Ggra1440.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1440.t1
Unique NameGgra1440.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length253
Homology
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BLAST of Ggra1440.t1 vs. uniprot
Match: A0A2V3IJP6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJP6_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 3.230e-29
Identity = 121/201 (60.20%), Postives = 140/201 (69.65%), Query Frame = 0 
Query:    1 MSAKPPFDPADLLPKSYTPRSRASSSXXXXXXXXXXXXXXXXXXXXXXXXXPRAVPDRQR-SRAXXXXXXXXXXXXXXXXXXXXXXXXXXKFNRSRTNNVDHPVAELQRVRAMSPQQWAKESQRFVKHYLPLVERGIDIEPLVRANARAAAAAAGLNKPSREVPPLLIPPSAIPEYNGLL--------TPEELDAASCAPA 192
            MS++PPFDP DLLPK YTPRSR    XXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXX          F RS+T ++D P   L R   +SP++W +ES+ F KHYLPLV++GI+IEPLV ANARAAAAA GL KPSR VPPL+IPPSA+PEY  L         +P+ L AA+ + A
Sbjct:    1 MSSQPPFDPQDLLPKRYTPRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXXXXXRARPSSKRPSFTRSQTTSIDEPKPFLPRAHNLSPEEWKRESELFCKHYLPLVKQGINIEPLVLANARAAAAAQGLKKPSRAVPPLIIPPSALPEYKHLFPSDPSAPKSPQALAAAAVSAA 201
The following BLAST results are available for this feature:
BLAST of Ggra1440.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJP63.230e-2960.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:94170..95405 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1440.t1Ggra1440.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 94170..95405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1440.t1 ID=Ggra1440.t1|Name=Ggra1440.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=253bp
MSAKPPFDPADLLPKSYTPRSRASSSSSSSSASASAPSQPPSSSARHARH
APRAVPDRQRSRAGASAGASASAGASAARSPPRPPPRPPKFNRSRTNNVD
HPVAELQRVRAMSPQQWAKESQRFVKHYLPLVERGIDIEPLVRANARAAA
AAAGLNKPSREVPPLLIPPSAIPEYNGLLTPEELDAASCAPANAAAAAAA
AAAAAAAAAPPPPQPAPKPKPSASASQRTRAQRPALPSSSVMHPRAAPHY
PP*
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