPSKVSNLAVHYTDMSGKEREDLEAITAARRKIQEEVDGRHLRYQELDKEREGLAMEITKLGGR 262          
BLAST of Ggra1453.t1 vs. uniprot
Match: A0A5J4YYX1 (Transcription initiation factor TFIID subunit 14b n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYX1_PORPP)

HSP 1 Score: 162 bits (409), Expect = 1.140e-46
Identity = 89/209 (42.58%), Postives = 132/209 (63.16%), Query Frame = 0
Query:    1 MKRVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGEP-SPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEERAELIRQI 208
            MKRVKG     P+V+GS +   G    + ++H W +++R L   DLS+F+ HVEFVLHE+ +P VR V E PYE+++YGWGEFEV+IR+ F+D  EKP + +H L+LF   GE  +  PV+S++YDE+VF +PPE L  +L+    G +   K+ +  +  +  DF   E  D  K++ ARR ++  + K Q R EEL++E A L  Q+
Sbjct:    1 MKRVKGAVFVQPIVYGSVSTWQGPDADQFKAHHWYIFVRGLYHEDLSYFVDHVEFVLHETLQPPVRIVREPPYEIEDYGWGEFEVIIRIHFKDKLEKPADMYHMLKLFSLTGEKLTTTPVVSDHYDELVFIEPPEKLLSILEK---GTD---KKVTSALGKFTSDFIAQEQEDTSKVQAARRLVQAHSHKLQGRLEELDKEAALLRYQV 203          
BLAST of Ggra1453.t1 vs. uniprot
Match: YEATS domain-containing protein 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D669E (YEATS domain-containing protein 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D669E)

HSP 1 Score: 154 bits (389), Expect = 9.850e-44
Identity = 75/123 (60.98%), Postives = 95/123 (77.24%), Query Frame = 0
Query:   68 VTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVG-EPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMK 189
            VTEMPYE+ EYGWGEF+ +IR++F DP+EK VEFFHPL+LF   G EPS  PV+ E+YDEIVFQDP E L GLLK+ PHGP  R+K     +  Y++DFS +ES DL+K+E AR+K+R ET+K
Sbjct:   66 VTEMPYEISEYGWGEFDAIIRLYFHDPAEKVVEFFHPLKLFPGGGQEPSRKPVVHEFYDEIVFQDPSERLLGLLKSTPHGPGTRLKTSL--LAPYYRDFSSSESDDLKKIEEARKKVRVETLK 186          
BLAST of Ggra1453.t1 vs. uniprot
Match: E9G0X1 (Uncharacterized protein n=5 Tax=Daphnia TaxID=6668 RepID=E9G0X1_DAPPU)

HSP 1 Score: 152 bits (384), Expect = 1.220e-42
Identity = 74/146 (50.68%), Postives = 104/146 (71.23%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGE--PSPDPVISEYYDEIVFQDPPETLHGLLKTIPH 145
            R KGV L  PVV+G+ AK+ G K  E   +H+WTVY+RP +  D+S +++ + F LH+S+  Q R +T+ PYEV E GWGEFE+VI+++FQDP+E+PV F+H L+LF+N  E      PV+SE+Y+EIVFQ+P   +H LL  IPH
Sbjct:   13 RTKGVILK-PVVYGNVAKYFGKKREEDGHTHQWTVYVRPFENEDMSTYVKKINFKLHDSYANQNRVLTKPPYEVTETGWGEFEIVIKIYFQDPNERPVTFYHILKLFQNSPEIVVGKKPVVSEFYEEIVFQEPTVMMHQLLTNIPH 157          
BLAST of Ggra1453.t1 vs. uniprot
Match: YEATS domain-containing protein 4-like n=1 Tax=Daphnia pulex TaxID=6669 RepID=UPI001EE14C2D (YEATS domain-containing protein 4-like n=1 Tax=Daphnia pulex TaxID=6669 RepID=UPI001EE14C2D)

HSP 1 Score: 149 bits (376), Expect = 9.010e-41
Identity = 73/145 (50.34%), Postives = 103/145 (71.03%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGE--PSPDPVISEYYDEIVFQDPPETLHGLLKTIP 144
            R KGV L  PVV+G+ AK+ G K  E   +H+WTVY+RP +  D+S +++ + F LH+S+  Q R +T+ PYEV E GWGEFE+VI+++FQDP+E+PV F+H L+LF+N  E      PV+SE+Y+EIVFQ+P   +H LL  IP
Sbjct:   70 RTKGVILK-PVVYGNVAKYFGKKREEDGHTHQWTVYVRPFENEDMSTYVKKINFKLHDSYANQNRVLTKPPYEVTETGWGEFEIVIKIYFQDPNERPVTFYHILKLFQNSPEIVVGKKPVVSEFYEEIVFQEPTVMMHQLLTNIP 213          
BLAST of Ggra1453.t1 vs. uniprot
Match: A0A0N8CBQ0 (YEATS domain-containing protein n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CBQ0_9CRUS)

HSP 1 Score: 145 bits (367), Expect = 1.560e-40
Identity = 70/145 (48.28%), Postives = 102/145 (70.34%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFENVGE--PSPDPVISEYYDEIVFQDPPETLHGLLKTIP 144
            R KGV +  P+V+G+ AK+ G K  E   +H+WTVY+RP +  D+S +++ + F LH+S+  Q R +T+ PYEV E GWGEFE+VI+++FQDP+E+PV  +H L+LF+N  E      PV+SE+Y+EIVFQ+P   +H LL  IP
Sbjct:   13 RTKGVIIK-PIVYGNVAKYFGKKREEDGHTHQWTVYVRPFENEDISTYVKKINFKLHDSYANQNRVLTKPPYEVTETGWGEFEIVIKIYFQDPNERPVTLYHILKLFQNSPEIVVGKKPVVSEFYEEIVFQEPTVMMHQLLTNIP 156          
BLAST of Ggra1453.t1 vs. uniprot
Match: F6PHR7 (Uncharacterized protein n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6PHR7_CIOIN)

HSP 1 Score: 146 bits (368), Expect = 3.360e-40
Identity = 77/188 (40.96%), Postives = 119/188 (63.30%), Query Frame = 0
Query:    3 RVKGVNLHIPVVHGSFAKHLGDKGTES-RSHEWTVYLRPLQPADLSHFIRHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVEFFHPLRLFE---NVGEPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLRIKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREE 186
            RVKGV +  P+V+G+ A++ G K  E   +H WTVYL+P    D+S +++ ++F LHES+   +R VT+ PYEV E GWGEFE+VI++FF DP+++P+  +H LRLF+   N+   +   VISE+YDE+VFQDP   +H LL +         +Q +     +  DF   E+  L +L+ A++K++ E
Sbjct:   16 RVKGVCIIKPIVYGNSARYFGKKREEDGHTHTWTVYLKPYHNEDMSVYVKKIQFKLHESYANPIRVVTKPPYEVTETGWGEFEIVIKIFFHDPNDRPLTIYHGLRLFQTENNIIVGNKKAVISEFYDEMVFQDPSTMMHSLLTSN--------RQLTLGAHKHETDFEEKEATTLAQLQSAKQKIQNE 195          
The following BLAST results are available for this feature:
BLAST of Ggra1453.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0C85.300e-13688.43Transcription initiation factor TFIID subunit 14 n... [more]
R7QL705.320e-9966.36Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2VTK64.500e-5244.81YEATS domain-containing protein 4 n=1 Tax=Galdieri... [more]
A0A6T6BSY72.720e-5048.18Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YYX11.140e-4642.58Transcription initiation factor TFIID subunit 14b ... [more]
YEATS domain-containing protein 4-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D669E9.850e-4460.98YEATS domain-containing protein 4-like n=1 Tax=Mer... [more]
E9G0X11.220e-4250.68Uncharacterized protein n=5 Tax=Daphnia TaxID=6668... [more]
YEATS domain-containing protein 4-like n=1 Tax=Daphnia pulex TaxID=6669 RepID=UPI001EE14C2D9.010e-4150.34YEATS domain-containing protein 4-like n=1 Tax=Dap... [more]
A0A0N8CBQ01.560e-4048.28YEATS domain-containing protein n=1 Tax=Daphnia ma... [more]
F6PHR73.360e-4040.96Uncharacterized protein n=2 Tax=Ciona intestinalis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..214
NoneNo IPR availablePANTHERPTHR47573PROTEIN AF-9 HOMOLOGcoord: 3..208
NoneNo IPR availableCDDcd16910YEATS_TFIID14_likecoord: 9..136
e-value: 1.04491E-62
score: 189.328
IPR038704YEATS superfamilyGENE3D2.60.40.1970YEATS domaincoord: 4..153
e-value: 5.0E-42
score: 145.6
IPR005033YEATSPFAMPF03366YEATScoord: 31..107
e-value: 1.6E-27
score: 95.3
IPR005033YEATSPROSITEPS51037YEATScoord: 3..143
score: 49.462032

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:131589..132239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1453.t1Ggra1453.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 131589..132239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1453.t1 ID=Ggra1453.t1|Name=Ggra1453.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MKRVKGVNLHIPVVHGSFAKHLGDKGTESRSHEWTVYLRPLQPADLSHFI
RHVEFVLHESFEPQVRRVTEMPYEVQEYGWGEFEVVIRVFFQDPSEKPVE
FFHPLRLFENVGEPSPDPVISEYYDEIVFQDPPETLHGLLKTIPHGPNLR
IKQPSYPIPAYFKDFSGAESADLRKLEHARRKLREETMKRQTRYEELEEE
RAELIRQISAKGGRIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038704YEAST_sf
IPR005033YEATS