Ggra1139.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1139.t1
Unique NameGgra1139.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length259
Homology
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BLAST of Ggra1139.t1 vs. uniprot
Match: A0A2V3IN11 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN11_9FLOR)

HSP 1 Score: 105 bits (262), Expect = 1.990e-22
Identity = 74/241 (30.71%), Postives = 124/241 (51.45%), Query Frame = 0 
Query:   20 RTAEFSITNLRVQVMINSLSRHVLHLAPLRPDLQFEHSVQVFKSIVGDALNTLGAEFEGSLTLFREGSDSGILASPYGKIYILYSQLLPREVSQDIMASALTEQLRALPLERNSSGAPWVHDGENGFSRNGSAVIATIGLNRIAHGTLLIMVVVLWLLRLVMSKWFGVGFEEAGYLVSQMVLEDYVEVRSSQESNAPK--WHAAELR-LTRFALGHTGHFGYTRTDEEQVVVSSFEGCDHV 257
            R  E  +T + +Q ++N++    L L+P+RPDL        F +++   LN  G   +G    FR+ +  G+ A     I +L+SQ +   ++Q  +A  L   LRALP+  NS+G PWV      + +     IA IG+NR+AH  LLI+V+VL ++ L++ + F  GF+   +   Q    D + +  +  +      W ++  + + +F+ G TGH G+  +   Q+ V SF GCD V
Sbjct:  233 RNTEHKVTRVELQTVLNTVDGDSLQLSPVRPDLSLSKGKAFFDAVIDGVLNEWGLPHDG----FRK-TAKGVDA-----ISMLHSQEI--SLTQSEIADYLVAYLRALPMSLNSTGPPWVFSSGQ-YKQRADIRIAVIGINRVAHSILLIVVLVLAVIHLIVQRIFP-GFDAVAFAAIQSFTGDSIGIGPTATAGTTNNVWKSSSAQHVQKFSDGKTGHIGFQPSFAGQIPVHSFTGCDIV 459
The following BLAST results are available for this feature:
BLAST of Ggra1139.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IN111.990e-2230.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..161
NoneNo IPR availableTMHMMTMhelixcoord: 157..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000140_piloncontigtig00000140_pilon:62461..63237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1139.t1Ggra1139.t1Gracilaria gracilis GNS1m malemRNAtig00000140_pilon 62461..63237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1139.t1 ID=Ggra1139.t1|Name=Ggra1139.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=259bp
MTVAFVFDADSNQHMLRIERTAEFSITNLRVQVMINSLSRHVLHLAPLRP
DLQFEHSVQVFKSIVGDALNTLGAEFEGSLTLFREGSDSGILASPYGKIY
ILYSQLLPREVSQDIMASALTEQLRALPLERNSSGAPWVHDGENGFSRNG
SAVIATIGLNRIAHGTLLIMVVVLWLLRLVMSKWFGVGFEEAGYLVSQMV
LEDYVEVRSSQESNAPKWHAAELRLTRFALGHTGHFGYTRTDEEQVVVSS
FEGCDHVI*
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