Ggra1193.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1193.t1
Unique NameGgra1193.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A2V3IZB0 (Protein dispatched-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZB0_9FLOR)

HSP 1 Score: 244 bits (623), Expect = 4.190e-71
Identity = 129/242 (53.31%), Postives = 166/242 (68.60%), Query Frame = 0
Query:    1 MNDTEIEDCEEKQFNCASPLSLLNSPFLSGKWQGDCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSR 242
             ND    DCE    +CA P S+LNSP L GKW+ +   GR  + ++ S E FS  L+ L   +  G  VVNP+Y++L+G + L   N TW++ ++L +GGPF+N+ S+++R  EQ + Y  WGL+    VE LS   K +V    SKL NA+FS   LRDLSF VVAI+LVFL+IW+HTGS FLA AAMGQVF SFP+A ++YR V +Q YFAALQI S+FLLL IGADD F+FTDAWKQSR
Sbjct:  152 FNDN-FTDCEGNTPDCAPPESVLNSPHLYGKWENNRFCGRKKSNERPSREDFSKFLSSLFVKNQNGTQVVNPEYSDLIGKDFLAKKNETWIIRSVLPVGGPFQNYKSVDDRTTEQADEYTAWGLEYAKNVEMLSND-KRDVRFTSSKLNNASFSGTALRDLSFVVVAIVLVFLVIWYHTGSGFLALAAMGQVFMSFPVAYVLYRFVCRQYYFAALQILSIFLLLGIGADDVFVFTDAWKQSR 391          
BLAST of Ggra1193.t1 vs. uniprot
Match: R7QR56 (SSD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR56_CHOCR)

HSP 1 Score: 181 bits (460), Expect = 1.340e-48
Identity = 97/245 (39.59%), Postives = 141/245 (57.55%), Query Frame = 0
Query:    1 MNDTEIEDCEEKQFNCASPLSLLNSPFLSGKWQGDCHG----GRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQS 241
            +ND    DC+     C  P S+L S  L G+W G+       GR    QQ S+  F   ++ L++ D  G + V P ++  +G +       +W+  +   IG PF  F++ ++R  EQ+  Y  W     +  E  +     +V L  S L N +F+SI +RDLSF + AI++VF +IWFHT S FLA++AM Q+F +FP +   YR+VF+Q YFAALQI  +FL+L IGADD F+FTDAW+QS
Sbjct:  162 LNDPSARDCDGNPLKCVLPKSVLMSEHLYGRWTGEGEERRLCGRKEGNQQVSDVAFDDFIDSLVERDQDGNLFVKPLFSSYIGTDFTPDNRESWVAHSYFPIGVPFEGFATEDDRSAEQDKAYDTWASAAAELAEGFTTED-VDVFLASSALVNGSFNSIIVRDLSFSIAAIVMVFFVIWFHTSSAFLASSAMLQIFLAFPFSYFFYRVVFRQNYFAALQILVIFLILGIGADDVFVFTDAWRQS 405          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A7S0ZFC8 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFC8_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 1.550e-24
Identity = 76/243 (31.28%), Postives = 124/243 (51.03%), Query Frame = 0
Query:    3 DTEIEDCEEKQFNCASPLSLLNS----PFLSGKWQGDCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQS 241
            D    DC  +  NCA P SL+ +      L  + Q  C  G  N+  + S+      +  LL T+S     VNP+Y  L+G +    ++    + +   +G P   + +  ++  EQ + + ++ +  +D   + S   +TEV +  S   N  FS +  +  ++ + +++ VF +IWFHT S +LA   M Q+  SFP+   IYR + Q  YF++  I S+FL+L IGADD F+FTD W QS
Sbjct:  194 DQSFVDCSNQVPNCALPESLITNFNLYGILDSEQQYVC--GLSNSTGRVSDAAIDAAVESLL-TESGN---VNPEYAFLLGYDFSADSSQMQYLRSSFLMGTPLDGYQNANDQENEQRSTFEKFVIGVVDWALSQSTS-ETEVMIFNSVYLNYVFSDLTSKAFAWAIGSVIFVFAVIWFHTTSGYLAVMVMIQILLSFPVTYFIYRFICQITYFSSFHILSVFLILGIGADDCFVFTDTWHQS 429          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A5J4Z305 (Protein dispatched-like 3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z305_PORPP)

HSP 1 Score: 98.2 bits (243), Expect = 1.250e-19
Identity = 65/240 (27.08%), Postives = 114/240 (47.50%), Query Frame = 0
Query:    3 DTEIEDCEEKQFNCASPLSLLNSPFLSGKWQGDCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSR 242
            D    DC+     C+ P ++  S  L G +  D     F    QTS  P    +  L+ +       VN +Y   +G        ++  + ++  +G P   + + E ++++Q + +  W  D +   E+ S   + ++ +      N  F  +  +   + V +I+ V   +WFHT S +LA   M Q+  +FPL   IY  +F+  YF+++ + S+FL+L IGADD F+F DA+ QSR
Sbjct:  201 DEAFLDCQGVVPTCSFPETISRSQDLYGLYT-DTDPEEFCAITQTSPVPPRANVTALVDSLILPNGQVNSEYAYYLGTGFSSSNLTSEYLRSVFPMGAPLEGYDNQETQKDKQRDSFEDWIQDVVTWAESKSTD-EVQILVYNQSYLNYLFGEMANKAFFWAVGSIVAVLFFVWFHTASLYLAIMTMLQIVLAFPLTYFIYYFIFRVSYFSSMHMLSIFLILGIGADDVFVFIDAFHQSR 438          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A0L0D5K7 (Resistance-nodulation-cell division superfamily protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D5K7_THETB)

HSP 1 Score: 84.0 bits (206), Expect = 9.370e-15
Identity = 48/157 (30.57%), Postives = 82/157 (52.23%), Query Frame = 0
Query:   95 ILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSRWTSELRQEL 251
            ++  G P   F + ++  + Q   Y ++ +D ++        P  EV    + L +  F  I   D  F V+AI+ V + +WFH+ S FLA   M  +  SFP+A  +YR++  +++F  L    ++++L +GADD F+F DAWKQS +   +   L
Sbjct:  253 VISFGYPLAGFRNADDNVDAQAKAYSKF-IDALEPFLDSLGSPNLEVYYTNTLLLSKQFDKILATDAIFVVMAIVFVLIYMWFHSRSLFLAGLGMLHIVISFPMAYFVYRVILGEEFFPFLLFLGIYVVLGVGADDVFIFLDAWKQSAFIPGVNASL 408          
BLAST of Ggra1193.t1 vs. uniprot
Match: L1JAC5 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JAC5_GUITC)

HSP 1 Score: 82.0 bits (201), Expect = 4.240e-14
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 0
Query:   95 ILRIGGPFRNFSSIENRR-EEQENHYIQWGLDR----MDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSR 242
            + R GGP + +  ++ +  +EQ++   +W +D     +D+  +        V    S L       I L D    +++ILLVF  IW+  GS FLA   M ++  S P A    R +FQ KYF  L +  +F++  IGADD F+F DA+ QS+
Sbjct:  319 LYRFGGPLKGYKLVDGKEGDEQDSELKKWIIDNHLKSIDKATSSGYSKFVNVFYFMSALIFDVLIRIILYDAMNAIISILLVFFYIWYMVGSGFLAVIGMVEILLSLPTAWFFVRCIFQIKYFGGLNMLCIFIVCAIGADDIFVFMDAYNQSK 471          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A7D9K6J1 (Dispatched homolog 3-like (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9K6J1_PARCT)

HSP 1 Score: 80.9 bits (198), Expect = 8.900e-14
Identity = 65/253 (25.69%), Postives = 116/253 (45.85%), Query Frame = 0
Query:    3 DTEIEDCEEKQFNCASPLSLLNSPFLSGKWQG---DCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTL---MGSK----LRNAAFSSIELR----DLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQS 241
            D  +         C  PLS+L   F  G ++    D +  +F    +      S+ ++  + T   GK       + ++  N+ +   +  LM      G P   ++S ++R ++Q         D MD+    +   K E T    +GS       NA F+   ++    D+   V + + +FL +WF TGS ++ +  +  V  SF +A ++YR+VF  +YF    + S+F++L IG+D+ F+F D+WKQS
Sbjct:  106 DYSVNSTNYTTSTCKKPLSILR--FFDGSYKNISADLYDPKFENIPKVLHAAQSVNVSRAILTFHLGK-------DAVINQNVAESEVTRTLMYT----GWPIEGYNSTDDRDDDQR--------DEMDKRIVDAFAEKLEDTFKDGVGSLDFVYNNNALFTDATIKQVILDMLLAVASFIFIFLFMWFQTGSIWITSWGIFSVISSFNIANLVYRVVFDYRYFGIFHVLSIFIILGIGSDNIFVFMDSWKQS 337          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A7D9HVR3 (Dispatched homolog 3-like n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HVR3_PARCT)

HSP 1 Score: 80.9 bits (198), Expect = 1.050e-13
Identity = 65/253 (25.69%), Postives = 116/253 (45.85%), Query Frame = 0
Query:    3 DTEIEDCEEKQFNCASPLSLLNSPFLSGKWQG---DCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTL---MGSK----LRNAAFSSIELR----DLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQS 241
            D  +         C  PLS+L   F  G ++    D +  +F    +      S+ ++  + T   GK       + ++  N+ +   +  LM      G P   ++S ++R ++Q         D MD+    +   K E T    +GS       NA F+   ++    D+   V + + +FL +WF TGS ++ +  +  V  SF +A ++YR+VF  +YF    + S+F++L IG+D+ F+F D+WKQS
Sbjct:  202 DYSVNSTNYTTSTCKKPLSILR--FFDGSYKNISADLYDPKFENIPKVLHAAQSVNVSRAILTFHLGK-------DAVINQNVAESEVTRTLMYT----GWPIEGYNSTDDRDDDQR--------DEMDKRIVDAFAEKLEDTFKDGVGSLDFVYNNNALFTDATIKQVILDMLLAVASFIFIFLFMWFQTGSIWITSWGIFSVISSFNIANLVYRVVFDYRYFGIFHVLSIFIILGIGSDNIFVFMDSWKQS 433          
BLAST of Ggra1193.t1 vs. uniprot
Match: A0A7S0HVB8 (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HVB8_9CRYP)

HSP 1 Score: 79.3 bits (194), Expect = 3.340e-13
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 0
Query:   95 ILRIGGPFRNFSSIENRREEQENHYIQ-WGLDR----MDQVEALSMPPKTEVTLMGSKLRNAAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSR 242
            + R GGP + ++ ++ +  E ++  ++ W +D     +D+  +       ++    S L       I + D    +++ILLVF  IW+  GS FLA   M ++  S P A    R +FQ KYF  L +  +F++  IGADD F+F DA+ QS+
Sbjct:  326 LYRWGGPLKGYTLVDGKEGEDQDQVLRKWIIDNHLKDIDKTTSSGYSNYVDIFYFMSALIFDVLIRILIFDAMNAIISILLVFFYIWYMVGSAFLAVIGMVEILLSLPTAWFFVRCIFQIKYFGGLNMLCIFIVCAIGADDIFVFMDAYNQSK 478          
BLAST of Ggra1193.t1 vs. uniprot
Match: protein dispatched homolog 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069C1B0 (protein dispatched homolog 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069C1B0)

HSP 1 Score: 78.6 bits (192), Expect = 6.410e-13
Identity = 62/236 (26.27%), Postives = 105/236 (44.49%), Query Frame = 0
Query:   12 KQFNCASPLSLLNSPFLSGKWQGDCHGGRFNTEQQTSEEPFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQ-GTNSTWLMLNILRIGGPFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRNAAFSSIELR-----DLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLACIIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQS 241
            K   C +PLS+++  F  G +  + H   ++   Q      S  L    QT +  + ++N     L  D +++  T  +    +++  G P   +S   ++  EQE    +  +D       L       V  M     N A  S  +R     D+   + +   +F+  WFHTGS ++ A  +  +  SF +  +IYR VF  +YF    + S+F++L IG DD F+F D W+QS
Sbjct:  216 KNMTCKTPLSIIS--FFDGSYS-NIHSDLYDPTFQN----ISFVLYTA-QTINISRAILN---FHLGKDAVIEKNTARSQYTRSLMYTGWPLEGYSRTNDKEREQEEKLNEIIVDHFS--STLKKKHDKGVGRMNFYYNNRALRSNAIRNQIIFDMMLAIASFAFIFIFSWFHTGSLWITAWGVFSIVSSFNITILIYRFVFDYRYFGIFHVLSIFIILGIGFDDVFIFMDTWRQS 438          
The following BLAST results are available for this feature:
BLAST of Ggra1193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZB04.190e-7153.31Protein dispatched-like n=1 Tax=Gracilariopsis cho... [more]
R7QR561.340e-4839.59SSD domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S0ZFC81.550e-2431.28Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z3051.250e-1927.08Protein dispatched-like 3 n=1 Tax=Porphyridium pur... [more]
A0A0L0D5K79.370e-1530.57Resistance-nodulation-cell division superfamily pr... [more]
L1JAC54.240e-1432.68Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7D9K6J18.900e-1425.69Dispatched homolog 3-like (Fragment) n=2 Tax=Param... [more]
A0A7D9HVR31.050e-1325.69Dispatched homolog 3-like n=2 Tax=Paramuricea clav... [more]
A0A7S0HVB83.340e-1330.72Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
protein dispatched homolog 3-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069C1B06.410e-1326.27protein dispatched homolog 3-like n=1 Tax=Dendrone... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45951:SF7STEROL-SENSING DOMAINcoord: 95..245
NoneNo IPR availablePANTHERPTHR45951PROTEIN DISPATCHED-RELATEDcoord: 95..245
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 183..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 207..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..251
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 178..182
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 122..241
NoneNo IPR availableTMHMMTMhelixcoord: 212..234
NoneNo IPR availableTMHMMTMhelixcoord: 161..180
NoneNo IPR availableTMHMMTMhelixcoord: 185..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000168_piloncontigtig00000168_pilon:14970..15725 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1193.t1Ggra1193.t1Gracilaria gracilis GNS1m malemRNAtig00000168_pilon 14970..15725 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1193.t1 ID=Ggra1193.t1|Name=Ggra1193.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MNDTEIEDCEEKQFNCASPLSLLNSPFLSGKWQGDCHGGRFNTEQQTSEE
PFSLCLNPLLQTDSYGKIVVNPKYNELVGDNILQGTNSTWLMLNILRIGG
PFRNFSSIENRREEQENHYIQWGLDRMDQVEALSMPPKTEVTLMGSKLRN
AAFSSIELRDLSFCVVAILLVFLIIWFHTGSQFLAAAAMGQVFFSFPLAC
IIYRLVFQQKYFAALQIFSLFLLLCIGADDEFLFTDAWKQSRWTSELRQE
L*
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