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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1278.t1.start1 | Ggra1278.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000235_pilon 13480..13482 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=886bp MSDPTSLLKRLSIDEPQQQSARPALHHDSETAQQVSNTWVGIRNAVVHFL RTTPLEGTSSHDGDESNPQVRKEYIKAFSQSVLMSRQLQSPSGIKNDLLI VLLLRDQQFEHNLKALVQLIIEALFPHCWGTPPPSNLSNRIQMLDSFHWK MQCWFMLRDALNSFLQPSQMIKMGIEQKSQVYRIMDHILCQHDVFSRILI NVRTEHGQLLTDLRFSHQTWTSLTSADSRETIHAVQSFFYFLQLCGSEEA DPKAAIANYVFQLQQTLSAWTTLFKIARREICRVQEDAYPAMLSAAMKLS QVGENWTETENFISLHAFANQNVVGLEVIQNKCVWDTIDFFETACYIKYP FHLQAGYGVSALLLQSNRQPFLRAILNSFQIVSEYGHFQDLLSELNRLWD ADWVSMRGVFRVPLHPHDLLSAWKWIEMFNLSNPCLKVFESTLVKCFWDK LSVLHLPHDDGYISLKQLFQRIVTMRKRTQGNLGVSMDKDSFILQVMKAL AIVSKSMLPPHKLRKFLNFVRNAILKNFLADKVDEGFAHAISEFFRLQGL SHNFIEEISTFSVTRTACAGNDKWSDQTLDPPEAETSALQRSWSNGNLQK RWMSVTEEDHFQPYIKHHTNDGSLHFGFPSKVIHLASLLAIESGTIDDEC PLPLLRLPPELSLVQSYAASHYKSIYPFRKISHFNHLSTVEVSTCFFSQS SNQPISFTVNLYQACVLKFFEQYQTASLEQIFAQLIVDDITEEQREQEKF RIRQAVVSLSTERAPMVMWEEDGEGSERCFGLNENWSPSRLPKFVLLFDN AFISCLDEKAERRIRGSVDLGIMRILRYHGFGLTYSRKRIVAEVFAARVH SYITRLYIEKRIEHLIQSKMIVGNANFLRLQIRVN* back to topspliced messenger RNA >Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2658bp|location=Sequence derived from alignment at tig00000235_pilon:10825..13482- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGTCTGATCCTACTTCTTTACTGAAGCGACTCTCTATTGATGAACCTCA ACAGCAATCTGCGCGTCCAGCACTGCATCATGATAGCGAAACGGCGCAAC AAGTTTCTAACACCTGGGTTGGAATTAGAAACGCCGTTGTTCATTTCCTT CGTACAACACCACTTGAAGGGACTTCTTCTCATGATGGCGATGAAAGCAA CCCTCAAGTGCGCAAAGAGTACATCAAAGCCTTTTCACAAAGCGTTCTCA TGTCTCGTCAACTTCAGTCACCCTCAGGGATTAAGAACGATTTGCTTATT GTCCTTCTTTTGCGTGATCAACAGTTTGAGCACAACCTGAAAGCGCTCGT ACAGCTCATTATAGAGGCACTTTTTCCCCACTGTTGGGGTACTCCTCCAC CTTCGAATCTTAGCAATCGCATTCAAATGCTTGACTCGTTTCATTGGAAA ATGCAGTGCTGGTTTATGTTACGAGATGCGCTGAATTCTTTCTTGCAGCC AAGTCAAATGATTAAAATGGGTATTGAACAAAAATCTCAAGTCTACCGAA TCATGGACCACATTCTCTGCCAACATGATGTCTTTTCTCGAATTCTGATA AACGTTCGCACCGAACATGGCCAACTCTTGACAGATCTTAGGTTTTCGCA TCAAACATGGACATCGTTGACATCAGCAGATTCAAGGGAGACGATACACG CTGTGCAGTCATTTTTTTACTTTTTGCAGCTTTGTGGATCGGAGGAAGCT GACCCCAAAGCGGCAATTGCCAATTATGTTTTTCAGCTACAGCAAACTCT TTCAGCGTGGACAACCCTTTTCAAAATAGCTAGGCGGGAGATCTGCCGTG TGCAAGAAGATGCCTACCCTGCGATGCTATCTGCTGCAATGAAGCTGTCA CAAGTCGGTGAGAATTGGACAGAAACAGAAAACTTCATATCCCTCCATGC TTTTGCAAATCAGAACGTTGTAGGACTCGAAGTCATACAGAACAAATGTG TGTGGGATACTATTGATTTTTTTGAGACTGCATGTTATATTAAATATCCC TTTCATCTTCAAGCTGGTTATGGAGTGTCTGCGCTACTTCTTCAGAGCAA CCGACAACCATTCTTGAGGGCAATTCTCAACAGTTTTCAAATCGTTTCAG AATACGGACACTTCCAGGATCTACTGTCAGAGCTCAACCGTCTATGGGAC GCTGATTGGGTATCGATGCGGGGGGTCTTTCGTGTTCCCCTACATCCCCA TGATCTGCTTTCGGCTTGGAAATGGATAGAAATGTTCAATCTGTCGAATC CATGTCTGAAAGTCTTCGAATCGACATTGGTGAAATGTTTCTGGGATAAG CTTTCGGTTTTGCACCTTCCACACGACGATGGTTATATCTCTTTGAAACA GTTGTTCCAGAGAATTGTGACCATGCGGAAACGGACGCAGGGTAATCTTG GGGTTTCAATGGACAAAGACTCTTTTATACTTCAGGTAATGAAAGCCCTG GCTATCGTTTCGAAATCGATGTTGCCACCTCACAAGTTGCGCAAATTCCT CAATTTCGTTCGGAACGCAATACTGAAGAATTTCCTAGCAGACAAAGTGG ATGAAGGTTTCGCCCACGCTATTTCGGAGTTCTTTCGACTTCAAGGTCTG TCGCATAACTTCATTGAAGAAATCTCAACTTTCTCCGTTACTAGAACAGC ATGTGCAGGTAACGATAAGTGGTCTGACCAGACTTTAGATCCTCCTGAAG CCGAAACTAGTGCACTACAGCGATCGTGGTCTAACGGAAATCTGCAAAAG AGGTGGATGTCAGTTACCGAAGAAGATCATTTTCAGCCATATATCAAGCA TCACACCAATGATGGTTCCTTGCACTTTGGATTCCCATCCAAAGTGATTC ATCTGGCCTCTCTCCTTGCAATCGAATCGGGAACAATTGACGATGAATGT CCGCTTCCGCTTCTTCGGCTCCCTCCAGAACTTTCTCTTGTCCAATCTTA CGCCGCTTCCCACTACAAGAGTATTTATCCTTTCCGAAAGATCTCCCATT TTAACCACCTCAGCACAGTTGAGGTTTCTACCTGCTTCTTCTCACAGTCA TCAAATCAACCAATTTCATTCACCGTCAACCTTTACCAGGCATGTGTCCT CAAATTCTTTGAACAATACCAAACTGCTTCTTTGGAACAGATTTTTGCAC AGCTGATAGTTGATGACATCACGGAAGAGCAGCGTGAGCAAGAGAAATTT CGTATTCGACAGGCAGTAGTGTCGTTAAGCACTGAAAGGGCACCCATGGT GATGTGGGAGGAGGATGGGGAAGGAAGCGAAAGATGTTTCGGATTGAATG AGAATTGGAGTCCTTCAAGGCTGCCGAAATTTGTTTTGCTTTTCGACAAT GCTTTCATTTCGTGTTTGGATGAAAAGGCAGAAAGAAGAATTCGAGGTTC AGTTGATCTGGGGATCATGAGGATCCTGCGTTACCATGGCTTTGGTTTGA CCTACTCGCGCAAAAGGATAGTTGCCGAAGTTTTCGCGGCCAGAGTTCAT TCTTACATTACTAGGCTGTATATTGAGAAGCGCATTGAGCACTTAATCCA GTCCAAAATGATTGTAGGAAACGCAAACTTTCTAAGACTTCAGATAAGGG TAAATTGA back to topprotein sequence of Ggra1278.t1 >Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=886bp
MSDPTSLLKRLSIDEPQQQSARPALHHDSETAQQVSNTWVGIRNAVVHFL RTTPLEGTSSHDGDESNPQVRKEYIKAFSQSVLMSRQLQSPSGIKNDLLI VLLLRDQQFEHNLKALVQLIIEALFPHCWGTPPPSNLSNRIQMLDSFHWK MQCWFMLRDALNSFLQPSQMIKMGIEQKSQVYRIMDHILCQHDVFSRILI NVRTEHGQLLTDLRFSHQTWTSLTSADSRETIHAVQSFFYFLQLCGSEEA DPKAAIANYVFQLQQTLSAWTTLFKIARREICRVQEDAYPAMLSAAMKLS QVGENWTETENFISLHAFANQNVVGLEVIQNKCVWDTIDFFETACYIKYP FHLQAGYGVSALLLQSNRQPFLRAILNSFQIVSEYGHFQDLLSELNRLWD ADWVSMRGVFRVPLHPHDLLSAWKWIEMFNLSNPCLKVFESTLVKCFWDK LSVLHLPHDDGYISLKQLFQRIVTMRKRTQGNLGVSMDKDSFILQVMKAL AIVSKSMLPPHKLRKFLNFVRNAILKNFLADKVDEGFAHAISEFFRLQGL SHNFIEEISTFSVTRTACAGNDKWSDQTLDPPEAETSALQRSWSNGNLQK RWMSVTEEDHFQPYIKHHTNDGSLHFGFPSKVIHLASLLAIESGTIDDEC PLPLLRLPPELSLVQSYAASHYKSIYPFRKISHFNHLSTVEVSTCFFSQS SNQPISFTVNLYQACVLKFFEQYQTASLEQIFAQLIVDDITEEQREQEKF RIRQAVVSLSTERAPMVMWEEDGEGSERCFGLNENWSPSRLPKFVLLFDN AFISCLDEKAERRIRGSVDLGIMRILRYHGFGLTYSRKRIVAEVFAARVH SYITRLYIEKRIEHLIQSKMIVGNANFLRLQIRVN* back to topmRNA from alignment at tig00000235_pilon:10825..13482- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2658bp|location=Sequence derived from alignment at tig00000235_pilon:10825..13482- (Gracilaria gracilis GNS1m male) ATGTCTGATCCTACTTCTTTACTGAAGCGACTCTCTATTGATGAACCTCA
ACAGCAATCTGCGCGTCCAGCACTGCATCATGATAGCGAAACGGCGCAAC
AAGTTTCTAACACCTGGGTTGGAATTAGAAACGCCGTTGTTCATTTCCTT
CGTACAACACCACTTGAAGGGACTTCTTCTCATGATGGCGATGAAAGCAA
CCCTCAAGTGCGCAAAGAGTACATCAAAGCCTTTTCACAAAGCGTTCTCA
TGTCTCGTCAACTTCAGTCACCCTCAGGGATTAAGAACGATTTGCTTATT
GTCCTTCTTTTGCGTGATCAACAGTTTGAGCACAACCTGAAAGCGCTCGT
ACAGCTCATTATAGAGGCACTTTTTCCCCACTGTTGGGGTACTCCTCCAC
CTTCGAATCTTAGCAATCGCATTCAAATGCTTGACTCGTTTCATTGGAAA
ATGCAGTGCTGGTTTATGTTACGAGATGCGCTGAATTCTTTCTTGCAGCC
AAGTCAAATGATTAAAATGGGTATTGAACAAAAATCTCAAGTCTACCGAA
TCATGGACCACATTCTCTGCCAACATGATGTCTTTTCTCGAATTCTGATA
AACGTTCGCACCGAACATGGCCAACTCTTGACAGATCTTAGGTTTTCGCA
TCAAACATGGACATCGTTGACATCAGCAGATTCAAGGGAGACGATACACG
CTGTGCAGTCATTTTTTTACTTTTTGCAGCTTTGTGGATCGGAGGAAGCT
GACCCCAAAGCGGCAATTGCCAATTATGTTTTTCAGCTACAGCAAACTCT
TTCAGCGTGGACAACCCTTTTCAAAATAGCTAGGCGGGAGATCTGCCGTG
TGCAAGAAGATGCCTACCCTGCGATGCTATCTGCTGCAATGAAGCTGTCA
CAAGTCGGTGAGAATTGGACAGAAACAGAAAACTTCATATCCCTCCATGC
TTTTGCAAATCAGAACGTTGTAGGACTCGAAGTCATACAGAACAAATGTG
TGTGGGATACTATTGATTTTTTTGAGACTGCATGTTATATTAAATATCCC
TTTCATCTTCAAGCTGGTTATGGAGTGTCTGCGCTACTTCTTCAGAGCAA
CCGACAACCATTCTTGAGGGCAATTCTCAACAGTTTTCAAATCGTTTCAG
AATACGGACACTTCCAGGATCTACTGTCAGAGCTCAACCGTCTATGGGAC
GCTGATTGGGTATCGATGCGGGGGGTCTTTCGTGTTCCCCTACATCCCCA
TGATCTGCTTTCGGCTTGGAAATGGATAGAAATGTTCAATCTGTCGAATC
CATGTCTGAAAGTCTTCGAATCGACATTGGTGAAATGTTTCTGGGATAAG
CTTTCGGTTTTGCACCTTCCACACGACGATGGTTATATCTCTTTGAAACA
GTTGTTCCAGAGAATTGTGACCATGCGGAAACGGACGCAGGGTAATCTTG
GGGTTTCAATGGACAAAGACTCTTTTATACTTCAGGTAATGAAAGCCCTG
GCTATCGTTTCGAAATCGATGTTGCCACCTCACAAGTTGCGCAAATTCCT
CAATTTCGTTCGGAACGCAATACTGAAGAATTTCCTAGCAGACAAAGTGG
ATGAAGGTTTCGCCCACGCTATTTCGGAGTTCTTTCGACTTCAAGGTCTG
TCGCATAACTTCATTGAAGAAATCTCAACTTTCTCCGTTACTAGAACAGC
ATGTGCAGGTAACGATAAGTGGTCTGACCAGACTTTAGATCCTCCTGAAG
CCGAAACTAGTGCACTACAGCGATCGTGGTCTAACGGAAATCTGCAAAAG
AGGTGGATGTCAGTTACCGAAGAAGATCATTTTCAGCCATATATCAAGCA
TCACACCAATGATGGTTCCTTGCACTTTGGATTCCCATCCAAAGTGATTC
ATCTGGCCTCTCTCCTTGCAATCGAATCGGGAACAATTGACGATGAATGT
CCGCTTCCGCTTCTTCGGCTCCCTCCAGAACTTTCTCTTGTCCAATCTTA
CGCCGCTTCCCACTACAAGAGTATTTATCCTTTCCGAAAGATCTCCCATT
TTAACCACCTCAGCACAGTTGAGGTTTCTACCTGCTTCTTCTCACAGTCA
TCAAATCAACCAATTTCATTCACCGTCAACCTTTACCAGGCATGTGTCCT
CAAATTCTTTGAACAATACCAAACTGCTTCTTTGGAACAGATTTTTGCAC
AGCTGATAGTTGATGACATCACGGAAGAGCAGCGTGAGCAAGAGAAATTT
CGTATTCGACAGGCAGTAGTGTCGTTAAGCACTGAAAGGGCACCCATGGT
GATGTGGGAGGAGGATGGGGAAGGAAGCGAAAGATGTTTCGGATTGAATG
AGAATTGGAGTCCTTCAAGGCTGCCGAAATTTGTTTTGCTTTTCGACAAT
GCTTTCATTTCGTGTTTGGATGAAAAGGCAGAAAGAAGAATTCGAGGTTC
AGTTGATCTGGGGATCATGAGGATCCTGCGTTACCATGGCTTTGGTTTGA
CCTACTCGCGCAAAAGGATAGTTGCCGAAGTTTTCGCGGCCAGAGTTCAT
TCTTACATTACTAGGCTGTATATTGAGAAGCGCATTGAGCACTTAATCCA
GTCCAAAATGATTGTAGGAAACGCAAACTTTCTAAGACTTCAGATAAGGG
TAAATTGA back to topCoding sequence (CDS) from alignment at tig00000235_pilon:10825..13482- >Ggra1278.t1 ID=Ggra1278.t1|Name=Ggra1278.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2658bp|location=Sequence derived from alignment at tig00000235_pilon:10825..13482- (Gracilaria gracilis GNS1m male) ATGTCTGATCCTACTTCTTTACTGAAGCGACTCTCTATTGATGAACCTCA ACAGCAATCTGCGCGTCCAGCACTGCATCATGATAGCGAAACGGCGCAAC AAGTTTCTAACACCTGGGTTGGAATTAGAAACGCCGTTGTTCATTTCCTT CGTACAACACCACTTGAAGGGACTTCTTCTCATGATGGCGATGAAAGCAA CCCTCAAGTGCGCAAAGAGTACATCAAAGCCTTTTCACAAAGCGTTCTCA TGTCTCGTCAACTTCAGTCACCCTCAGGGATTAAGAACGATTTGCTTATT GTCCTTCTTTTGCGTGATCAACAGTTTGAGCACAACCTGAAAGCGCTCGT ACAGCTCATTATAGAGGCACTTTTTCCCCACTGTTGGGGTACTCCTCCAC CTTCGAATCTTAGCAATCGCATTCAAATGCTTGACTCGTTTCATTGGAAA ATGCAGTGCTGGTTTATGTTACGAGATGCGCTGAATTCTTTCTTGCAGCC AAGTCAAATGATTAAAATGGGTATTGAACAAAAATCTCAAGTCTACCGAA TCATGGACCACATTCTCTGCCAACATGATGTCTTTTCTCGAATTCTGATA AACGTTCGCACCGAACATGGCCAACTCTTGACAGATCTTAGGTTTTCGCA TCAAACATGGACATCGTTGACATCAGCAGATTCAAGGGAGACGATACACG CTGTGCAGTCATTTTTTTACTTTTTGCAGCTTTGTGGATCGGAGGAAGCT GACCCCAAAGCGGCAATTGCCAATTATGTTTTTCAGCTACAGCAAACTCT TTCAGCGTGGACAACCCTTTTCAAAATAGCTAGGCGGGAGATCTGCCGTG TGCAAGAAGATGCCTACCCTGCGATGCTATCTGCTGCAATGAAGCTGTCA CAAGTCGGTGAGAATTGGACAGAAACAGAAAACTTCATATCCCTCCATGC TTTTGCAAATCAGAACGTTGTAGGACTCGAAGTCATACAGAACAAATGTG TGTGGGATACTATTGATTTTTTTGAGACTGCATGTTATATTAAATATCCC TTTCATCTTCAAGCTGGTTATGGAGTGTCTGCGCTACTTCTTCAGAGCAA CCGACAACCATTCTTGAGGGCAATTCTCAACAGTTTTCAAATCGTTTCAG AATACGGACACTTCCAGGATCTACTGTCAGAGCTCAACCGTCTATGGGAC GCTGATTGGGTATCGATGCGGGGGGTCTTTCGTGTTCCCCTACATCCCCA TGATCTGCTTTCGGCTTGGAAATGGATAGAAATGTTCAATCTGTCGAATC CATGTCTGAAAGTCTTCGAATCGACATTGGTGAAATGTTTCTGGGATAAG CTTTCGGTTTTGCACCTTCCACACGACGATGGTTATATCTCTTTGAAACA GTTGTTCCAGAGAATTGTGACCATGCGGAAACGGACGCAGGGTAATCTTG GGGTTTCAATGGACAAAGACTCTTTTATACTTCAGGTAATGAAAGCCCTG GCTATCGTTTCGAAATCGATGTTGCCACCTCACAAGTTGCGCAAATTCCT CAATTTCGTTCGGAACGCAATACTGAAGAATTTCCTAGCAGACAAAGTGG ATGAAGGTTTCGCCCACGCTATTTCGGAGTTCTTTCGACTTCAAGGTCTG TCGCATAACTTCATTGAAGAAATCTCAACTTTCTCCGTTACTAGAACAGC ATGTGCAGGTAACGATAAGTGGTCTGACCAGACTTTAGATCCTCCTGAAG CCGAAACTAGTGCACTACAGCGATCGTGGTCTAACGGAAATCTGCAAAAG AGGTGGATGTCAGTTACCGAAGAAGATCATTTTCAGCCATATATCAAGCA TCACACCAATGATGGTTCCTTGCACTTTGGATTCCCATCCAAAGTGATTC ATCTGGCCTCTCTCCTTGCAATCGAATCGGGAACAATTGACGATGAATGT CCGCTTCCGCTTCTTCGGCTCCCTCCAGAACTTTCTCTTGTCCAATCTTA CGCCGCTTCCCACTACAAGAGTATTTATCCTTTCCGAAAGATCTCCCATT TTAACCACCTCAGCACAGTTGAGGTTTCTACCTGCTTCTTCTCACAGTCA TCAAATCAACCAATTTCATTCACCGTCAACCTTTACCAGGCATGTGTCCT CAAATTCTTTGAACAATACCAAACTGCTTCTTTGGAACAGATTTTTGCAC AGCTGATAGTTGATGACATCACGGAAGAGCAGCGTGAGCAAGAGAAATTT CGTATTCGACAGGCAGTAGTGTCGTTAAGCACTGAAAGGGCACCCATGGT GATGTGGGAGGAGGATGGGGAAGGAAGCGAAAGATGTTTCGGATTGAATG AGAATTGGAGTCCTTCAAGGCTGCCGAAATTTGTTTTGCTTTTCGACAAT GCTTTCATTTCGTGTTTGGATGAAAAGGCAGAAAGAAGAATTCGAGGTTC AGTTGATCTGGGGATCATGAGGATCCTGCGTTACCATGGCTTTGGTTTGA CCTACTCGCGCAAAAGGATAGTTGCCGAAGTTTTCGCGGCCAGAGTTCAT TCTTACATTACTAGGCTGTATATTGAGAAGCGCATTGAGCACTTAATCCA GTCCAAAATGATTGTAGGAAACGCAAACTTTCTAAGACTTCAGATAAGGG TAAATTGA back to top
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