Ggra1119.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1119.t1
Unique NameGgra1119.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length354
Homology
BLAST of Ggra1119.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 293 bits (751), Expect = 2.410e-94
Identity = 158/331 (47.73%), Postives = 219/331 (66.16%), Query Frame = 0
Query:    1 MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISIRSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQQVQCSDNAMYSYKYSENQGKTAGELNLTRLDAELGCVPDGGRNG--CVFVKQVANTSYCSEPFYLDQIKSLPEKMLFLTTELHFKPPSDLKIFARRALRTFLENIGSKAVLRRAIYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKRMFFDVSNPMDWGRQIVGTDEVAPSENLLL 329
            MVLI LK+PFVSVI T+L+TL+E+AL+S L  LN  + CK+LQ GRS+ +R HLRR  +++V+ L  FF++EVVF+F+NDP +  + E+H CI+ +NS ++ G+S Q  RA+DI VECR +  GTITQF GNFS  TQQV+CS  AMY++   +   +T+ E+     D   GCV  GG  G  CVFV+Q  N S  S PF+LD++  LP+ +  + TELHF PPS++ +FA RA   FL+NI   + LRR IYSGA +  C F + +G AT VPLA+IV LA VW   + +F S F LR+ +FF + +PM W  + V   +    +N +L
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGNFSSRTQQVECSTEAMYTHPLGD---ETSEEIVA---DVPFGCV-SGGEEGAACVFVQQRGNLSLISAPFFLDELSILPDTLPHIITELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAMFASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDNPVL 324          
BLAST of Ggra1119.t1 vs. uniprot
Match: A0A2V3IMC1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC1_9FLOR)

HSP 1 Score: 149 bits (376), Expect = 2.820e-38
Identity = 101/321 (31.46%), Postives = 165/321 (51.40%), Query Frame = 0
Query:    1 MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISIRSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQQVQCSDNAMYSYKY-SENQGKTAGELNLTRLDAELGCVPDGGRNGCVFVKQVANTSYCSEPFYLDQIKSLPE-----KMLFLTTELHFKPPSDLKIFARRALRTFLENIGSKAVLRRAIYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKRMFFDVSNPMDWGRQI 315
            MV I LK+ +VS+I TI++ + E+  I++L T+N    C+ L+  + + +R++  R  II ++S  +F  +E++ +FF+DP      +   C+SV N  + +G   +   A+ I  +C+ +         GN S+   QV+CS  A Y Y   S ++ K      L    AE+ C  +     CVFV +  N++Y S     D +  L       +M FL TEL F     L +FA RA+  FLE +     LRR ++ G+ + NCPF     + T VP  ++  L F W   ++ F+   +LR+++FFDV NP+ W  Q+
Sbjct:    1 MVTIALKAQYVSLIITIISFICEVIFIAALQTVNSIRECQLLKQKKQLRVRNYRHRAKIIALISALLFLGLEIIVSFFSDPVQLELFQSEPCVSVDNVLRLQGPQGEFREADFIEGKCQTLRGNFNYVRVGNVSLSDGQVRCSKKAAYFYDIVSASETK-----KLPVSTAEVSCKGET----CVFVFEQQNSTYFSGALLPDIVAELRSGAVDTEMAFLKTELLFDSSEMLPVFAGRAVDAFLEQVNDPFELRRRVFLGSAKKNCPFVEEVIDGTSVPRQLLYSLLFAWIVALLFFVLCLVLRRKVFFDVGNPLHWAIQV 312          
BLAST of Ggra1119.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 138 bits (347), Expect = 6.010e-34
Identity = 94/332 (28.31%), Postives = 171/332 (51.51%), Query Frame = 0
Query:    1 MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISIRSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQQVQCSDNAMYSYKYSENQGKTAGELNLTRL-----DAELGCVPDGGRNGCVFVKQVA-------NTSYCSEPFYLDQIKSLP---EKMLFLTTELHFKPPSDLKI---FARRALRTFLENIGSKAVLRRAIYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKRMFFDVSNPMDWGRQ 314
            MVLI LKS +VS+I TI++ L+E++L+ +LL +N +  C  LQ G  +S+  H  R + + +++   FF++E++ +F++DP+     +   C++V    +  G+         I + C    E  I    GN+S+ET++V+C+++A   +    +     G            D  L C  DG    CV ++  +        T + S+ F+ D++  L      + FL T + F   ++ ++   FA R L+ + EN+     LRR ++ G+++  C F  R  EAT VP  +IV ++ VW   +  +  + LL +R+F+D+SNP+ W ++
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCA-DGF---CVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTI-FSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQ-RTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKR 326          
BLAST of Ggra1119.t1 vs. uniprot
Match: A0A2V3IT05 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 135 bits (339), Expect = 1.720e-32
Identity = 97/339 (28.61%), Postives = 167/339 (49.26%), Query Frame = 0
Query:    1 MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISIRSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQ---QVQCSDNAMYSYKYSENQGKTAGELNLTRL-----DAELGCV---PDGGRNG-----CVFVKQVANTS------YCSEPFYLDQIKSLPEKML---FLTTELHFKPPSDLKIFARRALRTFLENIGSKAVLRRAIYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKRMFFDVSNPMDWGRQ 314
            MV I LKS FVS+I T+++ L+E+ L  +LL  N +  C  L+ GR +S+R H  R   + VL++ +F  +EV+ +FF+DP+   +     C++V       G +      + I + C  I +    Q AGNFS+      +V+C  +A+Y Y   ++   T    N+TR      D  L C+   P  G        C  V+Q+   S      Y S      ++  L  + +   FL T + +      + FARR LR + +++     +R+ ++ G ++  C F+ RK + T VPL ++  +   W    + F S+ LLR+ +F+D+S+P+ W ++
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTL--TNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQR 337          
BLAST of Ggra1119.t1 vs. uniprot
Match: A0A2V3ISI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 8.350e-31
Identity = 95/333 (28.53%), Postives = 166/333 (49.85%), Query Frame = 0
Query:    1 MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISIRSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQQVQCSDNAMYSYKYSENQGKTAGELNLTRLDAELGCVPDGGRNGCVFV----KQVANTSYCSEP---FYLDQIKSLPEKMLFLTTELHFKPPSDLKIFARRALRTFLENIGSKAVLRRAIYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKRMFFDVSNPMDWGRQIVGTDEVAPSEN 326
            MVLI LKS + S+I TIL+ L+E+AL+S++L  N +  C+ L+ G  +++R H  R   + V +   F  +EV  +FF+DP+        SCIS+      RG      RA  + + C       + Q AGN S +  +++C D+ ++S     +  +   + +         C+ DG  N C F+     +V  T    +    F LD   +L    ++ TT +++      +   RR++    + +  + VLRR +++GA++T C FD+    AT +    +  +A  W   +  FL S  +R R+F+D+S+P+DW RQ V  ++ +  +N
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNIS-DDGEIKCGDDFLFSADIHHSPNEPVPDEHTME------CILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYAL---RVWKTT-VYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVFS-PATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDN 321          
The following BLAST results are available for this feature:
BLAST of Ggra1119.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J6F32.410e-9447.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC12.820e-3831.46Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A06.010e-3428.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT051.720e-3228.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI78.350e-3128.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 298..353
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..270
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..297
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 275..297
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000945_piloncontigtig00000945_pilon:97459..98520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1119.t1Ggra1119.t1Gracilaria gracilis GNS1m malemRNAtig00000945_pilon 97459..98520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1119.t1 ID=Ggra1119.t1|Name=Ggra1119.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=354bp
MVLIELKSPFVSVIGTILATLSEIALISSLLTLNGFYACKRLQAGRSISI
RSHLRRISIINVLSLFIFFSVEVVFAFFNDPSSFYRSEVHSCISVTNSAQ
ERGNSLQPTRANDIFVECRDIGEGTITQFAGNFSIETQQVQCSDNAMYSY
KYSENQGKTAGELNLTRLDAELGCVPDGGRNGCVFVKQVANTSYCSEPFY
LDQIKSLPEKMLFLTTELHFKPPSDLKIFARRALRTFLENIGSKAVLRRA
IYSGAQQTNCPFDIRKGEATIVPLAVIVVLAFVWGTPIVIFLSSFLLRKR
MFFDVSNPMDWGRQIVGTDEVAPSENLLLKKDEEQRTIVVISASAEETVV
CNI*
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