Ggra1122.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1122.t1
Unique NameGgra1122.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length358
Homology
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BLAST of Ggra1122.t1 vs. uniprot
Match: A0A2V3IIA9 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA9_9FLOR)

HSP 1 Score: 172 bits (435), Expect = 2.850e-48
Identity = 88/191 (46.07%), Postives = 131/191 (68.59%), Query Frame = 0 
Query:   13 PSWRFTEELVELTSSNNHQWIQNFRDTVIEHEHEAILQRNYTPTTNEEIKAVFSVRRMITKTITPEVVNLIADPEIFSKPPGNIVEQIITILTTKNQTDVFSLLNEVLNVKRSGSISEYIAEHLKIRGKQIVANTLGIQRETYTVNFILQGLTADQRFGAQATNMLVNARPTTINECPLRLEEFERLIRRQ 203
            PS RFTEELVELT+ N  QW QN  D + EHE++ +L   + PTT+E+ KA  S+R +ITK+IT +V +++ADP +F+  P  IV  I  ++ +++  + FSL  E ++++R+G+I EYIA HL IR KQI ANT G+  E  T+N+ILQGL  D RF  +A  ++++  PTTI+E   RLE++E ++ +Q
Sbjct:    6 PSLRFTEELVELTAQNYIQWRQNLDDILTEHEYQQLLSITFQPTTSEDHKATASLRGIITKSITQDVGDMLADPTLFNHSPAAIVHGIQRVIDSQSAKNYFSLTTEAMSLRRTGTILEYIASHLAIRRKQISANTPGVSDERVTINYILQGLVNDHRFSQRAVTLMLDTPPTTISETQHRLEQYESILNQQ 196
[Close]
BLAST of Ggra1122.t1 vs. uniprot
Match: A0A2V3IQ93 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ93_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 1.300e-31
Identity = 67/146 (45.89%), Postives = 99/146 (67.81%), Query Frame = 0 
Query:   13 PSWRFTEELVELTSSNNHQWIQNFRDTVIEHEHEAILQRNYTPTTNEEIKAVFSVRRMITKTITPEVVNLIADPEIFSKPPGNIVEQIITILTTKNQTDVFSLLNEVLNVKRSGSISEYIAEHLKIRGKQIVANTLGIQRETYTVN 158
            PSWRFTEELVELT+ N     QN  + + E E++ +L   + PTT+++ KA  S+RR+ITK+IT +V +++ADP +F++ P  IV  I  ++ +++  + FSL  E + ++R+G+ISEYIA HL I  KQI ANT GI  E  T+N
Sbjct:    6 PSWRFTEELVELTAQNYIHSRQNLDNILTEQEYQQLLSITFQPTTSKDHKATTSLRRIITKSITQDVSDMLADPTLFNQSPAAIVHGIQRVIDSQSSKNYFSLTTEAMKLRRTGTISEYIASHLAICRKQISANTPGIFDERVTIN 151
The following BLAST results are available for this feature:
BLAST of Ggra1122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIA92.850e-4846.07Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IQ931.300e-3145.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000945_piloncontigtig00000945_pilon:179196..180269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1122.t1Ggra1122.t1Gracilaria gracilis GNS1m malemRNAtig00000945_pilon 179196..180269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1122.t1 ID=Ggra1122.t1|Name=Ggra1122.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=358bp
MAQSSSNINPSQPSWRFTEELVELTSSNNHQWIQNFRDTVIEHEHEAILQ
RNYTPTTNEEIKAVFSVRRMITKTITPEVVNLIADPEIFSKPPGNIVEQI
ITILTTKNQTDVFSLLNEVLNVKRSGSISEYIAEHLKIRGKQIVANTLGI
QRETYTVNFILQGLTADQRFGAQATNMLVNARPTTINECPLRLEEFERLI
RRQNDYISPIPSASGRGRGAYRGRGRGRGHESNRYQQKNSDNSQVKDMLT
QIVSKINKLQADTKAKKPRGGRARANYTNAEHHLSDETLHTLFVAASDQN
HKQRKYIIDSGAHPSIVNHFLRNTTDLSFPIISATATSAPLKSTKKGTRL
IQNKAGH*
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