Ggra1448.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1448.t1
Unique NameGgra1448.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
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BLAST of Ggra1448.t1 vs. uniprot
Match: A0A2V3IEH6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEH6_9FLOR)

HSP 1 Score: 229 bits (583), Expect = 6.610e-72
Identity = 136/247 (55.06%), Postives = 167/247 (67.61%), Query Frame = 0 
Query:    1 MNLAQSSVFNSSLQLRRNVPRKTARQANRAAQLESSPTLVSDILLGRERDLQDRLHRVKNDLRLIAFTRATTKSQSTRRACLLRAAIHSRRRRAIESRLGHVRKIREDALRVEALRSEAQWELERFGVGGIDEELDEVALREGWNHLVDEFEQVKGEVTEVSERLAEDWSGIDDTELEEEFDQEMRDSMGLKSSDDKLESTIEHNSLDRMQNPYDVTLSDDEGEEVEDGAPDRSEAQRVLDLLPVRR 247
            M+++++ +++ S Q+  N P      A    Q       VSDILL RERDL+DRL RVKNDLRL+AFTRATT+S STRRACLLRAAIHSRRRRAIESRL HVR IR DALRVEALR + Q + ER     ID ELDE+ALREGWN + D FE+ K E+ +VSE L+ DW GIDD E EEE  +E   S+  +   D+LE  ++  S   MQNPYD+  SD + E++      RSE QRV DL PV+R
Sbjct:    1 MSVSRAVLYSRSTQVHHN-PHHALYHAFGRRQRRQPAYKVSDILLQRERDLEDRLQRVKNDLRLVAFTRATTQSASTRRACLLRAAIHSRRRRAIESRLSHVRAIRTDALRVEALREQMQMDSERRRPESIDIELDELALREGWNSVADAFEEQKREICQVSEILSRDWMGIDDAEFEEELVEESGPSIKREQPKDELEDLLDTESSAGMQNPYDIPTSDSDDEDMAQARDLRSEKQRVQDLEPVQR 246
The following BLAST results are available for this feature:
BLAST of Ggra1448.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEH66.610e-7255.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:117283..118026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1448.t1Ggra1448.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 117283..118026 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1448.t1 ID=Ggra1448.t1|Name=Ggra1448.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MNLAQSSVFNSSLQLRRNVPRKTARQANRAAQLESSPTLVSDILLGRERD
LQDRLHRVKNDLRLIAFTRATTKSQSTRRACLLRAAIHSRRRRAIESRLG
HVRKIREDALRVEALRSEAQWELERFGVGGIDEELDEVALREGWNHLVDE
FEQVKGEVTEVSERLAEDWSGIDDTELEEEFDQEMRDSMGLKSSDDKLES
TIEHNSLDRMQNPYDVTLSDDEGEEVEDGAPDRSEAQRVLDLLPVRR*
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