Ggra1197.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1197.t1
Unique NameGgra1197.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
[Close]
BLAST of Ggra1197.t1 vs. uniprot
Match: A0A2V3IL61 (Charged multivesicular body protein 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL61_9FLOR)

HSP 1 Score: 247 bits (630), Expect = 7.030e-77
Identity = 146/244 (59.84%), Postives = 165/244 (67.62%), Query Frame = 0 
Query:    5 LWDAMIGFFEDAVVSSRSRPGKLVVTP--------------------------KGDI---------------------------------GSKKSEAPGLDDPIVPVAALKAAAARLSSYSEGPMASTEIHTVDSLASAVTEQNTRDAEAIISYLVSKNEAVPLFTEPHPEHTDPVLSVKFGKRKVNPSDKGVLRTKAALEDMENQSSNLEMAIAKEMETATKAAKSGNKAEALTRLEKKKVLE 189
            LWDA++GFFEDA+VSS SRPGKLVVTP                          KGDI                                 G+KK+E+P LDDPIVPVAALKAAAAR +S+SEGPMASTEIHTV +LA+AVT +NTRDAEA+ISYLVSKNEAVPLFTEP PEH +PVL VKFGK KVNPSD+GVLRTKAA E ME QS +LE A+A E E AT AAK+G K+EALTRL +KKVLE
Sbjct:   41 LWDAIVGFFEDAIVSSCSRPGKLVVTPRELLKQLKHNGREPSSGLRVIRELFQKGDIVSADTLRPPSKDSSNRAGYTLSALKQTLGSYIWGAKKTESPSLDDPIVPVAALKAAAARFASFSEGPMASTEIHTVKTLAAAVTGRNTRDAEAVISYLVSKNEAVPLFTEPSPEHPEPVLGVKFGKHKVNPSDQGVLRTKAAFEHMEQQSMHLEKAVAAEKEAATIAAKAGQKSEALTRLRRKKVLE 284
The following BLAST results are available for this feature:
BLAST of Ggra1197.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IL617.030e-7759.84Charged multivesicular body protein 7 n=1 Tax=Grac... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:49945..50782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1197.t1Ggra1197.t1Gracilaria gracilis GNS1m malemRNAtig00000168_pilon 49945..50782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1197.t1 ID=Ggra1197.t1|Name=Ggra1197.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MFQGLWDAMIGFFEDAVVSSRSRPGKLVVTPKGDIGSKKSEAPGLDDPIV
PVAALKAAAARLSSYSEGPMASTEIHTVDSLASAVTEQNTRDAEAIISYL
VSKNEAVPLFTEPHPEHTDPVLSVKFGKRKVNPSDKGVLRTKAALEDMEN
QSSNLEMAIAKEMETATKAAKSGNKAEALTRLEKKKVLEKIGLPKDRKWM
LPASMGRENTRKWK*
back to top