Ggra1405.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1405.t1
Unique NameGgra1405.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length453
Homology
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BLAST of Ggra1405.t1 vs. uniprot
Match: A0A2V3IMB1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMB1_9FLOR)

HSP 1 Score: 322 bits (824), Expect = 2.840e-105
Identity = 166/251 (66.14%), Postives = 194/251 (77.29%), Query Frame = 0 
Query:  202 MGDRFPSFLHAFPKQRDFEAQLRWLLPRASHAELAPDAAARRLWLSAAAFYVTRLNARSASHVRAAVARVLRGAHWPSPANLIGAPLRASDKCRGNRAHRGPGEMDCVTLAEVGDTVMRLALMQPALTHVVLSSEDAAAVSDHKVRAAFGAVAGRQPLRVLRFENDLSPGTGNTNRVLSKLRVKQARLLRSMLVVLHLQALAELHVLTPRSTFHSLIAALANTTPGKRRHVTFPLGSWRDLNASVGSQLLR 452
            MG RF  FLH+FP Q DF  Q++ L+P A    L P+A ARRLWLSAAAFY TRLN R A+ VR+ V + L     P P  LIG P+RASDKC  NR H GPGEM C+TL E  D VMRLALMQP LTHV+++SEDA A+S+ KVR AFG    R+PL V+R+  D+ PGTG+TNRVL KL  KQA+LL SML+VLH+QALAE HVLTPRSTFHSLIAALANTTPGK+RHVTFPLG+WRDLN+S+GSQL+R
Sbjct:    1 MGKRFSDFLHSFPYQDDFVEQVKRLVPSAPLDVLKPEAHARRLWLSAAAFYTTRLNNRVAARVRSEVEKALIANGRPGPPRLIGVPVRASDKCYDNRKHPGPGEMTCMTLEETADVVMRLALMQPELTHVIITSEDAGAISEDKVRDAFGGFPFRKPLHVVRYVEDVQPGTGHTNRVLKKLGKKQAQLLDSMLIVLHMQALAEFHVLTPRSTFHSLIAALANTTPGKKRHVTFPLGTWRDLNSSIGSQLVR 251
[Close]
BLAST of Ggra1405.t1 vs. uniprot
Match: A0A2V3IMA3 (FUT8_N_cat domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMA3_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 8.130e-48
Identity = 94/182 (51.65%), Postives = 125/182 (68.68%), Query Frame = 0 
Query:    1 MASRLASALALLTLTLVLTLGVLTSLLRARA---------PTSTPRKPR--TPRAFLRRWASAWSDYSALRDAPLGEPLAELVAALHAHQNPSNCARAHFLLFEYRSSLGFGAQIRHLLVAFYAALQTRRVLLLSERHPFYWASGCETRAHNRRFTCHFRALSDSCPFAAVDALRRRGALRV 171
            MA RLA+A A L L+++L L + T +L   +         P +T  +P+  T  +F+  WASAW DYSALRDAPLG+ LA+LV AL  HQNP +CA+  +L+FEYR++LGFG+QIRH++ AFY ALQT RV +LS+   FYWA+GC  +A+NRRF CHFR LS +CPF+ V  L   G + V
Sbjct:    1 MAGRLANAFAALVLSILLALFISTGILGVPSRVSRLLRVLPNATRVEPQFTTDFSFIIHWASAWDDYSALRDAPLGDILADLVEALDQHQNPVDCAKVSYLIFEYRTALGFGSQIRHIIAAFYTALQTDRVFVLSDGLSFYWANGCPDKANNRRFICHFRPLSQTCPFSRVKKLIDGGRIPV 182
The following BLAST results are available for this feature:
BLAST of Ggra1405.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMB12.840e-10566.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMA38.130e-4851.65FUT8_N_cat domain-containing protein n=1 Tax=Graci... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045573Alpha-(1,6)-fucosyltransferase, N- and catalytic domainPFAMPF19745FUT8_N_catcoord: 59..138
e-value: 1.3E-7
score: 30.8
NoneNo IPR availablePANTHERPTHR13132:SF29ALPHA-(1,6)-FUCOSYLTRANSFERASEcoord: 74..423
NoneNo IPR availablePANTHERPTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEcoord: 74..423
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..452
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000169_piloncontigtig00000169_pilon:189203..190665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1405.t1Ggra1405.t1Gracilaria gracilis GNS1m malemRNAtig00000169_pilon 189203..190665 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1405.t1 ID=Ggra1405.t1|Name=Ggra1405.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=453bp
MASRLASALALLTLTLVLTLGVLTSLLRARAPTSTPRKPRTPRAFLRRWA
SAWSDYSALRDAPLGEPLAELVAALHAHQNPSNCARAHFLLFEYRSSLGF
GAQIRHLLVAFYAALQTRRVLLLSERHPFYWASGCETRAHNRRFTCHFRA
LSDSCPFAAVDALRRRGALRVVRANYSSVEHWARYNAYSGAPSVMILSQQ
QMGDRFPSFLHAFPKQRDFEAQLRWLLPRASHAELAPDAAARRLWLSAAA
FYVTRLNARSASHVRAAVARVLRGAHWPSPANLIGAPLRASDKCRGNRAH
RGPGEMDCVTLAEVGDTVMRLALMQPALTHVVLSSEDAAAVSDHKVRAAF
GAVAGRQPLRVLRFENDLSPGTGNTNRVLSKLRVKQARLLRSMLVVLHLQ
ALAELHVLTPRSTFHSLIAALANTTPGKRRHVTFPLGSWRDLNASVGSQL
LR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045573Fut8_N_cat