Ggra11086.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11086.t1
Unique NameGgra11086.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length553
Homology
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A2V3J2X1 (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2X1_9FLOR)

HSP 1 Score: 376 bits (965), Expect = 2.140e-121
Identity = 284/569 (49.91%), Postives = 325/569 (57.12%), Query Frame = 0
Query:    1 MLQSSQTEQQLRDARKRIAALERELQLLRSSTPSPXXXXXXXXXSCPSLGAPSPTSRPNRKPIMTRRAXXXXXXXXXXXXXXXSTHNTAVRSAPSSPSTIAHFSQLSTPNPSEHGSSHSTPLLSCYAPL-SPKCLQTFETKSVLCSETNQVSQCSKRQIGLTSS-NHTPTNTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKRNASPPNCDANSLNSKPKAQNVSASSXXXXXXXXXXXXXXXXXXXXXXSTKKEKAQVVAKCTEPRAGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPIQMPAGMRPVIELAVGNKSTIVTITADQTIKLASKSVTDISNIDPCIVRALSASHTQYQCEVKRRAALRTARE-------DELVKRCSECSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGEKTANVADPYLHYIGTATEGKDDMEMERALAVGLTAS-------EGAKEC-ELMVSDGSSDGGRSCGADEHELEDLRKLDDGDMALASFSDMEL 552
            ML+ S TE QLR+ARKRIAALERELQLLR++TP  XXXXXXXXX                        XXXXXXXX       S   +       S ST   +S+LS+ +PSEHGSS + P+ S   P+ + K  Q  ETKSVL +ETNQVS CSKR+  LTS  N + T+                        X      XXX        S+  N S     A      P    V  +                        TKKEK  +VAKCTEPR GQTRYWTE EHERFLEAV EYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPI MPAGMRPVIE+ VGNKSTIVTITADQTIKLASK  TDIS IDP IV ALSAS +QYQ +VK+RAAL  ARE       D L+K+ S  +                                     E  +++ DPYLHYIGT T+GKD+ME+E   A  LT +       EGAKE  E ++S+GSSD   S GA E ELEDL KL+DGD+ALASFS+M+L
Sbjct:    1 MLKPSTTELQLREARKRIAALERELQLLRATTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVVSPTTSASPSXXXXXMLSSSTTPQYSELSSVDPSEHGSSSNAPIASHTQPICASKAQQPSETKSVLSTETNQVSHCSKRETNLTSHYNKSCTDAPPASCAHPSNNKTATAATTTNHSXTCNSHSXXXTASHARTNSTVNNKSTNKSAAVPRRRPPPLPVVKTTC-----------------------TKKEKVHLVAKCTEPRPGQTRYWTEEEHERFLEAVAEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPIHMPAGMRPVIEMEVGNKSTIVTITADQTIKLASKCATDISEIDPNIVSALSASQSQYQSQVKKRAALSAARETKTVKGEDALIKQSSTVTE------------------------------------ENISSLTDPYLHYIGTGTDGKDEMEIENTFAAELTQTLQESQEKEGAKEGGEYLMSEGSSDEADSSGAGEDELEDLDKLEDGDLALASFSNMDL 510          
BLAST of Ggra11086.t1 vs. uniprot
Match: R7Q4N1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4N1_CHOCR)

HSP 1 Score: 215 bits (548), Expect = 6.100e-60
Identity = 135/302 (44.70%), Postives = 173/302 (57.28%), Query Frame = 0
Query:  264 TKKEKAQVVAKCTEPRAGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPIQMPAGMRPVIELAVGN-KSTIVTITAD-QTIKLASKSVTDISNIDPCIV-----RALSASHTQYQCEVKRRAALRTAREDELVKRCSECSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRGEKTANVADPYLHYIGTATEGKDDMEMERALAVGLTAS-------EGAKECELMVSDGSSDGGRSCGADEHELEDLRKLDDGDMALASFSDME 551
            TKKE+  +VAKCTEPR GQTRYWTE EHERFLEAV EYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLA+Q IEAG+PIQMPAGM PV+++   + KST+V + AD Q   + +K    +S   P ++     R      T  +C    +   +     + + + S C S E                                  E  +   DPY+ YIG A++ K +ME+E + A  L          EG +E E ++SD  S+  R    D+ +LEDL KLDDG+ ALA+F++ E
Sbjct:  205 TKKERHSIVAKCTEPRPGQTRYWTEEEHERFLEAVAEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLAKQSIEAGEPIQMPAGMNPVVQVPTADGKSTLVPLAADGQANHVLAKLGNVMSGHVPVMMAPPPRRGEGKKRTGRKCGNGSKKEKKAGVSRDALVKMSSCVSEE-------------------------------MSDENASGQTDPYMEYIGGASDPKVEMELEHSFAAKLQTLNGGGHVVEGGREGEFLMSDEGSNDSRRVDKDDDDLEDLDKLDDGEFALAAFTNTE 475          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A2V3J5I5 (Myb-like protein I n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5I5_9FLOR)

HSP 1 Score: 82.8 bits (203), Expect = 1.290e-13
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:  268 KAQVVAKCTEPRAGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLAR 337
            +A+  A   E +AG+TRYWT  EH++FL AV  +G K YVAIS +V TRTPKQVRTHAQK+QMK+ R A+
Sbjct:  131 RARGGASDDEDKAGKTRYWTAKEHQQFLYAVKLFGPKNYVAISQFVGTRTPKQVRTHAQKYQMKLEREAK 200          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S1TD26 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TD26_9RHOD)

HSP 1 Score: 78.2 bits (191), Expect = 1.170e-11
Identity = 38/55 (69.09%), Postives = 42/55 (76.36%), Query Frame = 0
Query:  282 QTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLA 336
            QTRYWT  EHERFL  V  YG+K Y+AIS  V TRTPKQVRTHAQKFQ ++ R A
Sbjct:  247 QTRYWTPEEHERFLRGVKLYGDKNYIAISKIVVTRTPKQVRTHAQKFQKRLEREA 301          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S0W3K7 (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W3K7_9CRYP)

HSP 1 Score: 73.9 bits (180), Expect = 2.240e-11
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 0
Query:  277 EPRAGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQ 344
            +P + Q+RYWT  EH+RFLEA+  YG K    I+++V TR+  QVRTHAQK+ +K+A+LARQ  + G+
Sbjct:   67 DPASSQSRYWTVQEHQRFLEAIQNYGPKDVKMIASHVSTRSATQVRTHAQKYFIKLAQLARQKEQGGR 134          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S0BJX4 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJX4_9RHOD)

HSP 1 Score: 72.8 bits (177), Expect = 1.840e-10
Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 0
Query:  286 WTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMAR-LARQCIEAGQPIQMPAGMRPVI 356
            WT+ EH+RFL A   YG K YVAIS YV +RTPKQVRTHAQK+Q ++ R  AR+   +  P   P    PVI
Sbjct:    1 WTQEEHQRFLRACQMYGNKNYVAISRYVRSRTPKQVRTHAQKYQKRLEREAARRSEGSSMPRFSPPCQGPVI 72          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S0BIZ1 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIZ1_9RHOD)

HSP 1 Score: 69.7 bits (169), Expect = 2.080e-10
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  284 RYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMAR 334
            RYWTE EH +FLE    YG K Y AIS  V TRTPKQVRTHAQK++M++ R
Sbjct:    6 RYWTEEEHRKFLEGRKLYGPKNYAAISAVVGTRTPKQVRTHAQKYEMRLVR 56          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A5J4Z933 (Myb-like protein I n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z933_PORPP)

HSP 1 Score: 73.9 bits (180), Expect = 4.150e-10
Identity = 33/55 (60.00%), Postives = 45/55 (81.82%), Query Frame = 0
Query:  280 AGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMAR 334
            A QTRYWT+ EH+RFL+A  ++GEKAYV+I+ YV +R+ KQVRTHAQK+  ++ R
Sbjct:  424 AKQTRYWTQAEHDRFLQACAKFGEKAYVSIAEYVGSRSAKQVRTHAQKYAKRLER 478          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S1TE66 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE66_9RHOD)

HSP 1 Score: 70.9 bits (172), Expect = 5.250e-10
Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = 0
Query:  264 TKKEKAQVVAKCTEPRAGQTRYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPIQMPAGMRPVIELAVGN 362
            TK++K +  A    P  GQ+RYWT  EH+RFLEA+  Y  K   AI+N+V TR   QVRTH QK+ MK+ R A++ + A      P G R  +++  G+
Sbjct:  119 TKRKKGKAPASAKVP--GQSRYWTPEEHKRFLEALQLYNHKDLKAIANHVGTRNQTQVRTHTQKYFMKIVREAKR-LPANPISSPPDGSREQLDVVDGD 214          
BLAST of Ggra11086.t1 vs. uniprot
Match: A0A7S2ZYC5 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYC5_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 5.860e-10
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  284 RYWTEHEHERFLEAVGEYGEKAYVAISNYVETRTPKQVRTHAQKFQMKMAR 334
            RYWTE EH +FLE    YG K Y AIS  V TRTPKQVRTHAQK++M++ R
Sbjct:  112 RYWTEEEHRKFLEGRKLYGPKNYAAISAVVRTRTPKQVRTHAQKYEMRLVR 162          
The following BLAST results are available for this feature:
BLAST of Ggra11086.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2X12.140e-12149.91Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
R7Q4N16.100e-6044.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J5I51.290e-1360.00Myb-like protein I n=1 Tax=Gracilariopsis chorda T... [more]
A0A7S1TD261.170e-1169.09Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S0W3K72.240e-1151.47Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S0BJX41.840e-1054.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0BIZ12.080e-1064.71Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4Z9334.150e-1060.00Myb-like protein I n=1 Tax=Porphyridium purpureum ... [more]
A0A7S1TE665.250e-1042.42Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZYC55.860e-1064.71Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..31
NoneNo IPR availableGENE3D1.10.10.60coord: 284..335
e-value: 4.6E-13
score: 51.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..529
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..474
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 265..462
NoneNo IPR availablePANTHERPTHR12802:SF125SUBFAMILY NOT NAMEDcoord: 265..462
IPR001005SANT/Myb domainSMARTSM00717santcoord: 282..331
e-value: 2.6E-9
score: 46.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 286..329
score: 6.097918
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 286..328
e-value: 7.44395E-10
score: 52.5778
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 284..330
e-value: 8.2E-10
score: 36.8
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 285..327
e-value: 5.6E-11
score: 42.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 286..333
score: 13.796206
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 282..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:81719..83377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11086.t1Ggra11086.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 81719..83377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11086.t1 ID=Ggra11086.t1|Name=Ggra11086.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=553bp
MLQSSQTEQQLRDARKRIAALERELQLLRSSTPSPPPPPTPPPPSCPSLG
APSPTSRPNRKPIMTRRAAAAAAAAAAVAVVSSSTHNTAVRSAPSSPSTI
AHFSQLSTPNPSEHGSSHSTPLLSCYAPLSPKCLQTFETKSVLCSETNQV
SQCSKRQIGLTSSNHTPTNTTTNTNTTTTTTTTTTTTTTHNKYNNNNNNN
SSNNNNNRASHSSKRNASPPNCDANSLNSKPKAQNVSASSAARSSLPPPR
RRAPALAVVKTTSTKKEKAQVVAKCTEPRAGQTRYWTEHEHERFLEAVGE
YGEKAYVAISNYVETRTPKQVRTHAQKFQMKMARLARQCIEAGQPIQMPA
GMRPVIELAVGNKSTIVTITADQTIKLASKSVTDISNIDPCIVRALSASH
TQYQCEVKRRAALRTAREDELVKRCSECSSSEGEEEQPQPQPQAQAQAQA
QAQPQAQAQAQAQPRGEKTANVADPYLHYIGTATEGKDDMEMERALAVGL
TASEGAKECELMVSDGSSDGGRSCGADEHELEDLRKLDDGDMALASFSDM
EL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR009057Homeobox-like_sf