Ggra1420.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1420.t1
Unique NameGgra1420.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length448
Homology
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A2V3IJN4 (Pre-mRNA-processing factor 17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN4_9FLOR)

HSP 1 Score: 551 bits (1420), Expect = 9.830e-193
Identity = 283/450 (62.89%), Postives = 319/450 (70.89%), Query Frame = 0
Query:    1 MDMLTAYSHNSSDAESSSNTPPASPEPSKRVVPTGTIETIVFDERQFSSLERSFELPDTKGAPKKRPRSPLRNPDDQLKAT---DKATIVKKPRASTSQPPRPSTSSVLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVWLSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQFLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            MDMLTAY+ +SSD ++  N+   SP PSKR + TGT+ETI FDE+ FSSLERSF+ P     P+KR                    +   K+PR ST Q    + S VLVP S FHLSS  DYQNR W+ PPS+ RTFA LEQYTPYIPKR  + ++AHPRGASVV FSP +GHLVLSAGND SAKVW S S KLAR+YVGHSKAIRDAVF+ + S FLTA                                                 QIDVRDAS V+QTYDEHMG VNS+SFID GRRFV+SADDKVLRVWEYG+PVVIKYI+ P+AHSMPVT++HPNQKWL CQSMDNTIRLFS   RFKRNEKR+FRGHLVAGYACGM+TSPDGR+LVSGDSLGRLFYWDWKTARLFR  +AHK+  CSSVDWHPTQ SFVVSCGWDGN+MFWD
Sbjct:    1 MDMLTAYADHSSDEDAHQNSHSQSPVPSKRSIVTGTVETIAFDEKAFSSLERSFQPP---AKPQKRXXXXXXXXXXXXXXXXXPQSSATQKRPRTSTEQHTNKAPS-VLVPSSTFHLSSQTDYQNRAWHLPPSSCRTFAHLEQYTPYIPKRATSCKSAHPRGASVVRFSPEYGHLVLSAGNDASAKVWYSQSAKLARTYVGHSKAIRDAVFDQTASQFLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDVRDASKVVQTYDEHMGSVNSLSFIDEGRRFVSSADDKVLRVWEYGIPVVIKYITDPSAHSMPVTIIHPNQKWLCCQSMDNTIRLFSIGHRFKRNEKRVFRGHLVAGYACGMTTSPDGRFLVSGDSLGRLFYWDWKTARLFRTAEAHKRAPCSSVDWHPTQPSFVVSCGWDGNVMFWD 446          
BLAST of Ggra1420.t1 vs. uniprot
Match: R7QJ34 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ34_CHOCR)

HSP 1 Score: 435 bits (1119), Expect = 5.260e-146
Identity = 229/449 (51.00%), Postives = 293/449 (65.26%), Query Frame = 0
Query:   18 SNTPPASPEPSKRVVPTGTIETIVFDERQFSSLERSFEL------PDTKGAPKKRPRSPLRNPDD-----QLKATDKATIVKKPRASTSQPPRPSTSSV-----LVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVAS-ENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVWLSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            S TPP  P   K++V TG IE +  D  +F++ ER F          T+ A ++RP      PDD       +++ K    K+ R+S+   P+PS   +     L+P S FH + A DYQ R+W  P   +RTFADLE+YTPYIPKR     + AH  G SVV F P +GHL+LSAG DG A+VW ++S KL R Y GHSK IRD  F++ G  FL                 V+ SF T  AP CV+F P    Q  FL GC ++K+LQIDVR+A+ V+Q YD+HMG VNSISF++   RFV+SADDKVLRVW+YG+PVVIKY+S P  HSMPVT++HPN+KWLACQSMDN I ++S   RFK N K+ + GHLVAGYACG++ S DGR++ SGDSLGRLF+WDWK++RLFR +  HK  C   ++WHPT+ S VVSCGWDG+I FWD
Sbjct:   83 SKTPP--PATKKKIV-TGIIEAVEIDAAEFNANERRFAARAVAVDTATRNAAQQRPGH---RPDDCKNDKPAESSRKQAPRKRERSSS---PKPSAKKLRDQGPLIPTSTFHANEAKDYQGRSWVMPSGGARTFADLEEYTPYIPKRCARELKGAHVGGVSVVRFFPEYGHLLLSAGMDGKARVWRTSSGKLVRDYCGHSKTIRDVCFSNDGRRFLXXXXXXXXXXXXXXXXXVVGSFTTGAAPSCVKFNPEPEKQNEFLAGCANRKILQIDVRNANEVVQEYDQHMGAVNSISFVEDNTRFVSSADDKVLRVWDYGIPVVIKYVSDPLMHSMPVTVLHPNRKWLACQSMDNKIAIYSARDRFKHNTKKRYGGHLVAGYACGLTFSGDGRFIGSGDSLGRLFFWDWKSSRLFRTLQGHKGVCIG-LEWHPTKPSLVVSCGWDGDIKFWD 521          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A7S3A0D3 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0D3_9RHOD)

HSP 1 Score: 370 bits (951), Expect = 1.540e-120
Identity = 169/346 (48.84%), Postives = 238/346 (68.79%), Query Frame = 0
Query:  106 LVPKSEFHLSSANDYQNRT-WNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            + P S +H  +A D   R+ +  PP  ++T  ++E YT YIPK+ +     H +G S + F P +GHL+LSAG D   K+W + +  K  R+Y GH K++RD  F+  G HFL+A++D++V LWD E+G+ +S+F     P C+++ P +  Q  F+ GC DKK++Q D R +  ++Q Y++H+G VN+I+FID  RRFV+S+DDK LRVWE+G+PVVIKYIS PT HSMP    HPN KW+ CQS+DN +  ++T  RFK N K+ F+GHLVAGYAC ++ +PDGR+L SGDS GRLF+WDWKT R+FR++ AH       ++WHPT+ S V SCGWDG I +WD
Sbjct:  189 VKPTSTYH-GNAKDLGGRSSYINPPKHAKTIDEMEVYTSYIPKKCIHVWVGHKKGVSAIRFFPKYGHLLLSAGMDSQVKIWDVGSHGKCYRTYSGHGKSVRDVAFSGDGKHFLSASYDRTVKLWDTETGQYISTFSNRAIPYCIKYNPDEDKQNEFVAGCSDKKIVQYDTR-SGEIVQEYNQHLGAVNTITFIDQNRRFVSSSDDKTLRVWEWGIPVVIKYISDPTMHSMPAVAPHPNGKWVCCQSLDNQVITYATQNRFKLNSKKNFKGHLVAGYACQLAFAPDGRFLGSGDSTGRLFFWDWKTTRIFRSLKAHDGVAIG-IEWHPTEPSKVASCGWDGLIKYWD 531          
BLAST of Ggra1420.t1 vs. uniprot
Match: M5Y4Q2 (Uncharacterized protein n=20 Tax=Amygdaloideae TaxID=171637 RepID=M5Y4Q2_PRUPE)

HSP 1 Score: 366 bits (940), Expect = 4.000e-118
Identity = 171/346 (49.42%), Postives = 237/346 (68.50%), Query Frame = 0
Query:  105 VLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            V+V K+ FH     DYQ R+W APP  ++   D      YIPKR+V + + H +G S + F P +GHL+LSAG D   K+W + N+ K  R+Y+GHSKA+RD  FN+ GS FLTA++DK++  WD E+G+V+S+F T   P  V+  P +  Q   L G  DKK++Q D+ +   + Q YD+H+G VN+I+F+D+ RRFVTS+DDK LRVWE+G+PVVIKYIS P  HSMP   +HPN  WLA QSMDN I ++ST  +F+ N+K+ F GH+VAGYAC ++ SPDGR+++SGD  GR ++WDWKT ++FR +  H+  C  +  WHP + S V +CGWDG I +WD
Sbjct:  251 VVVEKTTFHGKEERDYQGRSWIAPPRDAKASNDHC----YIPKRLVHTWSGHTKGVSAIRFFPNYGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFNNDGSKFLTASYDKNIKYWDTETGQVISTFSTGKVPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNEGK-INQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNSNWLAAQSMDNQILIYSTREKFQLNKKKRFAGHVVAGYACQVNFSPDGRFVMSGDGEGRCWFWDWKTCKVFRTLKCHEGVCIGAA-WHPLEQSKVATCGWDGLIKYWD 590          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A059D7L6 (Uncharacterized protein n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059D7L6_EUCGR)

HSP 1 Score: 364 bits (934), Expect = 2.750e-117
Identity = 172/346 (49.71%), Postives = 233/346 (67.34%), Query Frame = 0
Query:  105 VLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            V+  KS FH     DYQ R+W APP  ++   D      YIPKR+V + + H +G S + F P HGHL+LSAG D   K+W + NS K  R+Y+GHSKA+RD  F + G+ FLTA +DK++  WD E+GKV+S+F T   P  V+  P D  Q   L G  DKK++Q D+ +   + Q YD+H+G VN+I+F+D  RRFVTS+DDK LRVWE+G+PVVIKYIS P  HSMP   +HPN  WLA QS+DN I ++ST  RF+ N+K+ F GH+VAGYAC ++ SPDGR+++SGD  GR ++WDWK+ ++FR +  H+  C    +WHP + S V +CGWDG I +WD
Sbjct:  246 VVSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHC----YIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTETGKVISTFSTGKIPYVVKLHPDDEKQNILLAGMSDKKIVQWDM-NTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGRCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYWD 585          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A6P8CXN0 (pre-mRNA-processing factor 17 isoform X1 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8CXN0_PUNGR)

HSP 1 Score: 362 bits (930), Expect = 1.260e-116
Identity = 171/346 (49.42%), Postives = 231/346 (66.76%), Query Frame = 0
Query:  105 VLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            V+  KS FH     DYQ R+W APP   +   D      YIPKR+V + + H +G S + F P HGHL+LSAG D   K+W + NS K  R+Y+GHSKA+RD  F + G+ FLTA +DK++  WD E+GKV+S+F T   P  V+  P D  Q   L G  DKK++Q D+ +   + Q YD+H+G VN+I+F+D  RRFVTS+DDK LRVWE+G+PVVIKYIS P  HSMP   +HPN  WLA QS+DN I ++ST  RF+ N+K+ F GH+ AGYAC ++ SPDGR+++SGD  GR ++WDWK+ ++FR +  H+  C    +WHP + S V +CGWDG I +WD
Sbjct:  251 VVADKSTFHGKEERDYQGRSWIAPPKDVKASNDHC----YIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDKNIKYWDTETGKVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM-NTGQITQEYDQHLGAVNTITFVDDNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGRCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYWD 590          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A7J7D3Y7 (Pre-mRNA-processing factor 17-like isoform X1 n=4 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D3Y7_TRIWF)

HSP 1 Score: 362 bits (928), Expect = 2.310e-116
Identity = 169/346 (48.84%), Postives = 233/346 (67.34%), Query Frame = 0
Query:  105 VLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            V+  KS FH     DYQ R+W APP   +   D      YIPKR+V + + H +G S + F P +GHL+LSAG D   K+W + NS K  R+Y+GHSK +RD  F + G+ FLTA +DK++  WD E+G+V+S+F T   P  V+  P +  Q   L G  DKK++Q D+ ++  + Q YD+H+G VN+I+F+D+ RRFVTS+DDK LRVWEYG+PVVIKYIS P  HSMP   +HPN  WLA QS+DN I ++ST  RF+ N+K+ F GH+VAGYAC ++ SPDGR+++SGD  G+ ++WDWK+ ++FR V  H+  C    +WHP + S V +CGWDG I +WD
Sbjct:  248 VVADKSTFHGKELKDYQGRSWIAPPKDKKATNDHC----YIPKRLVHTWSGHTKGVSAIRFFPKYGHLILSAGLDTKVKIWDVYNSGKCMRTYMGHSKGVRDISFCNDGTKFLTAGYDKNIKYWDTETGQVISTFSTGKVPYVVKLNPDEDKQNILLAGMSDKKIVQWDI-NSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTVKCHEGVCIGC-EWHPLEQSRVATCGWDGLIKYWD 587          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A7S3UD02 (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UD02_9CHLO)

HSP 1 Score: 358 bits (918), Expect = 1.110e-115
Identity = 171/364 (46.98%), Postives = 233/364 (64.01%), Query Frame = 0
Query:   87 VKKPRASTSQPPRPSTSSVLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            V+KP   +  P   +  SV   K+ FH     DYQ R W+ PP   +      Q T Y+PKR V +   H +G + + F P HGHL+LSA  DG+ K+W +   K+  RSY+GH++A+RD  F++ G+ F + ++DK + LWD E+GKVL ++ T   PLCV+  P +  Q   L G  D KV++ D       IQ Y EHMG VN+I+FID  RRFVTS+DDK +RVWEYG+PV IKYI+ P  HSMP   VHPNQKW   QS+DNT+  +ST  RF+ N K+ F+GH  +GYAC ++ S DG+++VSGD+ GR F+WDWKT R+FR++ AH   C    +WHP ++S V +CGWDG I +WD
Sbjct:  166 VEKPTGPSEAPVTSTKPSVETDKTVFHGKQEKDYQGRGWSEPPRDRKPI----QETCYVPKRHVHTWKGHTKGVAAIRFFPIHGHLLLSASMDGTVKIWDVYGDKRCMRSYMGHAQAVRDICFSNDGTRFASCSWDKKMKLWDTETGKVLGTYSTGRVPLCVKIHPNENMQHVLLAGTSDNKVVEFDTNTGEQ-IQQYTEHMGAVNTITFIDDNRRFVTSSDDKTVRVWEYGIPVQIKYIAEPDMHSMPSVAVHPNQKWFVAQSLDNTVVTYSTKDRFRMNRKKTFKGHRNSGYACQVNFSHDGQFVVSGDAEGRCFFWDWKTTRVFRSIKAHDNVCVGC-EWHPYETSKVATCGWDGLIKYWD 523          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A0D2QSZ1 (Uncharacterized protein n=35 Tax=Malvaceae TaxID=3629 RepID=A0A0D2QSZ1_GOSRA)

HSP 1 Score: 360 bits (923), Expect = 7.840e-115
Identity = 168/345 (48.70%), Postives = 233/345 (67.54%), Query Frame = 0
Query:  106 LVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD 447
            LV K+ FH     DYQ R+W APP  ++   D      YIPKR++ + + H +G S + F P +GHL+LSAG D   K+W + NS K  R+Y+GHSKA+RD  F + GS FLTA +DK++  WD E+G+V+S+F T   P  V+  P +  Q   L G  DKK++Q D+ +     Q YD+H+G VN+I+F+D+ RRFVTS+DDK LRVWE+G+PVVIKYIS P  HSMP   +HPN  WLA QS+DN I ++ST  RF+ N+K+ F GH+VAGYAC ++ SPDGR+++SGD  G+ ++WDWK+ ++FR +  H+  C    +WHP + S V +CGWDG I +WD
Sbjct:  313 LVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHC----YIPKRLIHTWSGHTKGVSAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDI-NTGQTTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGC-EWHPLEQSKVATCGWDGLIKYWD 651          
BLAST of Ggra1420.t1 vs. uniprot
Match: A0A6P5GHT6 (pre-mRNA-processing factor 17 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GHT6_ANACO)

HSP 1 Score: 358 bits (919), Expect = 9.950e-115
Identity = 167/344 (48.55%), Postives = 232/344 (67.44%), Query Frame = 0
Query:  106 LVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVVASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVW-LSNSKKLARSYVGHSKAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFCPPDPSQ--FLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRFVTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDNTIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLFYWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFW 446
            LV KS FH     DYQ R+W APP  ++   D      YIPKR+V + + H +G S + F P HGHL+LSA  D   K+W + NS K  R+Y+GHSKA+RD  F++ GS FL+A +DK++  WD E+G+V+S+F T   P  V+  P +  Q   L G  DKK++Q D+ ++  + Q YD+H+G VN+I+F+D+ RRFVTS+DDK LRVWE+G+PVVIKYIS P  HSMP   +HPN  WLA QS+DN I ++ST  RF+ N+K+ F GH+ AGYAC ++ SPDGR+++SGD  G+ ++WDWK+ ++FR +  H   C    +WHP + S V +CGWDG I +W
Sbjct:  273 LVVKSTFHGKEERDYQGRSWIAPPKDAKATNDHC----YIPKRLVHTWSGHTKGVSAIRFFPKHGHLLLSASMDSKVKIWDVFNSGKCMRTYMGHSKAVRDISFSNDGSKFLSAGYDKNIQYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDM-NSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNSNWLAAQSLDNQILIYSTKERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVISGDGEGKCWFWDWKSCKVFRTLKCHDGVCIGC-EWHPLEQSKVATCGWDGMIKYW 610          
The following BLAST results are available for this feature:
BLAST of Ggra1420.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJN49.830e-19362.89Pre-mRNA-processing factor 17 n=1 Tax=Gracilariops... [more]
R7QJ345.260e-14651.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3A0D31.540e-12048.84Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M5Y4Q24.000e-11849.42Uncharacterized protein n=20 Tax=Amygdaloideae Tax... [more]
A0A059D7L62.750e-11749.71Uncharacterized protein n=6 Tax=Myrtoideae TaxID=1... [more]
A0A6P8CXN01.260e-11649.42pre-mRNA-processing factor 17 isoform X1 n=3 Tax=P... [more]
A0A7J7D3Y72.310e-11648.84Pre-mRNA-processing factor 17-like isoform X1 n=4 ... [more]
A0A7S3UD021.110e-11546.98Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A0D2QSZ17.840e-11548.70Uncharacterized protein n=35 Tax=Malvaceae TaxID=3... [more]
A0A6P5GHT69.950e-11548.55pre-mRNA-processing factor 17 n=3 Tax=Ananas comos... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 231..270
e-value: 0.18
score: 20.9
coord: 189..228
e-value: 6.4E-7
score: 39.0
coord: 406..447
e-value: 1.5E-5
score: 34.5
coord: 146..186
e-value: 0.062
score: 22.4
coord: 316..356
e-value: 14.0
score: 9.8
coord: 362..403
e-value: 0.39
score: 19.6
coord: 274..313
e-value: 5.9E-6
score: 35.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 365..397
e-value: 0.11
score: 13.4
coord: 277..312
e-value: 0.0012
score: 19.6
coord: 327..355
e-value: 0.087
score: 13.7
coord: 192..228
e-value: 0.0017
score: 19.2
coord: 411..447
e-value: 0.0013
score: 19.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 196..237
score: 14.084198
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 281..313
score: 12.313033
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 423..447
score: 9.505904
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 153..195
score: 9.840087
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 130..447
e-value: 5.8E-89
score: 300.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 196..233
score: 10.627413
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 281..313
score: 10.258324
NoneNo IPR availableCDDcd00200WD40coord: 156..447
e-value: 3.56517E-45
score: 157.112
IPR032847Pre-mRNA-processing factor 17PANTHERPTHR43979PRE-MRNA-PROCESSING FACTOR 17coord: 75..447
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 144..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000844_piloncontigtig00000844_pilon:34898..36241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1420.t1Ggra1420.t1Gracilaria gracilis GNS1m malemRNAtig00000844_pilon 34898..36241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1420.t1 ID=Ggra1420.t1|Name=Ggra1420.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=448bp
MDMLTAYSHNSSDAESSSNTPPASPEPSKRVVPTGTIETIVFDERQFSSL
ERSFELPDTKGAPKKRPRSPLRNPDDQLKATDKATIVKKPRASTSQPPRP
STSSVLVPKSEFHLSSANDYQNRTWNAPPSTSRTFADLEQYTPYIPKRVV
ASENAHPRGASVVHFSPGHGHLVLSAGNDGSAKVWLSNSKKLARSYVGHS
KAIRDAVFNHSGSHFLTAAFDKSVLLWDVESGKVLSSFKTSGAPLCVRFC
PPDPSQFLVGCEDKKVLQIDVRDASNVIQTYDEHMGRVNSISFIDSGRRF
VTSADDKVLRVWEYGVPVVIKYISGPTAHSMPVTLVHPNQKWLACQSMDN
TIRLFSTSRRFKRNEKRIFRGHLVAGYACGMSTSPDGRYLVSGDSLGRLF
YWDWKTARLFRAVDAHKKPCCSSVDWHPTQSSFVVSCGWDGNIMFWD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR032847PRPF17
IPR036322WD40_repeat_dom_sf