Ggra1120.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1120.t1
Unique NameGgra1120.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length136
Homology
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A2V3ISM8 (Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISM8_9FLOR)

HSP 1 Score: 125 bits (313), Expect = 5.700e-31
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKNS 135
            +LDT+ P CR+A+ A   +QV+   D MDSTAS + VP F+  LEGDLS +  GVV ESL+S V+ EV+ AVQ A +V ++LG+  + VSL  LS     YYVI  SE+SANL RYD VRYG     A+NS
Sbjct:  249 SLDTIGPLCRSAEDAALLMQVMAGADGMDSTASKSPVPTFSAYLEGDLSGLRFGVVEESLASEVDTEVSNAVQNATDVLKSLGADVQTVSLPFLSHVTAAYYVIAYSEASANLARYDGVRYGTRAVDAQNS 379          
BLAST of Ggra1120.t1 vs. uniprot
Match: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Virgibacillus sp. MSJ-26 TaxID=2841522 RepID=UPI001C0F63C7 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Virgibacillus sp. MSJ-26 TaxID=2841522 RepID=UPI001C0F63C7)

HSP 1 Score: 106 bits (264), Expect = 2.990e-24
Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD V P  R  +     ++VI   DE D+T++N  VP +T+ L GD+ ++  GV  E LS  VN EV EAVQ AL+++  LG+  E VSL     A   YY+I++SE+SANL RYD VRYG   ++AKN
Sbjct:  205 SLDQVGPITRTVEDNARVLEVIAGHDERDATSANLEVPTYTDALTGDVKNLKIGVPKEYLSEKVNPEVKEAVQKALSIYEKLGATWEEVSLPHSKYAEAAYYLISSSEASANLARYDGVRYGERSENAKN 334          
BLAST of Ggra1120.t1 vs. uniprot
Match: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Lentibacillus sp. Marseille-P4043 TaxID=2040293 RepID=UPI000D0B4E7C (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Lentibacillus sp. Marseille-P4043 TaxID=2040293 RepID=UPI000D0B4E7C)

HSP 1 Score: 105 bits (263), Expect = 4.210e-24
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  RN +     ++VI   D+MDST++N  VP FTE L GD+  +   V  E L  GV+ EV ++V  AL V+ +LG++ E VSL     A   YY+I +SE+SANL R+D VRYGV  ++AK+
Sbjct:  209 SLDQIGPITRNVEDNARVLEVISGQDKMDSTSANVDVPAFTESLTGDVKGLKIAVPKEYLGEGVSPEVKQSVMDALQVYESLGAEWEEVSLPHSRYAVAAYYIIASSEASANLARFDGVRYGVRSENAKD 338          
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A0J5GRU6 (Glutamyl-tRNA(Gln) amidotransferase subunit A n=10 Tax=Bacillales TaxID=1385 RepID=A0A0J5GRU6_9BACI)

HSP 1 Score: 104 bits (259), Expect = 1.480e-23
Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  R  +   + +Q I  +D MDST++NA VP F   L GD+  +  GV  E L+ GV+ EV ++V+ AL V   LG+K E VSL     A   YY++++SE+SANL R+D VRYG    +AKN
Sbjct:  209 SLDQIGPITRTVEDNAYLLQAISGIDPMDSTSANADVPDFLSSLTGDIKGLKIGVPKEYLAEGVSEEVRQSVKDALKVLEGLGAKWEEVSLPHSQYALATYYLLSSSEASANLARFDGVRYGYRTDNAKN 338          
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A265N6P9 (Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 Tax=Virgibacillus TaxID=84406 RepID=A0A265N6P9_9BACI)

HSP 1 Score: 103 bits (258), Expect = 2.070e-23
Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  RN +     ++VI   DEMDST++   +P +TE L GD++ +   V  E L+ GV  EV EAVQ AL V+ +LG+  E VSL     A   YY++++SE+SANL R+D VRYGV  ++A N
Sbjct:  207 SLDQIGPITRNVEDNARVLEVIAGHDEMDSTSAAVDIPSYTESLTGDVNGLKIAVPKEYLAEGVAPEVKEAVQNALKVYESLGATWEEVSLPHSKYAVATYYLLSSSEASANLARFDGVRYGVRSENADN 336          
BLAST of Ggra1120.t1 vs. uniprot
Match: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus sp. Castelsardo TaxID=1851204 RepID=UPI0008388321 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus sp. Castelsardo TaxID=1851204 RepID=UPI0008388321)

HSP 1 Score: 103 bits (257), Expect = 2.850e-23
Identity = 56/130 (43.08%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  R+ +     ++VI   D++D+T++N  VP +TE L GD+  +   V  E L+ GVN EV EAV  AL V+ +LG+  E VSL     A   YY+I++SE+SANL R+D VRYGV  ++A N
Sbjct:  207 SLDQIGPITRSVEDNARVMEVIAGHDKLDATSANLDVPKYTEALTGDVQGLKIAVPKEYLAEGVNPEVKEAVMNALKVYESLGATWEEVSLPHSKYALASYYIISSSEASANLARFDGVRYGVRTENADN 336          
BLAST of Ggra1120.t1 vs. uniprot
Match: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus halotolerans TaxID=2663380 RepID=UPI0013DA0E28 (Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus halotolerans TaxID=2663380 RepID=UPI0013DA0E28)

HSP 1 Score: 103 bits (257), Expect = 2.850e-23
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  RN +     ++VI   DEMDST+++  VP +TE L  D+  +   V  E LS GV +EV E+V  AL V+ +LG++ E VSL     A   YY++ +SE+SANL R+D VRYGV  ++A N
Sbjct:  207 SLDQIGPVTRNVEDNARVLEVISGHDEMDSTSADVEVPKYTEALTNDVKGLKIAVPKEYLSEGVASEVKESVMNALKVYESLGAEWEEVSLPHSKYAVASYYLLASSEASANLARFDGVRYGVRSENADN 336          
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A0K0G9M6 (Glutamyl-tRNA(Gln) amidotransferase subunit A n=5 Tax=Bacilli TaxID=91061 RepID=A0A0K0G9M6_9FIRM)

HSP 1 Score: 103 bits (256), Expect = 3.920e-23
Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  R+ +     ++VI   D+MD+T++N  VP +T+ L  D+  +   V  E L+ GVN EV EAV  ALNV+ +LG+  E VSL     A   YY++++SE+SANL R+D VRYGV  ++A N
Sbjct:  207 SLDQIGPITRSVEDNARVLEVIAGHDKMDATSANVDVPKYTDALTNDVKGLKIAVPKEYLAEGVNPEVKEAVMNALNVYESLGATWEEVSLPHSKYAVATYYILSSSEASANLARFDGVRYGVRTENADN 336          
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A3C1I2W5 (Glutamyl-tRNA(Gln) amidotransferase subunit A n=9 Tax=Bacillaceae TaxID=186817 RepID=A0A3C1I2W5_9BACI)

HSP 1 Score: 102 bits (255), Expect = 5.400e-23
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD + P  R  +     ++VI   D+MD+T++N  +P +TE L GD+  +   V  E L+ GVN EV EAV  AL V+ +LG+  E VSL     A   YY+I++SE+SANL R+D VRYGV  + A+N
Sbjct:  207 SLDQIGPLTRTVEDNARVLEVIAGHDKMDATSANIDIPTYTESLTGDVKGLKIAVPKEYLAEGVNPEVKEAVLEALRVYESLGATWEEVSLPHSKYAVAAYYLISSSEASANLARFDGVRYGVRSEKAEN 336          
BLAST of Ggra1120.t1 vs. uniprot
Match: A0A5C8NWR7 (Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Cerasibacillus terrae TaxID=2498845 RepID=A0A5C8NWR7_9BACI)

HSP 1 Score: 102 bits (253), Expect = 1.030e-22
Identity = 59/130 (45.38%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    5 ALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEGDLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSVAAPGYYVITNSESSANLERYDDVRYGVWEQHAKN 134
            +LD V P  R  +     ++VI   D+MD T++   VP FTE L GD+ D+   V  E LS  V+ EV EAV  AL V+ +LG+  E VSL     AA  YYVI++ E+SANL R+D VRYGV  + AK+
Sbjct:  207 SLDQVGPITRTVEDNARVLEVIAGQDKMDMTSAPLEVPSFTEGLTGDVKDLKIAVPKEYLSEAVDPEVKEAVMNALKVYESLGATWEEVSLPHSKYAAAAYYVISSGEASANLARFDGVRYGVRSEKAKD 336          
The following BLAST results are available for this feature:
BLAST of Ggra1120.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISM85.700e-3151.91Glutamyl-tRNA(Gln) amidotransferase subunit A, mit... [more]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Virgibacillus sp. MSJ-26 TaxID=2841522 RepID=UPI001C0F63C72.990e-2445.38Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Lentibacillus sp. Marseille-P4043 TaxID=2040293 RepID=UPI000D0B4E7C4.210e-2443.85Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A0J5GRU61.480e-2343.08Glutamyl-tRNA(Gln) amidotransferase subunit A n=10... [more]
A0A265N6P92.070e-2343.85Glutamyl-tRNA(Gln) amidotransferase subunit A n=2 ... [more]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus sp. Castelsardo TaxID=1851204 RepID=UPI00083883212.850e-2343.08Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA n=1 Tax=Oceanobacillus halotolerans TaxID=2663380 RepID=UPI0013DA0E282.850e-2343.08Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun... [more]
A0A0K0G9M63.920e-2342.31Glutamyl-tRNA(Gln) amidotransferase subunit A n=5 ... [more]
A0A3C1I2W55.400e-2343.08Glutamyl-tRNA(Gln) amidotransferase subunit A n=9 ... [more]
A0A5C8NWR71.030e-2245.38Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023631Amidase signature domainPFAMPF01425Amidasecoord: 5..123
e-value: 3.5E-8
score: 32.9
IPR036928Amidase signature (AS) superfamilyGENE3D3.90.1300.10Amidase signature (AS) domaincoord: 1..135
e-value: 6.6E-17
score: 63.7
IPR036928Amidase signature (AS) superfamilySUPERFAMILY75304Amidase signature (AS) enzymescoord: 5..131
IPR000120AmidasePANTHERPTHR11895TRANSAMIDASEcoord: 5..131
NoneNo IPR availablePANTHERPTHR11895:SF151GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT Acoord: 5..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000945_piloncontigtig00000945_pilon:138286..138809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1120.t1Ggra1120.t1Gracilaria gracilis GNS1m malemRNAtig00000945_pilon 138286..138809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1120.t1 ID=Ggra1120.t1|Name=Ggra1120.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=136bp
MCPVALDTVEPKCRNAQHATFKIQVIGAVDEMDSTASNASVPPFTELLEG
DLSDVPNGVVNESLSSGVNAEVAEAVQGALNVFRNLGSKAEVVSLRLLSV
AAPGYYVITNSESSANLERYDDVRYGVWEQHAKNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023631Amidase_dom
IPR036928AS_sf
IPR000120Amidase