Ggra1278.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1278.t1
Unique NameGgra1278.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length886
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.230.130Cullin; Chain C, Domain 2coord: 646..792
e-value: 6.9E-12
score: 47.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 5..30
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 657..731
score: 9.200208
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 654..735

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000235_piloncontigtig00000235_pilon:10825..13482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1278.t1Ggra1278.t1Gracilaria gracilis GNS1m malemRNAtig00000235_pilon 10825..13482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=886bp
MSDPTSLLKRLSIDEPQQQSARPALHHDSETAQQVSNTWVGIRNAVVHFL
RTTPLEGTSSHDGDESNPQVRKEYIKAFSQSVLMSRQLQSPSGIKNDLLI
VLLLRDQQFEHNLKALVQLIIEALFPHCWGTPPPSNLSNRIQMLDSFHWK
MQCWFMLRDALNSFLQPSQMIKMGIEQKSQVYRIMDHILCQHDVFSRILI
NVRTEHGQLLTDLRFSHQTWTSLTSADSRETIHAVQSFFYFLQLCGSEEA
DPKAAIANYVFQLQQTLSAWTTLFKIARREICRVQEDAYPAMLSAAMKLS
QVGENWTETENFISLHAFANQNVVGLEVIQNKCVWDTIDFFETACYIKYP
FHLQAGYGVSALLLQSNRQPFLRAILNSFQIVSEYGHFQDLLSELNRLWD
ADWVSMRGVFRVPLHPHDLLSAWKWIEMFNLSNPCLKVFESTLVKCFWDK
LSVLHLPHDDGYISLKQLFQRIVTMRKRTQGNLGVSMDKDSFILQVMKAL
AIVSKSMLPPHKLRKFLNFVRNAILKNFLADKVDEGFAHAISEFFRLQGL
SHNFIEEISTFSVTRTACAGNDKWSDQTLDPPEAETSALQRSWSNGNLQK
RWMSVTEEDHFQPYIKHHTNDGSLHFGFPSKVIHLASLLAIESGTIDDEC
PLPLLRLPPELSLVQSYAASHYKSIYPFRKISHFNHLSTVEVSTCFFSQS
SNQPISFTVNLYQACVLKFFEQYQTASLEQIFAQLIVDDITEEQREQEKF
RIRQAVVSLSTERAPMVMWEEDGEGSERCFGLNENWSPSRLPKFVLLFDN
AFISCLDEKAERRIRGSVDLGIMRILRYHGFGLTYSRKRIVAEVFAARVH
SYITRLYIEKRIEHLIQSKMIVGNANFLRLQIRVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016158Cullin_homology
IPR036317Cullin_homology_sf