Ggra1429.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1429.t1
Unique NameGgra1429.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length523
Homology
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A2V3IJK2 (Sentrin-specific protease 8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJK2_9FLOR)

HSP 1 Score: 345 bits (885), Expect = 1.130e-113
Identity = 171/216 (79.17%), Postives = 189/216 (87.50%), Query Frame = 0
Query:  291 PTPRVASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQRNSYDCGAYACKFAEDVVQCFLSKKQISSVYEKGTELHQDQIDQKRQEIGKLACRL 506
            P  R+ASLGDASLSVDDLALLVPPCWMND+LISFWCEHLRI+VL+NDSRVAI PPNLSFF+SLTDD E L QIA+ANNLK SELIILTVNDSR S V GNVASGTHWS+LAL+R  N AYY+DSLPHL NVKVS+VLL R+A+ML TS+ +FVELD PRQRNSYDCGA+AC FAEDVV+CFL  KQISSVY+ G +LH D IDQKRQ IGKLAC L
Sbjct:    6 PPSRIASLGDASLSVDDLALLVPPCWMNDKLISFWCEHLRINVLKNDSRVAIFPPNLSFFISLTDDEEELVQIATANNLKKSELIILTVNDSRQSGVTGNVASGTHWSVLALERSTNNAYYIDSLPHLPNVKVSKVLLGRMAKMLATSRPTFVELDAPRQRNSYDCGAFACMFAEDVVKCFLDGKQISSVYQAGFQLHSDAIDQKRQAIGKLACLL 221          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A2V3IJK5 (SEC14-like protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJK5_9FLOR)

HSP 1 Score: 326 bits (835), Expect = 3.510e-105
Identity = 156/287 (54.36%), Postives = 211/287 (73.52%), Query Frame = 0
Query:    1 MTSYFSMKWSSILPRSTFVQEASGSSLSGSDDIALDTFKQSSKPMLEDAVPRLSDEDPFRCLLVEQST-LRDDILLRVLRFNEMNVSKATHQLETTLNWRAHSRICSVGLDMVRGSSSGIPLARLCEPNEKGDALFFASAGLYDRSSIERAVQKVGVARMFEHMLYDSNGPKVRRGTVVVDFTGFGTKNVDVNGLRVGMATYMNHYPEIFDKIFLANYPRLLYGVWRTIVPLLDKRTARRVVFVETKEHLKGALVQRFSEKQIPGWLGGKAEVSTVRLLNGIEIGRS 286
            MT+YF+ KWSS++ R+   ++ + +  +   +  L+  +       E A   L  +DPFRCLL ++   LRDDILLR LRFN+ ++ K   QL++TL WRA + I S  L ++RGS+SGIPLAR+    E GD LFFA+A  YDRS I+RAVQKVGVARMFEHMLYDS GP+ +RGTVVVDF+GFGT++VD++GLR G+ATYMN+YPE+F+K+ L NYP+LLYGVW+ I PLLD +TARR+++    E L+ +L++ FS K IP WLGG++EVS++ LLNGIE+  S
Sbjct:    1 MTNYFTSKWSSLVSRAITQEQPTQTHRTDKHNSVLEQLRARGSSAFEHAASELPTDDPFRCLLTQKHRDLRDDILLRFLRFNDFDLDKTIRQLQSTLTWRAQTSISSTDLSVIRGSASGIPLARIGNTTENGDTLFFAAAECYDRSRIDRAVQKVGVARMFEHMLYDSGGPRAKRGTVVVDFSGFGTRHVDISGLRTGVATYMNYYPEVFEKVLLTNYPKLLYGVWKAIAPLLDAQTARRIIWAGNAEQLRDSLLETFSVKHIPTWLGGRSEVSSITLLNGIEVQAS 287          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A8J5XUZ1 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XUZ1_DIALT)

HSP 1 Score: 112 bits (280), Expect = 2.000e-24
Identity = 66/173 (38.15%), Postives = 99/173 (57.23%), Query Frame = 0
Query:  294 RVASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLLALDRQANVAYY-LDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQRNSYDCGAYACKFAE 465
            R   +GD SL  +D+A LVPP W+NDQLI+   E LR      D RV  + P+ ++ ++   D   L  + +   L+  +L+++ V+D  + D  G    GTHWSLLA  RQ   A++  DSL HL N++ ++ L  R+A +LG S +  V + TP+Q+N YDCG Y    A+
Sbjct:    5 RNVQIGDVSLCREDIAFLVPPRWINDQLIAAAFELLRARHAPPDERVLCVGPSEAYMIAQLADPTQLPSLFAPLKLETRQLVLMPVSDHDEPDDAG----GTHWSLLAFYRQPPDAFFAFDSLSHL-NLRAAEHLARRVAPLLGASHSRVVAVPTPQQQNGYDCGMYTIAIAD 172          
BLAST of Ggra1429.t1 vs. uniprot
Match: V3ZIT0 (ULP_PROTEASE domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZIT0_LOTGI)

HSP 1 Score: 99.0 bits (245), Expect = 5.130e-20
Identity = 66/220 (30.00%), Postives = 113/220 (51.36%), Query Frame = 0
Query:  295 VASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDS-RVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKA--SFVELDTPRQRNSYDCGAYACKFAEDVVQCFLSKKQISSVYEKGTELHQDQIDQKRQEIGKLACRLLPDEA 511
            V +  D+ L   DL LL  P W+ND+LI F  E+       + + +++++ P+++ F+ L    + L+ +    NL   + + L VND+ D+D  G    GTHWSLL   R     ++ DS  HL N  +++ L +RL   +   +    F+E+D+P+Q+N+YDCG Y    AE + + F       ++    TE     + QKR +I +L  ++  + A
Sbjct:   10 VLNFNDSLLRASDLKLLEGPHWLNDRLIGFCFEYFEREQFNHSADKLSLISPSVTQFIKLAPVED-LAVLLEPLNLPLKQFVFLAVNDNDDTDNSG----GTHWSLLVYIRSKQEFHHFDSYNHL-NEHIAKKLAYRLQPFVHAPRGRMKFIEIDSPQQKNAYDCGVYVISIAEHLCREFCECINNVTLSHVVTETS---VSQKRNQIKELIHKVAEEHA 220          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A7S0BCP5 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BCP5_9RHOD)

HSP 1 Score: 97.1 bits (240), Expect = 1.850e-19
Identity = 54/176 (30.68%), Postives = 97/176 (55.11%), Query Frame = 0
Query:  299 GDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDG--NVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQRNSYDCGAYACKFAEDVVQCFL 472
            GDA+++ +D+ LL    W+ND LI F+ E+LR+ V +ND R+  + PN++F ++ +   E+  ++  + NL + +LI++ VND+    +    + A G HWSLL +  +    + ++S+   +    ++++   L      S      L +P+QRN  DCG Y C   E ++Q FL
Sbjct:    3 GDATVTHEDVKLLNIGGWLNDALIWFFEEYLRVDVAKNDPRLCFISPNVAFLVAQSGSKEIAEELLMSLNLSEKKLILIPVNDAGAGPIQRICDKAVGNHWSLLVIHERTG-PFEMNSIDAHSASSAARLIADLLPVRKTLSNVKL--LRSPKQRNHSDCGVYVCAMMETILQLFL 175          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A7S2ZFL9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFL9_9RHOD)

HSP 1 Score: 93.6 bits (231), Expect = 1.560e-18
Identity = 53/165 (32.12%), Postives = 94/165 (56.97%), Query Frame = 0
Query:  299 GDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSR--DSDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQRNSYDCGAYAC 461
            GDA+++ +D+ LL    W+ND L+ F+ E+LR+ V  ND RV  + PN++F ++ +   E+  ++ +  NL + ELI++ VND+    S ++ N A G HWSLL +  +    + L+S+   +    ++++   L   +G + +    L +P+Q N  DCG Y C
Sbjct:    5 GDATVTQEDVKLLNAGGWLNDALVWFFEEYLRVEVANNDPRVCFVSPNVAFLVAQSGLKEIAEELLTTLNLPEKELILIPVNDAGAGPSQLNYNKAVGNHWSLLVI-HEGTGPFELNSVEARSVSSAAKLITALLP--VGKTLSDVKLLRSPKQSNHSDCGVYVC 166          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A565CSG0 (ULP_PROTEASE domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CSG0_9BRAS)

HSP 1 Score: 91.3 bits (225), Expect = 2.690e-17
Identity = 55/181 (30.39%), Postives = 92/181 (50.83%), Query Frame = 0
Query:  294 RVASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVE-LDTPRQRNSYDCGAYACKFAEDVVQCFLS 473
            ++    D  L   DL +L  P ++ND++I F+   L    +     ++++PP+++F++S   D E L        L D +L+I  VND+ D ++      G HWSLL   R+AN  ++ DSL  + +    Q L   ++  +    A++ E +DTP Q+N YDCG +    A  + Q F S
Sbjct:    9 KILRFDDVVLRRSDLDILNGPNFLNDRVIEFYLSFLS--TVHTSPTISLIPPSIAFWISNCPDTESLKDFMKPLGLHDKDLLIFPVNDNLDVEL---AEGGLHWSLLVYYREANSFFHHDSLMGMNSRNAKQ-LFKAVSPFVSNGDAAYRECIDTPLQKNGYDCGVFVLAIARVICQWFSS 183          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A200R624 (Peptidase C48 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R624_9MAGN)

HSP 1 Score: 90.1 bits (222), Expect = 6.790e-17
Identity = 56/179 (31.28%), Postives = 95/179 (53.07%), Query Frame = 0
Query:  294 RVASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRD-SDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVEL------DTPRQRNSYDCGAYACKFAE 465
            ++ S  D  L   DL +L  P ++ND++I F+  +L       D  + ++PP++SF+++   D E L        L + +++I  VND+ D +  +G    GTHWSLLA +R A V  + DS+   +N + ++ L + + R  G S ++  E+      +TP+Q N YDCG Y    A+
Sbjct:    5 KILSYNDVVLRRSDLGILSGPHFLNDRIIEFYFSYLASCCPSED--ILLVPPSISFWITNCPDRESLKDFVEPLKLAEKKVVIFAVNDNEDVTQAEG----GTHWSLLAYERNAKVFVHHDSMGG-SNWRYAKRLYNAVVRFKGVSDSAPSEISLAEYPNTPQQMNGYDCGLYVTAIAK 176          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A397XKD6 (ULP_PROTEASE domain-containing protein n=2 Tax=Brassiceae TaxID=981071 RepID=A0A397XKD6_BRACM)

HSP 1 Score: 89.7 bits (221), Expect = 9.630e-17
Identity = 55/181 (30.39%), Postives = 94/181 (51.93%), Query Frame = 0
Query:  294 RVASLGDASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFFMSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVEL-DTPRQRNSYDCGAYACKFAEDVVQCFLS 473
            ++ S  D  L   DL +L  P ++ND+ I F+  +L    L     ++++PP+++F++S   D E L        L+DS+L+IL VND+ + ++      G HWSLL   ++AN  ++ DS          Q L   ++  +    A++ E  DTP+Q+N YDCG +    A+ + + F S
Sbjct:    8 KILSFNDVVLRRSDLDILKGPNYLNDRDIEFYLSYLS--TLHTSPTISLIPPSIAFWISNCPDAESLKDFMKPLRLRDSDLVILPVNDNLNVEL---AEGGLHWSLLVYYKEANSFFHHDSFLGANQWNARQ-LYEAVSPFVSDGDAAYRECSDTPQQKNGYDCGVHILATAQVICKWFSS 182          
BLAST of Ggra1429.t1 vs. uniprot
Match: A0A7S4A0J1 (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A0J1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.160e-16
Identity = 60/167 (35.93%), Postives = 87/167 (52.10%), Query Frame = 0
Query:  300 DASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVA--ILPPNLSFFMSLT---DDHEVLSQIASANNLKDSELIILTVNDSRDSDVDG-NVASGTHWSLLALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQRNSYDCGAYA 460
            DA L   DLAL  PP W+ND+ I     H  + +LE+DS V   +L P +  F+ L    +D + +S +         E +++TV     SD  G +V  G+HWSLL  D  A++A + DS+    N + ++    RL         +F  +DTPRQ N+YDCGAYA
Sbjct:    9 DAVLERADLALFAPPHWLNDRAI-----HFAMKLLEDDSAVKWLLLDPAVYAFLMLQCEFEDEDEVSDLRRGLVFPGDERVLVTVV----SDAAGLHVGGGSHWSLLVYDVDADLARHYDSMGRSANEQRARQCAERLRVXXXRETVTFEAIDTPRQTNAYDCGAYA 166          
The following BLAST results are available for this feature:
BLAST of Ggra1429.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJK21.130e-11379.17Sentrin-specific protease 8 n=1 Tax=Gracilariopsis... [more]
A0A2V3IJK53.510e-10554.36SEC14-like protein 1 n=1 Tax=Gracilariopsis chorda... [more]
A0A8J5XUZ12.000e-2438.15Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
V3ZIT05.130e-2030.00ULP_PROTEASE domain-containing protein (Fragment) ... [more]
A0A7S0BCP51.850e-1930.68Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZFL91.560e-1832.12Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A565CSG02.690e-1730.39ULP_PROTEASE domain-containing protein n=1 Tax=Ara... [more]
A0A200R6246.790e-1731.28Peptidase C48 n=1 Tax=Macleaya cordata TaxID=56857... [more]
A0A397XKD69.630e-1730.39ULP_PROTEASE domain-containing protein n=2 Tax=Bra... [more]
A0A7S4A0J11.160e-1635.93Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 117..271
e-value: 1.4E-4
score: 31.3
IPR001251CRAL-TRIO lipid binding domainPFAMPF00650CRAL_TRIOcoord: 128..268
e-value: 8.3E-18
score: 64.7
IPR001251CRAL-TRIO lipid binding domainPROSITEPS50191CRAL_TRIOcoord: 108..274
score: 15.889263
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 130..269
e-value: 2.42741E-12
score: 62.7878
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 24..288
e-value: 9.5E-30
score: 105.7
IPR036865CRAL-TRIO lipid binding domain superfamilySUPERFAMILY52087CRAL/TRIO domaincoord: 131..271
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 316..474
e-value: 1.4E-11
score: 44.7
IPR003653Ulp1 protease family, C-terminal catalytic domainPROSITEPS50600ULP_PROTEASEcoord: 301..467
score: 15.358242
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 292..507
e-value: 1.2E-45
score: 157.9
IPR044613NEDD8-specific protease 1/2-likePANTHERPTHR46468SENTRIN-SPECIFIC PROTEASE 8coord: 290..501
IPR036273CRAL/TRIO, N-terminal domain superfamilySUPERFAMILY46938CRAL/TRIO N-terminal domaincoord: 67..100
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 293..501

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:64811..67369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1429.t1Ggra1429.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 64811..67369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1429.t1 ID=Ggra1429.t1|Name=Ggra1429.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=523bp
MTSYFSMKWSSILPRSTFVQEASGSSLSGSDDIALDTFKQSSKPMLEDAV
PRLSDEDPFRCLLVEQSTLRDDILLRVLRFNEMNVSKATHQLETTLNWRA
HSRICSVGLDMVRGSSSGIPLARLCEPNEKGDALFFASAGLYDRSSIERA
VQKVGVARMFEHMLYDSNGPKVRRGTVVVDFTGFGTKNVDVNGLRVGMAT
YMNHYPEIFDKIFLANYPRLLYGVWRTIVPLLDKRTARRVVFVETKEHLK
GALVQRFSEKQIPGWLGGKAEVSTVRLLNGIEIGRSRPMTPTPRVASLGD
ASLSVDDLALLVPPCWMNDQLISFWCEHLRIHVLENDSRVAILPPNLSFF
MSLTDDHEVLSQIASANNLKDSELIILTVNDSRDSDVDGNVASGTHWSLL
ALDRQANVAYYLDSLPHLTNVKVSQVLLHRLARMLGTSKASFVELDTPRQ
RNSYDCGAYACKFAEDVVQCFLSKKQISSVYEKGTELHQDQIDQKRQEIG
KLACRLLPDEAVEVGPQQSSPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001251CRAL-TRIO_dom
IPR036865CRAL-TRIO_dom_sf
IPR003653Peptidase_C48_C
IPR044613Nep1/2-like
IPR036273CRAL/TRIO_N_dom_sf
IPR038765Papain-like_cys_pep_sf