Ggra1199.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1199.t1
Unique NameGgra1199.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length379
Homology
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A2V3IME2 (DNA polymerase II subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME2_9FLOR)

HSP 1 Score: 588 bits (1515), Expect = 4.210e-204
Identity = 290/406 (71.43%), Postives = 332/406 (81.77%), Query Frame = 0
Query:    1 MFRSRYDVMLNKPLEDPKLKLLMSELQSVSRSR------------------------------IWYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            MFR+RY+++L+K L +PK K  ++   S+S S                                WYLEDLN  +K DLSE  +TSGMHTE SFVIAQGQ+ E + EEP+FK   + TPP ESRED+I+ALGRDAN FGG FDM+E  +L+K+EEQSL+T FLF SDVALDNSRV AGLRHIWK FLEDGVVPSVI+LMG+FLSH FG+KP+DVSTLC+K GELG+M+K+EF++LI++TTFVI+PG NDPGPGNVLPRPPMPQMITK+FVE VGSE+VH ATNPC+IRFITQEIVILR+DLMQKMIRHCAVKPDL EA LMHTHLVKTVSDQ YLTPLPLSARP+LWAHDH LWLFP PHV+VLAD+VDSYICTYE NLGMNPGSFKTDFSFLVYLPAEKRAQQSSL
Sbjct:  139 MFRARYELILSKTLRNPKFKPPVAGSFSLSSSSPYYHLTGIESLSGRKGDQLVLGLLTQLEEGSWYLEDLNGTIKVDLSEACITSGMHTEGSFVIAQGQIIEHRDEEPLFKVHAMGTPPHESREDSIIALGRDANLFGGEFDMNEALNLVKVEEQSLDTTFLFFSDVALDNSRVLAGLRHIWKGFLEDGVVPSVIILMGSFLSHPFGQKPNDVSTLCDKFGELGSMIKNEFEQLIEETTFVIIPGANDPGPGNVLPRPPMPQMITKQFVEVVGSESVHFATNPCRIRFITQEIVILRDDLMQKMIRHCAVKPDLAEAGLMHTHLVKTVSDQSYLTPLPLSARPILWAHDHALWLFPNPHVLVLADRVDSYICTYENNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 544          
BLAST of Ggra1199.t1 vs. uniprot
Match: R7QAS8 (DNA polymerase II subunit 2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAS8_CHOCR)

HSP 1 Score: 460 bits (1184), Expect = 2.140e-155
Identity = 225/406 (55.42%), Postives = 290/406 (71.43%), Query Frame = 0
Query:    1 MFRSRYDVMLNKPLEDPKLKLLMSELQSVSRSR------------------------------IWYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            MFRSRY+++L K L +P+ +   S + S+++S                                W+LEDLN  VK DLSE  VT+G+HTE SF IAQG + E   +E IF    + TPP E RE+++ A+ ++ N FGGHF+ SET+ LLK+E+++++T+FL +SDVALDNSRV AGL+H++  ++EDG +P ++VLMGNFLSH FG+  DDV TL EK  ELG  +  +F  L+++  FV+VPG NDPGPGNVLPRPPMP+ + K F++AVGSE VHLATNPC++R++TQEIVILR+DLMQKMIRHC+VKP+  E+  M  H VK+V DQ +L PLP SARPVLW H H LWLFP PHV+VLADK D YIC Y   LG+NPGSF TDFSF VYLPA+KRAQQSS+
Sbjct:   78 MFRSRYELLLAKTLRNPQFRPPASGMLSMAKSSPYYQLTGIESLAGSKDEKLVLGMLTQLEEGSWFLEDLNGSVKLDLSEASVTAGLHTECSFAIAQGHLIETPNQESIFHVSAMGTPPLEKREESLNAMSKNPNLFGGHFEASETAQLLKLEKEAVDTMFLLLSDVALDNSRVMAGLKHMFTGYIEDGALPKLVVLMGNFLSHPFGQHVDDVMTLTEKFTELGTAIAADFSPLLEECVFVVVPGMNDPGPGNVLPRPPMPKTVMKGFIDAVGSERVHLATNPCRLRYMTQEIVILRDDLMQKMIRHCSVKPEFGESGSMSEHFVKSVVDQSHLCPLPNSARPVLWRHAHALWLFPVPHVVVLADKTDGYICKYGGTLGLNPGSFATDFSFQVYLPAQKRAQQSSV 483          
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A7S3EJ80 (DNA polymerase epsilon subunit n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ80_9RHOD)

HSP 1 Score: 254 bits (650), Expect = 1.220e-76
Identity = 150/401 (37.41%), Postives = 227/401 (56.61%), Query Frame = 0
Query:    1 MFRSRYDVMLNKPLEDPKL-----------KLLMSELQSV----SRSRI-----------WYLEDL--NVKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSS 373
            MFR R++++L + L D +            K+ ++E++S+     R  +           W+LEDL  +++  +     T G+HT+ S V+AQG+V        +F    + +P  E R D++ A+ R  + FG   + ++   L + E +  E + LF++DV LD  +V  G + + + F E  + P+VIVLMG+F S +       V+ L    G LG ++ D +KE+ ++T FVIVPGPNDPG   VLPR  +     + F + V  +NVHL ++PC++R+ TQEIV+ REDL+QKM+RH A +  LT       HLVK++ DQ +L PLPL++RPVLW HDH LWLFPTP V+VLA     ++ +Y      NP  F  + +F VYLP+ K  Q SS
Sbjct:  131 MFRKRFELLLQRTLRDERFHLPETHDFVDTKVRLTEIESLHTQSGRKTVLGFLTQLEEGTWFLEDLRSSIQISIKNAQFTPGIHTDGSIVLAQGEVVGS-----LFVVDTLGSPSAEKRLDSLAAISR-CDLFGPALEDADRKLLAEKETEDGEAMILFLADVWLDTKQVLGGFKRLLQGFQESKIAPAVIVLMGDFSSPQLSATEQAVN-LQSNFGALGNIIAD-YKEISEQTEFVIVPGPNDPGCMGVLPRESLAPFFVEEFRKYV--KNVHLMSSPCRLRYYTQEIVVFREDLLQKMMRHSATR--LTSEEDHTEHLVKSIVDQAHLCPLPLTSRPVLWEHDHALWLFPTPDVLVLACNQSPFVWSYNNCQAANPSRFGENCTFTVYLPSSKIVQHSS 519          
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A1Y1YLM3 (DNA polymerase epsilon subunit B n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YLM3_9FUNG)

HSP 1 Score: 241 bits (615), Expect = 5.660e-72
Identity = 137/343 (39.94%), Postives = 195/343 (56.85%), Query Frame = 0
Query:   35 WYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSF-KTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL+  V+ D  E   T+G  TE  FV+  G  TE    + IFK + I  PP E RE T    G+  N FG   +    S L +IEE   +  F+ +SDV LD+      LR +   +  + ++P   + +GNF+S  F     D +   E    LG ++  EFKE+   + F+ VPGP+DP  G+VLPRPP+P+  T +  + V   N    +NPC+I++ TQEIVI REDL+ KM R+C +K   +  + +  HL++T+ D+ +L PLPL  RP+ W++DH L L+P P+ ++LADK D Y   YE    +NPGSF  TDF F VY P +K  Q S L
Sbjct:  136 YYLEDLDSHVQLDFEEAHQTTGFFTEGCFVLVDGAYTE----DNIFKVKTIGLPPPERREITKSVFGQ-VNFFGAPEETLPMSQLKRIEESQKDVCFVILSDVWLDHPMTIPKLRTLLTGY-ANALIPLAFIFIGNFVSEPFLYTGKDSARYKEYFNALGLLI-GEFKEICQHSQFIFVPGPHDPWGGDVLPRPPIPENFTSQLRKHVP--NAIFTSNPCRIKYCTQEIVIFREDLINKMRRNCVIKSRKSSESDVKKHLIRTIIDEAHLCPLPLQVRPISWSYDHALRLYPIPNFLILADKFDPYSVNYEGCQCVNPGSFVSTDFQFQVYFPGKKLVQLSQL 469          
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A059AW13 (DNA polymerase epsilon subunit n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059AW13_EUCGR)

HSP 1 Score: 232 bits (592), Expect = 6.080e-68
Identity = 131/342 (38.30%), Postives = 192/342 (56.14%), Query Frame = 0
Query:   35 WYLEDL--NVKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL  +V+ +LS+  VT+G  TE + V+ +GQ+      E IFK      PP E R+ ++ AL       GG     ET  L ++E++++  +F+ +SDV LDN      L  +   F  + VVPS+ VLMGNF S          S++  + G+LG M++     L + + F+ +PGP D GP  VLPR  +P+ IT+ F   +   N   ++NPC+I+F TQEIV  R+DL+ KM R C + P   E +    HLV T++ Q +L PLPL  +PV+W +DH L L+PTPH IVL DK +    +Y      NPGSF  D +F+ Y P  +  + S+L
Sbjct:  195 FYLEDLTASVEINLSDAKVTTGFFTENTIVVVEGQMLL----EGIFKIFTCGFPPLEERDKSLKALAGLDFFGGGALTKEETLRLAELEKRAVNDMFIILSDVWLDNEEAMGKLEMVLDGFENEEVVPSLFVLMGNFCSRPCNLSFHSYSSIRAQFGKLGQMIESH-PRLKEHSRFLFIPGPEDAGPSTVLPRCALPRYITEEFQNRIP--NAIFSSNPCRIKFYTQEIVFFRQDLLYKMRRSCLMPPSTEETSDPFEHLVATITHQSHLCPLPLVVQPVIWNYDHSLHLYPTPHTIVLGDKSEQKAFSYTGITCFNPGSFSNDGTFVAYRPCTREVELSAL 529          
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A2U1M4B3 (DNA polymerase II subunit 2 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M4B3_ARTAN)

HSP 1 Score: 230 bits (586), Expect = 1.390e-67
Identity = 130/343 (37.90%), Postives = 194/343 (56.56%), Query Frame = 0
Query:   35 WYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESRE-DTIMALGRDANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL   V+ DLS   +T+G  +E + V+AQG++         F+ Q    PP E RE  T +  G D    GG     ET  L ++E +++  +F+ +SD+ LD+    A L  ++  +    VVPS+ VLMGNF S  F    +  S++    G+LG M+    + L + + F+ +PG +D GP  VLPR  +P+ IT+   + +   N   A+NPC+++F TQEIV  R+DL+ +M R C + P   E +    HLV T++ Q +L PLPLS +P++W +DH L L+PTPH IVLADK +    TY      NPGSF  D +F+VY P  +  + S+L
Sbjct:  144 FYLEDLTAAVEIDLSNAKITTGFFSENTIVLAQGEMLLNG----TFQVQTFGFPPLEDREKSTSLFTGLDYFG-GGTLQKEETKRLAEMESRAVNEMFVILSDIWLDHEETMAKLETVFDGYEGVDVVPSLFVLMGNFCSRPFNLSYNSFSSIRSDFGKLGKMIGSH-QRLKENSRFLFIPGLDDAGPSTVLPRCGLPKYITEELQKHIP--NAIFASNPCRVKFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHSLHLYPTPHTIVLADKSEQKAFTYTGITCFNPGSFSNDSTFVVYRPCNREFELSAL 478          
BLAST of Ggra1199.t1 vs. uniprot
Match: A0A7C9ENI0 (DNA polymerase II subunit 2 n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ENI0_OPUST)

HSP 1 Score: 226 bits (576), Expect = 9.090e-67
Identity = 124/343 (36.15%), Postives = 192/343 (55.98%), Query Frame = 0
Query:   35 WYLEDL--NVKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFG-GHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL  +V+ DLS   +T+G  TE + V+A+G+    K    IFK      PP E RE+++  +G   + FG G F   ET  L  +E +++  +F+ +SD+ LD       LR + + +    VVPS+ +LMGNF S          ++L  + G+LG M+  EF  L + + F+ +P P+D GP +VLPR  +P+ +T+   + +   N    +NPC+I+F +QEI + R DL+ +M R C + P   E +    HLV T+  Q +L PLPL+ +P+ W HDH L L+PTPH I+L D+ +     Y      NPGSF TD +F+ Y P  +  + S++
Sbjct:   86 YYLEDLTASVEVDLSSAKITTGFFTENTIVVAEGE----KLPNGIFKVNTCGFPPIEDREESLSFVGG-LDFFGCGTFTNEETKRLADMERKAVNDMFVILSDIWLDEEETMVKLRQVLEGYESVEVVPSLFILMGNFCSSPCNLSFHSFASLRSQFGKLGKMIA-EFPRLKEHSRFLFIPSPDDAGPSSVLPRCALPKYLTEELQKEIP--NALFMSNPCRIKFYSQEIAVFRRDLLYRMRRSCLIPPSTAETSDPFAHLVATIIHQSHLCPLPLTVQPISWNHDHCLHLYPTPHTIILGDRSEQKSFNYAGVTCFNPGSFSTDHTFVAYRPCTREVELSAV 420          
BLAST of Ggra1199.t1 vs. uniprot
Match: DNA polymerase epsilon subunit B n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9BBCA (DNA polymerase epsilon subunit B n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9BBCA)

HSP 1 Score: 227 bits (579), Expect = 4.570e-66
Identity = 128/343 (37.32%), Postives = 193/343 (56.27%), Query Frame = 0
Query:   35 WYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFG-GHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL   V+ +L+   +T G   E + V+AQG++      + IF+ Q    PP E RE +  +L    + FG G     +T  L ++E  +    F+ +SDV LDN    A L  +   +    VVPS+ VLMGNF S  F    +   ++    G+LG M+ +  + L++ + F+ +PGP+D GP  VLPR  +P+ IT+  ++ +   N    +NPC+I+F TQEIV  R+DL+ +M R C + P   E +    HLV T++ Q +L PLPLS +P++W +DH L L+PTPH IVLAD+ +    TY      NPGSF  D +F+VY P  +  + S+L
Sbjct:  189 FYLEDLTAAVEINLANAKITGGYFLENTIVLAQGEMLL----DGIFQVQTFGFPPLEDREKSA-SLFTGLDYFGSGTLGKEDTEKLARMESAATNETFVILSDVWLDNEETMAKLEIMLDAYEAVPVVPSLFVLMGNFCSQPFNLAYNSFPSIRSNFGKLGQMIGNH-QRLMENSRFLFIPGPDDAGPSTVLPRCALPKYITEELLKHIP--NAIFTSNPCRIKFFTQEIVFFRQDLLYRMRRSCLIPPSTEETSEPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPTPHTIVLADRSEQKATTYMGTTCFNPGSFSIDNTFVVYRPCNQEVELSAL 523          
BLAST of Ggra1199.t1 vs. uniprot
Match: DNA polymerase epsilon subunit B n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1269 (DNA polymerase epsilon subunit B n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1269)

HSP 1 Score: 226 bits (577), Expect = 9.000e-66
Identity = 126/343 (36.73%), Postives = 191/343 (55.69%), Query Frame = 0
Query:   35 WYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFG-GHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL+  V+ DLS+  +T+G  TE S V+A+G++        IF+      PP E RE T+  L    + FG G F   E   L  +E +++   F+ +SD+ +D+  V   L  +   F    +VPS+ V MGNF SH         S L ++ G+LG M+  +   L + + F+ +PGP+D GP  VLPR  +P  +T+   E +   N   ++NPC+++F TQEIV  R+DL+ +M R C + P   E      HLV T++ Q +L PLPL  +P++W +DH L L+PTPH +VL DK +  +C +      NPGSF TD +F+ Y P+    + S+L
Sbjct:  193 FYLEDLSACVEIDLSKAKITTGFFTENSIVLAEGELQVNG----IFQVITCGFPPLEEREKTLK-LHAGFDFFGSGMFTKEEMLKLADLERKAVSDTFVVLSDIWVDDEEVLGKLEIVLSGFESVEIVPSLFVFMGNFCSHPCNLSFGSYSKLRQQFGKLGKMI-GKHPRLKEHSRFLFIPGPDDAGPSTVLPRCSLPSYLTEELREIIP--NAIFSSNPCRVKFYTQEIVFFRQDLLHRMRRSCLIPPSTEETEDPFQHLVYTITHQSHLCPLPLMVQPIIWNYDHALRLYPTPHTMVLGDKSEQKVCKFGGTTCFNPGSFATDSTFVAYRPSTHEVELSAL 527          
BLAST of Ggra1199.t1 vs. uniprot
Match: M1D2B5 (DNA polymerase epsilon subunit n=13 Tax=Solanaceae TaxID=4070 RepID=M1D2B5_SOLTU)

HSP 1 Score: 226 bits (577), Expect = 9.420e-66
Identity = 126/343 (36.73%), Postives = 193/343 (56.27%), Query Frame = 0
Query:   35 WYLEDLN--VKADLSETFVTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGRDANPFGGHF-DMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIWKPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFKELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATNPCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQKYLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNPGSFKTDFSFLVYLPAEKRAQQSSL 374
            +YLEDL   V+ +LS   +T+G   E + V+A+G++      + +F+ +    PP E RE + MA     + FGG      ET  L ++E+ ++  +F+ +SDV LDN      L  I   +    VVPS+ V MGNF S  F      +S+L  + G+LG M+    + L + + F+ +PGP+D GP   LPR P+P+ +T+ F + V   N   ++NPC+I+F TQ+IV+ R D++ +M R C + P   E +    HLV T+  Q +L PLPL+ +P++W +DHGL L+PTPH IVL DK +     Y      NPGSF  D +F+ Y P  +  + S+L
Sbjct:  195 FYLEDLTAAVEVNLSSAKITTGFFVENTIVLAEGEMQL----DGVFQVRTCGFPPLEDREKS-MAFFSGLDFFGGGILTKEETLRLAELEKNAVNDMFVILSDVWLDNEETLGNLETILNGYENVEVVPSLFVFMGNFCSQPFNLSFKSISSLRVQFGKLGQMIASH-QRLKEHSRFLFIPGPDDVGPSTALPRCPLPKYLTEEFQKYVP--NAIFSSNPCRIKFYTQDIVLFRHDMLYRMRRSCLIPPSTEETSDPFEHLVATIIHQSHLCPLPLTVQPIIWNYDHGLHLYPTPHTIVLGDKSEQKAFRYTGVTCFNPGSFSNDGTFVAYRPCNQEVELSAL 529          
The following BLAST results are available for this feature:
BLAST of Ggra1199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IME24.210e-20471.43DNA polymerase II subunit 2 n=1 Tax=Gracilariopsis... [more]
R7QAS82.140e-15555.42DNA polymerase II subunit 2 n=1 Tax=Chondrus crisp... [more]
A0A7S3EJ801.220e-7637.41DNA polymerase epsilon subunit n=1 Tax=Rhodosorus ... [more]
A0A1Y1YLM35.660e-7239.94DNA polymerase epsilon subunit B n=1 Tax=Basidiobo... [more]
A0A059AW136.080e-6838.30DNA polymerase epsilon subunit n=6 Tax=Myrtoideae ... [more]
A0A2U1M4B31.390e-6737.90DNA polymerase II subunit 2 n=1 Tax=Artemisia annu... [more]
A0A7C9ENI09.090e-6736.15DNA polymerase II subunit 2 n=1 Tax=Opuntia strept... [more]
DNA polymerase epsilon subunit B n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9BBCA4.570e-6637.32DNA polymerase epsilon subunit B n=1 Tax=Erigeron ... [more]
DNA polymerase epsilon subunit B n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C12699.000e-6636.73DNA polymerase epsilon subunit B n=1 Tax=Tarenaya ... [more]
M1D2B59.420e-6636.73DNA polymerase epsilon subunit n=13 Tax=Solanaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.50coord: 161..358
e-value: 3.4E-7
score: 31.3
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 129..338
e-value: 1.5E-38
score: 132.3
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 33..373

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:66140..67365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1199.t1Ggra1199.t1Gracilaria gracilis GNS1m malemRNAtig00000168_pilon 66140..67365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1199.t1 ID=Ggra1199.t1|Name=Ggra1199.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=379bp
MFRSRYDVMLNKPLEDPKLKLLMSELQSVSRSRIWYLEDLNVKADLSETF
VTSGMHTEASFVIAQGQVTERKGEEPIFKGQEIETPPCESREDTIMALGR
DANPFGGHFDMSETSDLLKIEEQSLETVFLFVSDVALDNSRVFAGLRHIW
KPFLEDGVVPSVIVLMGNFLSHRFGEKPDDVSTLCEKLGELGAMVKDEFK
ELIDKTTFVIVPGPNDPGPGNVLPRPPMPQMITKRFVEAVGSENVHLATN
PCQIRFITQEIVILREDLMQKMIRHCAVKPDLTEAALMHTHLVKTVSDQK
YLTPLPLSARPVLWAHDHGLWLFPTPHVIVLADKVDSYICTYERNLGMNP
GSFKTDFSFLVYLPAEKRAQQSSLTVKT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR016266POLE2