Ggra11129.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11129.t1
Unique NameGgra11129.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length388
Homology
BLAST of Ggra11129.t1 vs. uniprot
Match: R7QTW8 (Translation elongation factor EF-G2, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTW8_CHOCR)

HSP 1 Score: 129 bits (325), Expect = 3.280e-29
Identity = 60/79 (75.95%), Postives = 68/79 (86.08%), Query Frame = 0
Query:  297 RVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFT 375
            RV G IAHINSGKTTTSEAMLY AGALRRMGNVD GDT++DYLP ER+RGITI+AA+    W+ H+ F+VDSPGHLDFT
Sbjct:   39 RVLGAIAHINSGKTTTSEAMLYTAGALRRMGNVDVGDTTLDYLPDERERGITINAAAVSFNWKDHQIFLVDSPGHLDFT 117          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A2V3J3M5 (Elongation factor G n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3M5_9FLOR)

HSP 1 Score: 129 bits (323), Expect = 7.040e-29
Identity = 59/82 (71.95%), Postives = 71/82 (86.59%), Query Frame = 0
Query:  294 SLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFT 375
            S +RV G++AHINSGKTTTSEAML+H+G L RMG+VD G T++DY PQER+RGITI+AAS  L WR+H FF+VDSPGHLDFT
Sbjct:   22 SRTRVLGLVAHINSGKTTTSEAMLFHSGYLTRMGSVDIGSTTLDYQPQERRRGITITAASAYLSWRRHNFFLVDSPGHLDFT 103          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A397FEK0 (Tr-type G domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FEK0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.500e-25
Identity = 45/81 (55.56%), Postives = 65/81 (80.25%), Query Frame = 0
Query:  297 RVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            R  GI+AHI++GKTTT+E ML+++GA++RMG V  GDT+MD++PQER+RGITI +A+   PW+ H   ++D+PGH+DFT  
Sbjct:   17 RNIGILAHIDAGKTTTTERMLFYSGAIKRMGEVHDGDTTMDFMPQERERGITIGSAAISFPWKGHHINLIDTPGHVDFTIE 97          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A821B3W5 (Hypothetical protein n=1 Tax=Rotaria socialis TaxID=392032 RepID=A0A821B3W5_9BILA)

HSP 1 Score: 115 bits (288), Expect = 3.510e-25
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:  293 PSLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            P   R  GIIAHI++GKTTT E MLYHAG +R MGNVD G+T+MDY+ QER+RGITI++A+  +PW +HR  ++D+PGH+DFT  
Sbjct:   25 PQRIRNVGIIAHIDAGKTTTVERMLYHAGFIRSMGNVDDGNTTMDYMEQERERGITITSAAITIPWNKHRINLIDTPGHVDFTIE 109          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A1X6P920 (Tr-type G domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P920_PORUM)

HSP 1 Score: 118 bits (295), Expect = 3.670e-25
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0
Query:  296 SRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            +R  G+IAH+++GKTTT+E MLY+AGALR MG+VDAG T+MDYLP ER RGITI+AAST  PWR  R  ++D+PGH+DFT  
Sbjct:   60 TRNLGVIAHVDAGKTTTTERMLYYAGALRAMGDVDAGSTAMDYLPAERARGITIAAASTSFPWRGTRLSLIDTPGHVDFTVE 141          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A815DL06 (Hypothetical protein n=3 Tax=Rotaria TaxID=231623 RepID=A0A815DL06_9BILA)

HSP 1 Score: 115 bits (287), Expect = 4.750e-25
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:  293 PSLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            P   R  GIIAHI++GKTTT E MLYHAG +R MGNVD G+T+MDY+ QER+RGITI++A+  +PW +HR  ++D+PGH+DFT  
Sbjct:   36 PERIRNVGIIAHIDAGKTTTVERMLYHAGLIRSMGNVDEGNTTMDYMEQERERGITITSAAITIPWIKHRINLIDTPGHVDFTIE 120          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A819GQZ5 (Hypothetical protein n=12 Tax=Rotaria TaxID=231623 RepID=A0A819GQZ5_9BILA)

HSP 1 Score: 115 bits (289), Expect = 1.920e-24
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:  293 PSLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            P   R  GIIAHI++GKTTT E MLYHAG +R MGNVD G+T+MDY+ QER+RGITI++A+  +PW +HR  ++D+PGH+DFT  
Sbjct:   36 PQRIRNVGIIAHIDAGKTTTVERMLYHAGFIRSMGNVDDGNTTMDYMEQERERGITITSAAITIPWNKHRINVIDTPGHVDFTIE 120          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A661VG86 (Elongation factor G (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VG86_9CHLR)

HSP 1 Score: 106 bits (264), Expect = 2.150e-24
Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = 0
Query:  297 RVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            R  GIIAHI++GKTTT+E +LY+ G   R+GNVD G T  D++PQER+RGITI AA+    WR H+  I+D+PGH+DFTA 
Sbjct:   11 RNIGIIAHIDAGKTTTTERVLYYTGRTHRLGNVDEGTTVTDFMPQERERGITIQAAAITCQWRDHQINIIDTPGHIDFTAE 91          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A813MUZ3 (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A813MUZ3_9BILA)

HSP 1 Score: 115 bits (288), Expect = 2.580e-24
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:  293 PSLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            P   R  GIIAHI++GKTTT E MLYHAG +R MGNVD G+T+MDY+ QER+RGITI++A+  +PW +HR  ++D+PGH+DFT  
Sbjct:   36 PQRIRNVGIIAHIDAGKTTTVERMLYHAGFIRSMGNVDDGNTTMDYMEQERERGITITSAAITIPWNKHRINLIDTPGHVDFTIE 120          
BLAST of Ggra11129.t1 vs. uniprot
Match: A0A818PZK7 (Hypothetical protein n=8 Tax=Rotaria TaxID=231623 RepID=A0A818PZK7_9BILA)

HSP 1 Score: 115 bits (288), Expect = 2.580e-24
Identity = 51/85 (60.00%), Postives = 67/85 (78.82%), Query Frame = 0
Query:  293 PSLSRVFGIIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITISAASTCLPWRQHRFFIVDSPGHLDFTAS 377
            P   R  GIIAHI++GKTTT E MLYHAG +R MGNVD G+T+MDY+ QER+RGITI++A+  +PW +HR  ++D+PGH+DFT  
Sbjct:   36 PERIRNVGIIAHIDAGKTTTVERMLYHAGLIRFMGNVDEGNTTMDYMEQERERGITITSAAITIPWNKHRINLIDTPGHVDFTIE 120          
The following BLAST results are available for this feature:
BLAST of Ggra11129.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QTW83.280e-2975.95Translation elongation factor EF-G2, mitochondrial... [more]
A0A2V3J3M57.040e-2971.95Elongation factor G n=1 Tax=Gracilariopsis chorda ... [more]
A0A397FEK03.500e-2555.56Tr-type G domain-containing protein n=2 Tax=Aphano... [more]
A0A821B3W53.510e-2560.00Hypothetical protein n=1 Tax=Rotaria socialis TaxI... [more]
A0A1X6P9203.670e-2564.63Tr-type G domain-containing protein n=1 Tax=Porphy... [more]
A0A815DL064.750e-2560.00Hypothetical protein n=3 Tax=Rotaria TaxID=231623 ... [more]
A0A819GQZ51.920e-2460.00Hypothetical protein n=12 Tax=Rotaria TaxID=231623... [more]
A0A661VG862.150e-2458.02Elongation factor G (Fragment) n=1 Tax=Chloroflexi... [more]
A0A813MUZ32.580e-2460.00Hypothetical protein n=6 Tax=Adineta steineri TaxI... [more]
A0A818PZK72.580e-2460.00Hypothetical protein n=8 Tax=Rotaria TaxID=231623 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Translational (tr)-type GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 298..311
score: 47.92
coord: 344..352
score: 64.81
coord: 364..374
score: 57.59
IPR000795Translational (tr)-type GTP-binding domainPFAMPF00009GTP_EFTUcoord: 297..378
e-value: 1.5E-23
score: 83.4
IPR000795Translational (tr)-type GTP-binding domainPROSITEPS51722G_TR_2coord: 294..387
score: 28.995604
IPR011079Alanine racemase, C-terminalSMARTSM01005Ala_racemase_C_2coord: 74..203
e-value: 8.7E-29
score: 111.6
IPR011079Alanine racemase, C-terminalPFAMPF00842Ala_racemase_Ccoord: 74..201
e-value: 8.5E-26
score: 90.1
IPR009006Alanine racemase/group IV decarboxylase, C-terminalGENE3D2.40.37.10Lyase, Ornithine Decarboxylase; Chain A, domain 1coord: 48..211
e-value: 1.8E-31
score: 110.4
IPR009006Alanine racemase/group IV decarboxylase, C-terminalSUPERFAMILY50621Alanine racemase C-terminal domain-likecoord: 71..205
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 304..332
e-value: 5.2E-30
score: 106.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 297..377
e-value: 5.2E-30
score: 106.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 293..378
NoneNo IPR availablePANTHERPTHR43261TRANSLATION ELONGATION FACTOR G-RELATEDcoord: 287..378
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 337..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:82811..85319 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11129.t1Ggra11129.t1Gracilaria gracilis GNS1m malemRNAtig00000110_pilon 82811..85319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11129.t1 ID=Ggra11129.t1|Name=Ggra11129.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=388bp
MPPSSAVQYALVLESRKYTKANERSPRFRVKSKSSTSKVRCESSASHKAG
RSNLALWAIYAPEEHSTANFLLGAVTLKTRLAFTNICDKDETVSYGRLYK
IRRYGTRIGAIAVGYAEGMRAQKDHCVVIRGKKVPVVGRICADFSMVDLS
AVPEAEAGDSVLILGKDEHTGCEMSWDEAAEAAGSPPHQMMARGMLRLRR
RFVSNTLVRVQHATKDPAHLARTACLAAVIPIASDSERRTYCFASTRAHM
LPMAPALRALLRRTYRIACPPHALHRHLSRFVHNAPDNSPTSPSLSRVFG
IIAHINSGKTTTSEAMLYHAGALRRMGNVDAGDTSMDYLPQERQRGITIS
AASTCLPWRQHRFFIVDSPGHLDFTASTLGIYLQRLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795T_Tr_GTP-bd_dom
IPR011079Ala_racemase_C
IPR009006Ala_racemase/Decarboxylase_C
IPR027417P-loop_NTPase
IPR031157G_TR_CS