Ggra11132.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11132.t1
Unique NameGgra11132.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Homology
BLAST of Ggra11132.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 1.190e-19
Identity = 78/283 (27.56%), Postives = 127/283 (44.88%), Query Frame = 0
Query:    2 AMFLGVEIFFSVSISPIVRHSVVQQSCV--RTLVANNSTFSDSIEAEAISFKCKTVTSSDVQVMHGNYSLESGDIACAEQSAYSYS--------IGEERQVN----WTDGVQSCDFRIC------SWVFLRSDI------LFVSDPVSIDIEAGDSITTYPTNVSSMGITAQDVPRISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAIVIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWARFATGDANCTERDDPHLEYRKEN 258
            A F  +E+  S    P V+ +   Q CV   TL   +     S+E   I   C     S++ +  GNYS+E+  + CAE +   ++        IG    V+    + D +  C    C      S+    SD       +F +D VS+       I    T + S     + +P+ ++RL++ Y +   D  E+RR + L S R +C F+    +AT V    IV + TVW+ SL  +A++LLL  ++F+D+ +PVHWA+      +     DP +    EN
Sbjct:   66 AAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRTS-EATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLEN 347          
BLAST of Ggra11132.t1 vs. uniprot
Match: A0A2V3IUG0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG0_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 3.890e-12
Identity = 62/250 (24.80%), Postives = 126/250 (50.40%), Query Frame = 0
Query:    1 MAMFLGVEIFFSVSISPIVRHSVVQQSCVRT-----LVANNSTFSDSIEAEAISFKC-KTVTSSDVQVMHGNYSLESGDIACAEQSAYSYSIG--EERQVNWTDGV-QSCDFRICSWVFL-RSDI-LFVSDPV---SIDIEAGDSITTYPTNVSSMGITAQ-DVPRISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAIVIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWA 235
            M  F+ +E+  S    P   H   +Q+C +       +A N +    +  E + + C +T +S+ + +  G  S ++G + C ++  + Y     +  Q +  D V + C+ + C+ V L RS   +F+S PV   S D +  + I    TN++      Q DV  ++ +++ +Y QG  D+ ++RRR+L+ S +  C F  ++ + + +    + +I ++W +   LF ++ +L+  +F+D+ +P HWA
Sbjct:   79 MITFIALEVLISTFTKPHTHHIESKQNCTQVNRTENFLALNDSDERRMSEEMVLYSCLRTNSSNIINISTGVKSEDTGAVQCNQEWIFQYENDRTDHEQFSERDEVGKQCNEQFCTLVSLDRSGTRMFLSKPVPRASFDSD-NNKIDGKWTNLN---FNVQIDVKIMATKVLGLYEQGVFDELDVRRRLLVQSKKQECQFSSDRKEHSVLPFWLLGLIISMWGTCAFLFILTRVLKRGVFYDIDNPSHWA 324          
BLAST of Ggra11132.t1 vs. uniprot
Match: A0A2V3ICZ9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICZ9_9FLOR)

HSP 1 Score: 66.2 bits (160), Expect = 7.070e-9
Identity = 63/246 (25.61%), Postives = 118/246 (47.97%), Query Frame = 0
Query:    2 AMFLGVEIFFSVSISPIVRHSVVQQSCVRTLVANNSTFSDSIEAEAISFKCKTVTSSD----VQVMHGNYSLESGDIACAEQSAYSYSIGEE--RQVNWTD---GVQSCDFRICSWVFLRSDILFVSDPVSIDIEAGDSITTYPTNVSSMGITAQDVPRISQRLME--MYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAIVIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWAR 236
            A F+ VEI    SI   +R +   + CV+T +     F+ SIE  + S+  +T  S      +Q+   N+S+ S  ++CA++  Y   I +   RQ+       G        CS+  L +     ++ +  + E   + T +          +QD+  IS+RL+   ++ +  +D D I  R+LL S  ++C+F   + +ATRV +V + ++ ++W+ S++LF        K+ FDL   + W++
Sbjct:   66 AAFIIVEIIVGASIEDELRMTPFTEPCVQTGINTGQEFT-SIEQPSRSYLAQTSCSKFKDFWLQIFLTNFSVTSTVVSCADEPVYELHIRDRSRRQIGQAKPYCGENEWGVTFCSFTSLETGTFSFTELLD-EGEKSMNETKFIDVKLFFEPDSQDI--ISKRLLRVILHGESAMDLDAILSRVLLGSRLSTCTFFKAR-NATRVPVVLMCVLVSIWLCSILLFVCVACSSRKMLFDLNKSLDWSK 306          
BLAST of Ggra11132.t1 vs. uniprot
Match: A0A2V3ISI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 62.0 bits (149), Expect = 1.990e-7
Identity = 59/269 (21.93%), Postives = 115/269 (42.75%), Query Frame = 0
Query:    4 FLGVEIFFSVSISPIVRHSVVQQSCVR--TLVANNSTFSDSIEAEAISFKCKTVTSSDVQVMHGNYSLESGDIACAEQSAYSYSIGEERQVNWTDG-VQSC----DFRICSWVFLR-SDILFVSDPVSIDI----EAGDSITTYPTNV--SSMGITAQDVPRISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAIVIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWARFATGDANCTERDDPHLEYRKEN 258
            F+ +E+  S    P ++   V +SC+    L         S+ A  +   C    +S +  + GN S + G+I C +   +S  I         D     C    +  +C++++   S++ F    +  D+    +   ++  + T V  ++ G+  +    + +R + +      DQ  +RR +   +    C+F+     AT +    +  I   W  SL  F  SL +R ++F+D+ DP+ WAR    D + ++ D+P +  R EN
Sbjct:   68 FVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNIS-DDGEIKCGDDFLFSADIHHSPNEPVPDEHTMECILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGMERE----LLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVFS-PATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYEN 330          
The following BLAST results are available for this feature:
BLAST of Ggra11132.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5A01.190e-1927.56Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUG03.890e-1224.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICZ97.070e-925.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI71.990e-721.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 198..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:92190..92987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11132.t1Ggra11132.t1Gracilaria gracilis GNS1m malemRNAtig00000110_pilon 92190..92987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11132.t1 ID=Ggra11132.t1|Name=Ggra11132.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MAMFLGVEIFFSVSISPIVRHSVVQQSCVRTLVANNSTFSDSIEAEAISF
KCKTVTSSDVQVMHGNYSLESGDIACAEQSAYSYSIGEERQVNWTDGVQS
CDFRICSWVFLRSDILFVSDPVSIDIEAGDSITTYPTNVSSMGITAQDVP
RISQRLMEMYSQGTIDQDEIRRRILLTSGRASCSFEGEQFDATRVSLVAI
VIICTVWISSLVLFAISLLLRNKIFFDLQDPVHWARFATGDANCTERDDP
HLEYRKENQVIHICE*
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