Ggra11084.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11084.t1
Unique NameGgra11084.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
[Close]
BLAST of Ggra11084.t1 vs. uniprot
Match: A0A2V3J315 (Coiled-coil domain-containing protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J315_9FLOR)

HSP 1 Score: 177 bits (450), Expect = 4.770e-53
Identity = 166/190 (87.37%), Postives = 176/190 (92.63%), Query Frame = 0 
Query:   15 QIRELRRQLSALKLDLAREKHRRQAAEEHVRELRRESTLNQIRVEEEEEMISNKLMKRLSELKHEKEQIARASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELERKVQRLSRSTTPGALTPTSSPALSLRSVDGSLSRNGSYRLSAPASTFAQSALHQTANPSPPQ 204
            QIR+LRRQLS+LKLDLAREK RRQAAEEHVRE+RRESTLNQIR+EEEEEMISNKLMKRLSELK EKEQIARAS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EL+RKVQRLSRSTTPGALTPTSSPALSLRS DGSLSRNGSYRLS+ A+ F  + LHQ ++ S  Q
Sbjct:   16 QIRDLRRQLSSLKLDLAREKQRRQAAEEHVREVRRESTLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELQRKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLSS-AAPFPSAPLHQPSSASQSQ 204
The following BLAST results are available for this feature:
BLAST of Ggra11084.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3154.770e-5387.37Coiled-coil domain-containing protein 6 n=1 Tax=Gr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..122
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableCOILSCoilCoilcoord: 124..151
NoneNo IPR availableCOILSCoilCoilcoord: 2..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..198
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 11..151
e-value: 4.2E-20
score: 72.1
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 8..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:78725..79339 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11084.t1Ggra11084.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 78725..79339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11084.t1 ID=Ggra11084.t1|Name=Ggra11084.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MSDEASREHDASELQIRELRRQLSALKLDLAREKHRRQAAEEHVRELRRE
STLNQIRVEEEEEMISNKLMKRLSELKHEKEQIARASETDSEYVTNSLSQ
RLEELQRQKHRIIAAAEEENEYIVNRLNKELDALRSEKHELERKVQRLSR
STTPGALTPTSSPALSLRSVDGSLSRNGSYRLSAPASTFAQSALHQTANP
SPPQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046