Ggra1115.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1115.t1
Unique NameGgra1115.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length349
Homology
BLAST of Ggra1115.t1 vs. uniprot
Match: A0A2V3J6K4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K4_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 1.480e-92
Identity = 201/357 (56.30%), Postives = 246/357 (68.91%), Query Frame = 0
Query:    3 RSIPRTPRNEQFFALSQALFERGDMDQSSCGAQRPDIEQCIKRCNSPGLQERDGCCCIIDNATFFIGVRGGCRYNQRIQNFTQS--FIYKSTPINSDKPYFDRFTCAFTDENANADSCTCTLQWEASPDTLQLTSPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTPPTAIATASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------SVCVAHSYLTERRFGAQQLVHGGDGVMSAVLCPQHADLPCASAHHKVRYHGRDLSYRQLCEY--VRCVPDRMLVNSVFSHAWREVQHGDVVLTMFDARYAEAPQKALHALMHKLRVVRQRW 347
            RSIP TP N+QFFALSQ+L ++GD  QSSCG QRPD+ +CI+RCN+PG +ER+GCCCI+ + +FF+G+RGGCRYNQ I  F+ +  FIY+ST INSDKP FD+ +CAFT+ENAN +SCTCTLQWEA+ D L   SP+P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXX                                +VCV H YL    +  + L+HG DGVMS VLCP++  LPC SA+H +R +G  +SY QLC+   V C  D + VNSV++H W EV HGD VLTM+D RY E  Q+ALH++MHK+R VR+R+
Sbjct:   25 RSIPTTPENQQFFALSQSLLDQGDFSQSSCGPQRPDLIECIQRCNAPGPKEREGCCCIVADNSFFVGIRGGCRYNQTILRFSSNDNFIYQSTTINSDKPNFDKTSCAFTEENANRESCTCTLQWEATADRLAAVSPLPTPSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPTDDQTVVDMDGSVEPSISPGDXXXXXXXXXTVCVDHQYLINAGYPTEHLIHG-DGVMSPVLCPRNTQLPCGSANHMIRANGVSMSYLQLCDSPAVECESDHIKVNSVYTHLWNEVAHGDHVLTMYDIRYPERAQRALHSVMHKMRTVRKRF 380          
BLAST of Ggra1115.t1 vs. uniprot
Match: R7Q3Z9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3Z9_CHOCR)

HSP 1 Score: 204 bits (518), Expect = 7.530e-56
Identity = 165/430 (38.37%), Postives = 210/430 (48.84%), Query Frame = 0
Query:    3 RSIPRTPRNEQFFALSQALFERGDMDQSSCGAQRPDIEQCIKRCNSPGLQERDGCCCIID-NATFFIGVRGGCRYNQRIQNFTQSFIYKSTPINSDKPYFDRFTCA-FTDENANADSCTCTLQWEASPDTLQLTSPIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTPPTAIATASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------GSVCVAHSYLTERRFGAQQLVHGGDGVMSAVLCPQHADLPCASAHHKVRYHGRDLSYRQLCEYVRCVPDRMLVNSVFSHAWREVQHGDVVLTMFDARYAEAPQKALHALMHKLR 341
            R+IP T  N+++FA +QALF  G+  +SSCG +   IE CI+ CN PGLQER GCCC+     +FF+G+RGGCRY Q++ NFT   IY+S P++  + YFD  +CA   +   +A SCTC++QWEA+ D L L  P+     XXXXXXXXXXXXX             XXXXXXXX   ++  PT +AT+SP                        XXXXXXXXXXX                                                                                         G+VCV   +L    +  + +VH   GVM  VLCP    LPC +A HKVR  G+++SY+QLCE VRC  D  +VNSV+SH W E  H +V LTMFDARY E  QKALH++MH  R
Sbjct:  339 RAIPGTSANQEYFARTQALFAFGNRTESSCGPEVASIETCIRSCNRPGLQERSGCCCVATPERSFFVGLRGGCRYRQQLLNFTSRLIYESKPVDQRRRYFDPISCAPVAEAGDDAGSCTCSIQWEAATDELDLVQPLASPTPXXXXXXXXXXXXXSVPPTPSPVSPTRXXXXXXXXT--VIDIPT-VATSSPSSVDVEPTPAVEDKPAETDMEDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQETEEPGEGEVDAESTPDMTDDEGMPLLDAXXXXXXXXXXXXXXXXXXGDGSATDDAVASAEASVTPEDDGTVCVDEEHLLAAGYDRRHMVHAR-GVMQRVLCPAVGGLPCGTADHKVRRMGKNVSYKQLCESVRCSHDVKVVNSVYSHLWTETTHEEVTLTMFDARYPERAQKALHSVMHLAR 764          
The following BLAST results are available for this feature:
BLAST of Ggra1115.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6K41.480e-9256.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q3Z97.530e-5638.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 139..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000945_piloncontigtig00000945_pilon:81003..82049 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1115.t1Ggra1115.t1Gracilaria gracilis GNS1m malemRNAtig00000945_pilon 81003..82049 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1115.t1 ID=Ggra1115.t1|Name=Ggra1115.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=349bp
MSRSIPRTPRNEQFFALSQALFERGDMDQSSCGAQRPDIEQCIKRCNSPG
LQERDGCCCIIDNATFFIGVRGGCRYNQRIQNFTQSFIYKSTPINSDKPY
FDRFTCAFTDENANADSCTCTLQWEASPDTLQLTSPIPSPSSSPSPVLSP
PMSIPPIKTPEPMDTPTVEPTVQPTTVPTIVTPPTAIATASPSPSEPAPT
EPELTPFADADAAEPSPSPDGDDDDDDGSVCVAHSYLTERRFGAQQLVHG
GDGVMSAVLCPQHADLPCASAHHKVRYHGRDLSYRQLCEYVRCVPDRMLV
NSVFSHAWREVQHGDVVLTMFDARYAEAPQKALHALMHKLRVVRQRWM*
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