Ggra1418.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra1418.t1
Unique Name	Ggra1418.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	574

Homology

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BLAST of Ggra1418.t1 vs. uniprot
Match: A0A2V3IJQ9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJQ9_9FLOR)

HSP 1 Score: 561 bits (1446), Expect = 6.480e-195
Identity = 296/428 (69.16%), Postives = 338/428 (78.97%), Query Frame = 0

Query:  151 MRSLSLGHRASDDAQDLDN-----KPWSSGGPALFSRSPTEDSVSWSRIFASSFDLRDKTRWRKRNYSYSCSDFEIEEEHHIVEIGQRLPDRCHSGTEEDVFGRRRRDFSIASFSLPAVSASRLLACDTNHSP--LPPPPQPRADDVSTRPSSIKHSSKSSAERRVKEKQK-HLLDTPMTKPDRNSKSALIKEATNDDFDEQEAIRHITKAIDSSKGRLRKSANMSKAFTSVIKSGDGFLRKSELIQQTLNSEDSKDPSMIILLDPESCEPSPIRVEGASSASEESASVENMKSVHVVPPPNIGFSTSMTARQCAATLETILRDMACKVSRYAEEEHGKNSIVKLKASRFSGGARLLDRKVKVLVTVREEDHIRTSVSFRRVATMYGNKDAHFPMCCEIRERFQREWPAVVEALYIRVESNQVLSTRS 570
            MRSLSL HR S      DN     KPWSSGGPALFS SPT+D++SWSRIF SSFDLRDKTRW+KRN SYSCSDFEI EE H+VEIGQRLPDR HSGTEEDVFGRRR DFS  SFS+    +S +LACD   SP    PPPQP  +            +      R+ E    H +DTP+ KPDRN+K+ LIKEA N+ FDEQEAIRHITKAIDSSKGRLRKSANM+KAFTSVI+SGDGFLRKSE+IQQTLNSEDSKDPSMIILLDPE+ +P+ I VEG S+ASEES SVE MKSV VVP PN GFSTSMTARQCAATLETILRDM+C+VSRY+++ +GK + ++LKA+R + GARLLDRKVK++VTVREEDHIRTSVSFRR+ TMYG + AH P+C +IR+RFQREWPAVVEALYIRV +     T S
Sbjct:    1 MRSLSLNHRPSPSPVHSDNSFPNNKPWSSGGPALFSPSPTDDNLSWSRIFRSSFDLRDKTRWKKRNLSYSCSDFEIAEEPHVVEIGQRLPDRSHSGTEEDVFGRRRPDFSSRSFSMLTSPSSHVLACDVQPSPHHTEPPPQPLTEPXXXXXXXXXXXNPRKRSSRISETAATHFVDTPIAKPDRNAKAPLIKEANNEHFDEQEAIRHITKAIDSSKGRLRKSANMNKAFTSVIRSGDGFLRKSEIIQQTLNSEDSKDPSMIILLDPEANDPANIHVEGVSTASEESGSVETMKSVRVVPVPNFGFSTSMTARQCAATLETILRDMSCRVSRYSDDVNGKGNTLRLKATRVANGARLLDRKVKLMVTVREEDHIRTSVSFRRIPTMYGTRHAHVPLCNDIRDRFQREWPAVVEALYIRVPNPDGTKTNS 428

The following BLAST results are available for this feature:

BLAST of Ggra1418.t1 vs. uniprot

BLAST of Ggra1418.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IJQ9	6.480e-195	69.16	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..335

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000844_pilon	contig	tig00000844_pilon:25913..27634 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra1418.t1	Ggra1418.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000844_pilon 25913..27634 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra1418.t1 ID=Ggra1418.t1|Name=Ggra1418.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=574bp
MVPPPVNKFRTSIERAVRAFSFHRASTDSSPPQPSQQPSVAPSTPPYSPQ
PNVQPTRSFPNLSRIRHSSQYSQRPPRPHRPLKFVPRRNTHSSRSSLSLR
NFSLSHISATQSASPSTSESSDSPHSTSPPTNANASLPKPHVFRRLSAHR
MRSLSLGHRASDDAQDLDNKPWSSGGPALFSRSPTEDSVSWSRIFASSFD
LRDKTRWRKRNYSYSCSDFEIEEEHHIVEIGQRLPDRCHSGTEEDVFGRR
RRDFSIASFSLPAVSASRLLACDTNHSPLPPPPQPRADDVSTRPSSIKHS
SKSSAERRVKEKQKHLLDTPMTKPDRNSKSALIKEATNDDFDEQEAIRHI
TKAIDSSKGRLRKSANMSKAFTSVIKSGDGFLRKSELIQQTLNSEDSKDP
SMIILLDPESCEPSPIRVEGASSASEESASVENMKSVHVVPPPNIGFSTS
MTARQCAATLETILRDMACKVSRYAEEEHGKNSIVKLKASRFSGGARLLD
RKVKVLVTVREEDHIRTSVSFRRVATMYGNKDAHFPMCCEIRERFQREWP
AVVEALYIRVESNQVLSTRSAEG*