Ggra1423.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra1423.t1 vs. uniprot
Match: A0A2V3IJN1 (Exosome complex component RRP43 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN1_9FLOR) HSP 1 Score: 394 bits (1012), Expect = 1.350e-135 Identity = 203/295 (68.81%), Postives = 245/295 (83.05%), Query Frame = 0
Query: 1 MVNEEAYRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRIVRADDALVLTEFLRTLISPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNG-VENETENDLMNTEESEFDESG-SVIAVASARRTEFLELDSFPLTVSFQLFCEKALVDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVLKADG 293
M++E+ YRK+HP+EYLKRFIDKDVRPDGRA+STAR +LT SI+TAVGSALVRLG+TTVLAGV ATL+RP++ P+KGI VSVELL T+ GESR VR ++A+VL EFLRTLI PHID+S LC+E KLVW L+LTVYC+DHDGNLEDSVVLAAVAALRNVRLPTVRM D G +EN EN M ++E +E S++AV S++RTE LELD+FPLTVSFQLFCEKAL+DPS+EEE VC SRVT++M+P+GD+RG+LK GGH LS +LY SCL +SK+RV EYMK L+A
Sbjct: 1 MISEDVYRKVHPKEYLKRFIDKDVRPDGRAVSTARYLRLTIGSINTAVGSALVRLGNTTVLAGVNATLIRPNNANPDKGIVEVSVELLPTASGESRNVRGEEAVVLAEFLRTLIIPHIDVSTLCVEADKLVWCLSLTVYCIDHDGNLEDSVVLAAVAALRNVRLPTVRMVDGDEGGDIENGIENTRMIDADNEAEEGNESIMAVVSSKRTESLELDNFPLTVSFQLFCEKALIDPSAEEEVVCVSRVTFIMKPTGDMRGILKEGGHILSPKLYNSCLAQSKERVKEYMKKLQAGS 295
BLAST of Ggra1423.t1 vs. uniprot
Match: R7QL29 (Ribosomal RNA-processing protein 43 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL29_CHOCR) HSP 1 Score: 298 bits (763), Expect = 7.960e-98 Identity = 157/297 (52.86%), Postives = 219/297 (73.74%), Query Frame = 0
Query: 2 VNEEAYRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRIVRA-DDALVLTEFLRTLISPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQ------SNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALVDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVLKA 291
+++E ++K+HPREYL RF++KDVRPDGR+L+ AR +T SSI+TAVGSA++++G TT +AGV ATLV+P G P++GI V+VELL + + R+ ++A+ LTE+LR+LISPHI++SKLC+E G LVW L LTVYCVD+DGNLED+++LA VAA+RNV LP+VR+ E+ + VE +TEN E + S+IAVA+ RT LE+D++PL +SF LF K L+DPS EE VC SR+T++ RP+G+LRGVLKPGG N+ E LY+SCL +K+R+ + L+A
Sbjct: 1 MDQEVFQKVHPREYLARFLNKDVRPDGRSLTKARRVNITVSSIATAVGSAMLKMGKTTAVAGVHATLVQPAPGAPDQGILDVAVELLPMASPNYKSGRSSEEAICLTEYLRSLISPHINMSKLCVEAGLLVWQLRLTVYCVDNDGNLEDAILLAGVAAMRNVLLPSVRIIGEEVDEGRDAQMVEVKTEN------EEGXXXAESIIAVATVERTNSLEIDTYPLPISFILFDGKVLIDPSVAEESVCDSRITFLFRPTGELRGVLKPGGKNVPENLYQSCLTMAKERIPKLQAKLEA 291
BLAST of Ggra1423.t1 vs. uniprot
Match: A0A0L0HN85 (Ribosomal RNA-processing protein 43 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN85_SPIPD) HSP 1 Score: 159 bits (403), Expect = 1.640e-43 Identity = 101/292 (34.59%), Postives = 160/292 (54.79%), Query Frame = 0
Query: 2 VNEEAYRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRIVRADD-ALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEK-ALVDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVL 289
++ E ++KIHP EY +RF+ + VRPDGR LS R K+T +I+TA GSA+ RLG TTV+ G+ A + P G P G + +L + + + + ++E++ ++ S ++LS LCIE G+ VW L + C++++GN D+ +LA VAAL++VRLPT F E+ + + V +RT L+L P++V+F +F + L DP EEE SS++T ++ +G L G+LKPGG L +E SCL ++ R + +L
Sbjct: 30 LDSETFKKIHPTEYHRRFLSQGVRPDGRTLSRFRKAKITVGAITTAHGSAMARLGETTVVCGIKAEITEPKTGAPRDGFIVPNFDLPPLCSPQFKPGPPSELSQSISEYINRVLESSKLLNLSDLCIEEGRAVWVLYADIVCLNYEGNAMDAAMLALVAALKHVRLPTAT------------------------FYEADNAVRVKE-QRTIPLKLSRTPISVTFGVFDGQFILADPDIEEEPHLSSQLTVIIEQNGGLCGMLKPGGSALGQETLTSCLEAARTRATHILGIL 296
BLAST of Ggra1423.t1 vs. uniprot
Match: A9RPF4 (Ribosomal RNA-processing protein 43 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RPF4_PHYPA) HSP 1 Score: 159 bits (403), Expect = 2.460e-43 Identity = 107/284 (37.68%), Postives = 160/284 (56.34%), Query Frame = 0
Query: 5 EAYRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRIVR-ADDALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALVDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGH-NLSEELYKSCLRRSKKRVAE 284
EAY++++P ++ +R +D DVRPDGR L+ AR + SI+TA GSALV++G+TT+LAGV ++ P +P +G +V ++ S R R A+ A V++E L + S ++L +LCI PGK W + VYC+D DG+L D+ +LAAVAAL +++LP V++T E V + N E + V S +R LE S P+ ++ + L DPS+EEE + +T +M SG L KPGG + K C+ +KKRVAE
Sbjct: 20 EAYKRLYPLQFYERHLDSDVRPDGRPLTRARPTSVNLGSIATADGSALVKIGNTTMLAGVKLEVITPSTASPNQGQVAVDFQMPSICSPLVRPGRPAEAAWVVSEQLSNALVSSNFVNLQQLCIVPGKAAWIAYVDVYCLDADGSLLDAALLAAVAALTHLQLPAVKVT-ETGRVVPLKNHNGDAGQEVDSIAKKNEDQIVKSRQR---LERSSMPIALTCVSHRKHLLADPSAEEESILQMSLTVIMDTSGRLISFYKPGGAVAATSATVKDCIELTKKRVAE 299
BLAST of Ggra1423.t1 vs. uniprot
Match: exosome complex component RRP43-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE543AB (exosome complex component RRP43-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE543AB) HSP 1 Score: 159 bits (402), Expect = 4.880e-43 Identity = 102/287 (35.54%), Postives = 161/287 (56.10%), Query Frame = 0
Query: 7 YRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLISPH--IDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKAL-VDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVL 289
++ HPREY +RF++KDVRPDGR L R L ++TA GS+LVRLG+TTV+ G+ A L P P++G +VEL + R + A VL++ + ++S I+L LC+ P KLVW L+ + C+++DGN+ D+ VLA +AA RN +LP V +++E TEE E D R T+ L+L S P++ +F F + L VDP+++EE + + +T V + ++ + KPGG L+E + C+ R+K R + +K++
Sbjct: 64 FKTAHPREYYRRFLEKDVRPDGRELGEFRSTVLNIGCVTTAEGSSLVRLGNTTVMCGIKAELATPKTDAPKQGYIVPNVELSPLCSPQFRPGPPGEQAQVLSQLMAEVVSSSNCIELEDLCVVPHKLVWVLHCDMVCLNYDGNITDACVLALLAAFRNTQLPGVHVSEE---------------TEEVETD----------LRSTDPLQLRSLPVSTTFNCFDDHILFVDPTADEESLATGMITIVTA-ADNMCMLHKPGGSPLTESQIQQCINRAKTRSQQVLKLI 324
BLAST of Ggra1423.t1 vs. uniprot
Match: A0A7M5X903 (Ribosomal RNA-processing protein 43 n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X903_9CNID) HSP 1 Score: 154 bits (390), Expect = 7.120e-42 Identity = 100/287 (34.84%), Postives = 156/287 (54.36%), Query Frame = 0
Query: 7 YRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALV-DPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVL 289
++ P E+ K F+ ++VRPDGR L R L SI+TA GSALVRLG T V+ G++A L P TP+KG +V+L + + R +DDA +L++F+ + S + L LCI KL W + + C+ HDGNL+D+++ A AALRN +LPTV +E + D+ ++ F L + + P++ +F LF ++ L+ DP++EEE++ + +T V+ G L V KPGG + EE K C+R + KR AE + ++
Sbjct: 5 FKTAQPIEFYKHFLKENVRPDGRELLKFRDALLNIGSINTARGSALVRLGHTMVICGISAELAEPKATTPDKGFFVPNVDLPPSCSNKYRPGPPSDDAQILSQFVLDVATNSEVLKLENLCIATKKLAWVIYADIQCISHDGNLKDAIIAALYAALRNTKLPTVEYNEETA---------DVQVKQDQLFQ----------------LPIQTCPVSSTFALFQDEILLADPTNEEEEISNGTITIVVNSEGKLCMVSKPGGAEMKEEKLKVCIRTALKRHAEVLSLV 266
BLAST of Ggra1423.t1 vs. uniprot
Match: R7TKM0 (Ribosomal RNA-processing protein 43 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TKM0_CAPTE) HSP 1 Score: 154 bits (389), Expect = 1.000e-41 Identity = 101/283 (35.69%), Postives = 152/283 (53.71%), Query Frame = 0
Query: 12 PREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKAL-VDPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVLK 290
P EY RF+++DVRPDGR L R L SI TA GSALV+LG+T +L G+ A +V + TPE+GI SV LL S + R D A T F+ L+ S +DL LCIE GK WNL+ + C+D+DGN+ D+ LA +AAL+N LP V + +E SG+V A+ L +++ P++ + +F +K L VDP+ EEE + + +T V + + KPGG ++ + C++RS+ R E +++++
Sbjct: 10 PFEYYSRFLEQDVRPDGRDLGGIRPTTLNVGSIDTADGSALVKLGNTCILCGIKAEMVASNPETPEQGIVDSSVSLLPMSTPQFRDRPPVDLAPSCTHFIEQLLTCSGCLDLKDLCIEKGKHAWNLHCDLMCLDYDGNVLDACCLALIAALKNTVLPKVTIDEE-----------------------SGTV--KLDAKEKHPLSVNAVPVSTTLAIFADKVLFVDPTQEEESLATGFITVVTKDDDHICMTYKPGGSSVQPSQMQDCIKRSQHRRPEVLQLIR 267
BLAST of Ggra1423.t1 vs. uniprot
Match: A7SQ48 (Ribosomal RNA-processing protein 43 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SQ48_NEMVE) HSP 1 Score: 153 bits (386), Expect = 2.720e-41 Identity = 106/289 (36.68%), Postives = 156/289 (53.98%), Query Frame = 0
Query: 7 YRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALV-DPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVLKA 291
++ P EY K+F+ +++RPDGR L R L SISTA GSALV+LG+TTV+ GVTA P P KG +V+L R ++ A VL+ F+ LI S IDL LCI GKLVW L + + C+D+DGN+ D+ V+A +AAL+N RL TV + +E TE E E+ + L+L S P+ V+F +F + + DP+ EEE++ S +V+ VM + + V KPGG L+++ + C + RV E +++ A
Sbjct: 5 FKTAEPVEYYKQFLKENIRPDGRGLFDFRETILNVGSISTANGSALVKLGNTTVVCGVTAEFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLITNSQLIDLEDLCIVDGKLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEE---------------TETPEPSENKDI----------HLKLKSMPVAVTFGIFDDDHIYCDPTDEEERLASGKVSVVMTTNNKVVAVHKPGGPPLTQDKLQECFDVTTGRVLEVQQLIDA 268
BLAST of Ggra1423.t1 vs. uniprot
Match: A0A8B7XGS1 (Ribosomal RNA-processing protein 43 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XGS1_ACAPL) HSP 1 Score: 153 bits (386), Expect = 2.800e-41 Identity = 98/287 (34.15%), Postives = 151/287 (52.61%), Query Frame = 0
Query: 7 YRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLIS--PHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALV-DPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVL 289
++ P EY ++F+ +D+RPDGR L R L SI+TA GSALV+LG+TT + G+ A P P+ GI +V+L + ++ A V+T+ L +I+ IDL LCI KL W L + C+D+DGN+ D+ ++A VAALRNV LP V + E S + V S+ +T L + + P+ +F +F E L+ DP++EEE + + VT VM G L+ V KPGG LS + + C+ R++ R + +++
Sbjct: 7 FKTAQPVEYYRKFLKEDIRPDGRELGEIRPTILNVGSITTADGSALVKLGNTTCICGIKAEFCTPKEDLPKCGIVVPNVDLPPLCSSRFKPGPPSEQAQVVTQLLADVINNAKSIDLESLCIVEAKLCWVLFCDIVCLDYDGNIVDACLVALVAALRNVLLPEVTI-------------------------EEDSQLPVTSSDKTVSLSIHNTPVATTFAIFDESVLLADPTNEEESIATGEVTIVMTEDGRLQAVHKPGGSPLSPDQLQDCITRTQTRSEDVRRLI 268
BLAST of Ggra1423.t1 vs. uniprot
Match: exosome complex component RRP43-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA186 (exosome complex component RRP43-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA186) HSP 1 Score: 152 bits (384), Expect = 5.250e-41 Identity = 96/287 (33.45%), Postives = 155/287 (54.01%), Query Frame = 0
Query: 7 YRKIHPREYLKRFIDKDVRPDGRALSTARVFKLTTSSISTAVGSALVRLGSTTVLAGVTATLVRPDHGTPEKGIASVSVELLSTSCGESRI-VRADDALVLTEFLRTLI--SPHIDLSKLCIEPGKLVWNLNLTVYCVDHDGNLEDSVVLAAVAALRNVRLPTVRMTDEQSNGVENETENDLMNTEESEFDESGSVIAVASARRTEFLELDSFPLTVSFQLFCEKALV-DPSSEEEKVCSSRVTYVMRPSGDLRGVLKPGGHNLSEELYKSCLRRSKKRVAEYMKVL 289
++ P EY ++F+ KDVRPDGR L R + SISTA GSALV+LG+TTV+ G+ A L P + P+KG +V+L R ++ A V+++F+ ++ S ++ LCI GK+VW L + C+D+DGN+ D+ +++ +AALRNV LP++ + +E + ++ + + + S P++ SF +F L+ DP++EEE + + VT V G+L + KPGG +LSE + C++RS R E K+L
Sbjct: 5 FKTAQPVEYYRQFLKKDVRPDGRELGEIRSTIVNIGSISTAEGSALVKLGNTTVICGIKAELCTPTNDEPKKGFVVPNVDLPPLCSPRFRPGPPSEQAQVVSQFIADVLKDSKMVNHEDLCIAEGKIVWVLYCDMMCLDYDGNVIDACIISLLAALRNVALPSIEVDEETAK-------------------------PKLTSSTSSTMTVQSLPVSTSFAIFDNSILIADPTNEEENLATGVVTVVTNECGELCALHKPGGSSLSESQIQECVKRSFSRGDEIRKLL 266 The following BLAST results are available for this feature:
BLAST of Ggra1423.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra1423.t1 ID=Ggra1423.t1|Name=Ggra1423.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bpback to top |