Ggra1216.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1216.t1
Unique NameGgra1216.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length332
Homology
BLAST of Ggra1216.t1 vs. uniprot
Match: A0A2V3J1T6 (Beta-1,4 N-acetylgalactosaminyltransferase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1T6_9FLOR)

HSP 1 Score: 314 bits (805), Expect = 4.410e-95
Identity = 157/314 (50.00%), Postives = 220/314 (70.06%), Query Frame = 0
Query:    1 MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKKYKDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMNVIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPPADSESSVGRHHMLNATVSR----------------------GTHNGDVDIVGIRVRHLPSIDELDRIGIILPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNA 292
            MLAM T VGGQREL+T++TGVL  N +SYS+M NHT + L++VL HP+KY +VI  GTR+VR +FTT+ F +CV+ NL+  RR K+K++L  +E+ ++ + ++K V+ V++ VL+GV VE  HG+YNR+ VE S+E  +TIG+KT+VCD +I  QVE +V SI  +Y ++R +  NDGP  L NE+ ++++PF E H+ PADS  S GR++M+N T +R                             DIVG+RVR+LP IDEL+RIGII+P YVAN+T+  +RE+TLC WNEN+GPS++GI HPI V VLHNA
Sbjct:  718 MLAMSTDVGGQRELVTDQTGVLLTNFRSYSKMKNHTLDKLRDVLRHPEKYANVIENGTRIVRERFTTEKFCECVMSNLQRVRRQKDKELLAIKENLDEEHAVEKRVEDVAETVLEGVVVERYHGMYNRDHVERSIEGLVTIGIKTFVCDASIPKQVEYMVRSIRVNYPRVRVILANDGPKSLSNEQFLKDDPFIEEHLLPADSGISYGRNYMVNLTNTRYFVLLDDDHVFDDTTNLTLLVNAMRKESYDIVGLRVRNLPGIDELERIGIIIPRYVANVTNLRNRELTLCVWNENEGPSIFGITHPIPVHVLHNA 1031          
BLAST of Ggra1216.t1 vs. uniprot
Match: R7QNB3 (Transferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNB3_CHOCR)

HSP 1 Score: 216 bits (551), Expect = 6.430e-62
Identity = 123/314 (39.17%), Postives = 176/314 (56.05%), Query Frame = 0
Query:    1 MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKKYKDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMNVIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPPADSESSVGRHHMLNATVSR----------------------GTHNGDVDIVGIRVRHLPSIDELDRIGIILPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNA 292
            ML M T VGGQ+ELI   TG+L  N  S +   +     LQ + +    + D+  AGT  V ++FTT+ F  CVV N+  A+   EK      +         K ++ +   V + +  E +HGL+NR +V+ ++E  +T+G+KTYVCD +IV QV  LV SI  +Y  +R +  NDGP  + +  +++ +PFTE  + PADS  S+GR+ M N + +R                      G      D+VGIRVR+LP I+EL+RI I +P YVA ++ F DR VTLC WNEN+GP V  +  PI+VDVLHNA
Sbjct:  198 MLVMGTDVGGQKELIRTNTGILLPNLNSVTGSASFIVRQLQAITKFTPMFTDIQKAGTLEVHNRFTTEKFCDCVVDNMVRAKESLEKSSPNGAD--------DKAIEELRPKVAEIMKNERIHGLWNRGQVDRTIESEVTVGIKTYVCDPSIVRQVVGLVRSIRVNYPNVRILLANDGPTQVADAPIIKSDPFTEEIILPADSGISIGRNVMTNMSTTRYFVLLDDDHVFDEDTDLKIAVGGIGKEGFDVVGIRVRNLPGIEELERISIFIPRYVAKISKFEDRTVTLCVWNENNGPGVQTMRTPIRVDVLHNA 503          
BLAST of Ggra1216.t1 vs. uniprot
Match: A0A2V3ILR5 (D-inositol 3-phosphate glycosyltransferase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR5_9FLOR)

HSP 1 Score: 220 bits (561), Expect = 5.560e-61
Identity = 126/314 (40.13%), Postives = 182/314 (57.96%), Query Frame = 0
Query:    1 MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKKYKDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMNVIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPPADSESSVGRHHMLNATVSR----------------------GTHNGDVDIVGIRVRHLPSIDELDRIGIILPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNA 292
            +L M T VGGQ+ELI + TGVL  N  +   + +     L+ V +    +KD+  +GT+ VR++FTT+ F  CV+ N+  A++  E+   R R          K ++ +   V + +  E +HG +NR++V+  +E  +TI +KTYVCD +IV QV  LV SI  +Y ++R    NDGP  L N  +++ + +TE    PADS  S+GR+ M+N T +R                      G   GD DIVGIRVR+LP I+EL+RI I +P YVA ++ F +REVTLC WNEN+GP V  +  PI+VDVLHNA
Sbjct:  773 LLVMSTDVGGQKELIRSNTGVLLPNLSNPGALASFIVQQLKAVTKFSSMFKDMQVSGTQEVRTRFTTERFCDCVIDNMIRAKKQLERGPQRKRN--------DKAIEDMRGEVAEIMRGERIHGAWNRDQVDRRIENEVTIAIKTYVCDPSIVRQVLGLVRSIRVNYPRVRIFLANDGPTSLRNAALIKNDEYTEEVTLPADSGISIGRNIMVNMTTTRYFVLLDDDHVFDEDTDLGIAAEGIGKGDFDIVGIRVRNLPGIEELERISINIPRYVAKVSKFENREVTLCVWNENNGPGVQKMRVPIRVDVLHNA 1078          
BLAST of Ggra1216.t1 vs. uniprot
Match: R7QHA6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHA6_CHOCR)

HSP 1 Score: 204 bits (519), Expect = 4.280e-56
Identity = 132/382 (34.55%), Postives = 188/382 (49.21%), Query Frame = 0
Query:    1 MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKK-----------------------------------------------------YKDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMNVIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPPADSESSVGRHHMLNATVSR----------------------GTHNGDVDIVGIRVRHLPSIDELDRIGIILPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNACNYMQVRNVQQPEDW 307
            +L M T VGGQ+E++T+KTG+L  N++S SRM  HT + L+ V  +P                                                       ++ + + G  +V +K+TT+ F  CV+ N+E AR  +E Q+   R       V +    ++ D V+     E  HG +N    E SLE  +TIG+KTY+CD +I  QV  LV SI  H  + R +  NDGP L+G+   V ++P+TE    P +S  S GR+ M+N T +R                      G  N   D+VG+RVR+LP IDE +R  I++P YVA + S  +R +TLC WNEN+GPS+YGI HPI VDVLHNA  +M    V +   W
Sbjct:  334 LLVMTTDVGGQKEIVTSKTGILLPNYRSLSRMTAHTLDKLRAVAYNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFEKIASNGRDMVWNKYTTKNFASCVIDNVERARSLREGQV---RNTPLSTFVSEPISISLKDEVIMTAQAERYHGTWNMNGAERSLENSVTIGIKTYICDNSIAFQVAALVRSIRTHSPRTRILLGNDGPKLVGSYNFVHDDPYTEEVELPKNSGISFGRNVMVNLTRTRYFLLLDDDHLLDVTTNLTVLFEGIKNDHFDMVGLRVRNLPGIDEYERSRILIPRYVAKVQSLEERILTLCVWNENNGPSIYGITHPIPVDVLHNA--FMGRTEVLRKHPW 710          
BLAST of Ggra1216.t1 vs. uniprot
Match: A0A1X6NS94 (Glyco_trans_2-like domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS94_PORUM)

HSP 1 Score: 149 bits (376), Expect = 1.780e-36
Identity = 110/333 (33.03%), Postives = 159/333 (47.75%), Query Frame = 0
Query:    1 MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKK-----------YKDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMNVIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPPADSESSVGRHHMLNAT-------------------VSRGTHNGDV----------DIVGIRVRHLPSIDELD-RIGIILPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNA 292
            +L M T VGGQ E++T  TGVL         +L+     L+ +   P             Y  V AAG   V ++FT   F  CV H L GA R      L +R           G   V+ +    V  E  HG++ RE+V   +   +T+G+K+YVCD ++   +  LV SI  +Y  +R +  NDGP+ L  E  +  +   E      DS  SVGR+ +++A                    ++R     D           D++G+RVR+LP I EL+  + I++P YVA +T+F  R VTLC WNEN GPSV G+  P++VDV+HNA
Sbjct:  330 LLVMTTDVGGQAEVVTPHTGVLLPADTPRDALLDLIGEHLEALSGAPDAIGSTAHRLGVDYAAVAAAGAAAVATRFTKAAFLGCVSHALLGAPRQPPPPWLYTRG----------GRARVAANTAVVVERERRHGVWQREQVRRPVAAALTVGIKSYVCDASVGATLRRLVASIRDYYPAVRVLIANDGPLALSAEPWLATDAHAEELRLAGDSGISVGRNALVDAATTPYILLLDDDHLFDEQTDLARLVRAADGXXXXXXXARWDVLGMRVRNLPGIAELESHVDIVIPRYVARVTAFRGRRVTLCVWNENLGPSVVGLTTPLRVDVVHNA 652          
BLAST of Ggra1216.t1 vs. uniprot
Match: A0A1X6NS02 (Glyco_trans_2-like domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS02_PORUM)

HSP 1 Score: 94.4 bits (233), Expect = 1.250e-17
Identity = 63/189 (33.33%), Postives = 94/189 (49.74%), Query Frame = 0
Query:  139 MTIGVKTYVCDETIVCQVENLVHSIHAHYLKIRDVPTNDGP-MLLGNEEVVRENPFTELHVPPADSESSVGRHHM-----------------------LNATVSRGTHNGDVDIVGIRVRHLP----------SIDELDRIGII-LPIYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNA 292
            +T+G+K++ CD ++V  +  L+ SI + Y  +R    ND   ++L        +P TE    PAD   S GR+ +                       L A +      G  D+VG+RVR+LP          ++D   R+  + +P YVAN+TS   R +TLC WNEN GPSV G+  P++VDV+HNA
Sbjct:  390 VTVGIKSHPCDASVVGTLRGLLRSIRSVYPDVRVAVANDARGVVLAALPWFAADPHTEELRLPADVGISAGRNALVDAASTPYLLLVDDDHVFDEQTDLRALLRAADTGGGWDVVGLRVRNLPGMAQMEAHLNAVDARGRVDAVPIPRYVANVTSLAARTLTLCVWNENRGPSVAGLTVPLRVDVVHNA 578          
The following BLAST results are available for this feature:
BLAST of Ggra1216.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J1T64.410e-9550.00Beta-1,4 N-acetylgalactosaminyltransferase 1 n=1 T... [more]
R7QNB36.430e-6239.17Transferase n=1 Tax=Chondrus crispus TaxID=2769 Re... [more]
A0A2V3ILR55.560e-6140.13D-inositol 3-phosphate glycosyltransferase 1 n=1 T... [more]
R7QHA64.280e-5634.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NS941.780e-3633.03Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A1X6NS021.250e-1733.33Glyco_trans_2-like domain-containing protein n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000926_piloncontigtig00000926_pilon:79864..80935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1216.t1Ggra1216.t1Gracilaria gracilis GNS1m malemRNAtig00000926_pilon 79864..80935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1216.t1 ID=Ggra1216.t1|Name=Ggra1216.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=332bp
MLAMWTYVGGQRELITNKTGVLQNNHQSYSRMLNHTWNSLQEVLEHPKKY
KDVIAAGTRLVRSKFTTQMFGKCVVHNLEGARRWKEKQMLRSREHWEDMN
VIQKGVDAVSDHVLDGVAVETVHGLYNRERVESSLERFMTIGVKTYVCDE
TIVCQVENLVHSIHAHYLKIRDVPTNDGPMLLGNEEVVRENPFTELHVPP
ADSESSVGRHHMLNATVSRGTHNGDVDIVGIRVRHLPSIDELDRIGIILP
IYVANMTSFNDREVTLCAWNENDGPSVYGIMHPIQVDVLHNACNYMQVRN
VQQPEDWTLPNTKHVMGRLAFVPPPTLKNGA*
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