Ggra11125.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra11125.t1
Unique Name	Ggra11125.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	110

Homology

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BLAST of Ggra11125.t1 vs. uniprot
Match: A0A2V3IDK1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDK1_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 9.180e-49
Identity = 86/109 (78.90%), Postives = 97/109 (88.99%), Query Frame = 0

Query:    1 MAQGSQKLAARGPKGGRGVQKRASKMRKGKLSRKPKKQKLAEVHNKNKKLTAAIARNIERVTGKKLQQNGGDLSLLKKVRNAAKNGGNEVSAKAAAPKFDTRKQFRLTS 109
            MAQGSQKLA R P+GGRGVQKRASKM+KG LSRKP+KQKLA+ +NKNKKLTAAI RNIE+V GK+L QNGGDLSLLK+V  AAK+GG+EVS K  AP+FDTRKQFRLTS
Sbjct:    1 MAQGSQKLAVRAPRGGRGVQKRASKMKKGALSRKPRKQKLAQANNKNKKLTAAIGRNIEKVAGKRLMQNGGDLSLLKRVSRAAKSGGDEVSKKTNAPRFDTRKQFRLTS 109

[Close]

BLAST of Ggra11125.t1 vs. uniprot
Match: R7QLN0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLN0_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 1.410e-36
Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = 0

Query:    1 MAQGSQKLAARGPKGGRGVQKRASKMRKGKLSRKPKKQKLAEVHNKNKKLTAAIARNIERVTGKKLQQNGGDLSLLKKVRNAAKNGGNEVSAKAAAPKFDTRKQFRLTS 109
            MAQGS +L+    KGGR  +K  SKM+KG L RKPKKQ LA  HNK+KKLTAAI RNIER TGK+L QNGG+LS+LKKV  AAK+GG+E S  A APKF+T+K+FRLTS
Sbjct:    1 MAQGSSRLSRPVAKGGRSNRKHGSKMKKGTLIRKPKKQSLAAAHNKSKKLTAAIGRNIERATGKRLAQNGGNLSVLKKVAKAAKSGGDESSKTAEAPKFNTKKRFRLTS 109

The following BLAST results are available for this feature:

BLAST of Ggra11125.t1 vs. uniprot

BLAST of Ggra11125.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IDK1	9.180e-49	78.90	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QLN0	1.410e-36	66.97	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019034	Uncharacterised protein family UPF0390	PFAM	PF09495	DUF2462	coord: 1..80 e-value: 8.8E-10 score: 39.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000110_pilon	contig	tig00000110_pilon:71708..72233 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra11125.t1	Ggra11125.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000110_pilon 71708..72233 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra11125.t1 ID=Ggra11125.t1|Name=Ggra11125.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=110bp
MAQGSQKLAARGPKGGRGVQKRASKMRKGKLSRKPKKQKLAEVHNKNKKL
TAAIARNIERVTGKKLQQNGGDLSLLKKVRNAAKNGGNEVSAKAAAPKFD
TRKQFRLTS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019034	UPF0390