Ggra11079.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11079.t1
Unique NameGgra11079.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length326
Homology
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A2V3J3U0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3U0_9FLOR)

HSP 1 Score: 477 bits (1227), Expect = 2.650e-167
Identity = 226/325 (69.54%), Postives = 273/325 (84.00%), Query Frame = 0
Query:    1 MDDPNEFPSMPEPGGRGHAMEATASMIWTLLFLAYSSSTFLSEFSRGWAAVWTIVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIINIFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARFTRPSRMKPEREIPTIIGVYMLSVTDELLFRGMMQNMFEQRLGPNSPIALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHAGGDYLMWHVFLRKTNET 325
            MDD +EFP +PE GGRGHAMEATA+MIWTLLFLAYSSSTFLSEFSRGWAA WT  LVI+P+T+AG PKV ER+PGAV NLI Y+AYGLVPSFIQLMQH DI+S++SE ADL+TVLIIWLPLE  LL+ ELSATG+VTAWG LTAALNI+NIFS+LRP S +P AR+LGY+FK ++ D+    + A ++   GMV AT+IRFARFTRPSR+KPERE+ T++G+YM  + +ELLFRG++QNM EQRLG +S IAL++A++A+G+   RKPKQGF  PN+RY  V   CG+F GLAWRITGKVTASA+THA GDYL+W  FLRK+NET
Sbjct:    1 MDDADEFPKIPETGGRGHAMEATAAMIWTLLFLAYSSSTFLSEFSRGWAAAWTAFLVIVPVTIAGTPKVLERRPGAVLNLICYMAYGLVPSFIQLMQHADITSLSSEIADLVTVLIIWLPLELKLLSEELSATGKVTAWGLLTAALNIVNIFSVLRPFSTIPNARDLGYTFKVSIPDILVALVCAMVHAFVGMVTATVIRFARFTRPSRLKPEREVLTLLGMYMSGLAEELLFRGVIQNMLEQRLGQDSLIALIVASVAYGVAHLRKPKQGFSAPNIRYAVVTASCGIFCGLAWRITGKVTASAVTHAVGDYLIWRAFLRKSNET 325          
BLAST of Ggra11079.t1 vs. uniprot
Match: R7QQ15 (Uncharacterized protein n=4 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ15_CHOCR)

HSP 1 Score: 187 bits (474), Expect = 1.670e-55
Identity = 88/153 (57.52%), Postives = 115/153 (75.16%), Query Frame = 0
Query:   10 MPEPGGRGHAMEATASMIWTLLFLAYSSSTFLSEFSRGWAAVWTIVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIINIFSILRPLSDVP 162
            MPEPGGR H +E++ASM WTLLFLAYSSSTF++EF  GW A WT++LV++P+ LAG   + + +  AV  L +Y+AY L+PS +QL +  D SS+ SE ADLITVL IWLPLEF LL++++S TG+VTAWG  TAAL ++  F+ILRP    P
Sbjct:    1 MPEPGGRAHTLESSASMCWTLLFLAYSSSTFVNEFGHGWQAAWTVLLVLVPVCLAGAANIMDARRRAVPILAIYIAYILIPSLLQLTKPDDHSSLRSEMADLITVLCIWLPLEFKLLSSDISPTGKVTAWGLFTAALTVVKCFTILRPFQSWP 153          
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A1X6NZW7 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZW7_PORUM)

HSP 1 Score: 123 bits (309), Expect = 2.570e-29
Identity = 82/258 (31.78%), Postives = 123/258 (47.67%), Query Frame = 0
Query:   15 GRGHAMEATASMIWTLLFLAYSSSTFLSEFS-RGWAAVWTIVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIINIFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARFTRPSRMKP---EREIPTIIGVYMLSVTDELLFRGMMQNMFEQRLGP--NSPIALVLAALAFGMTRWR 266
            G     E TA++ WT+LF+  SSS FL+  S   + A   + ++ LPI LA +P +  R P     L  Y AY   P  +Q  + G    +A  A D +TV  +W PLE  LL A LSATG V  WG  T  L+ + +F+++RP      A  +GY++K +  DV  G            VL   +      RP        E +    + +Y  ++ +E+LFRG++QN+    LGP     + L L A+ +  +  R
Sbjct:   15 GLSRGCEGTAALAWTVLFMLLSSSRFLTSLSDTPYPAATAVAVIGLPIALASVPLLLLRPPQTARTLGAYAAYIAAPIGLQAARPGG---LAGHAVDAVTVAALWAPLEARLLPAALSATGTVAVWGMCTGLLSAVTVFTVVRPT-----AVPIGYTYKLSAGDV--GVXXXXXXXXVATVLPVAVAVGTAGRPHSFAASGVEAKGGLAVALYASALAEEILFRGLVQNLVADTLGPAYGRGVPLGLGAVVYAASHLR 262          
BLAST of Ggra11079.t1 vs. uniprot
Match: R7Q577 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7Q577_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 2.370e-26
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 0
Query:  224 MLSVTDELLFRGMMQNMFEQRLGPNSPIALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHAGGDYLMWHVFLRK 321
            M  VT+EL+FRGM+QNM EQRLG  S  A ++A++AFG+    K K G+ PPN+RY+A A V G+  G  WR TGKVTASA+T A  +Y+MW V L K
Sbjct:    1 MNGVTEELIFRGMIQNMLEQRLGHGSISAPLIASVAFGIAHLGKSKLGYDPPNVRYMASACVTGVACGFVWRQTGKVTASALTQATSNYIMWRVTLSK 98          
BLAST of Ggra11079.t1 vs. uniprot
Match: R7QRL8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRL8_CHOCR)

HSP 1 Score: 102 bits (255), Expect = 1.050e-23
Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = 0
Query:   71 ERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIINIFSILRPLSDVP 162
            + +  AV  L +Y+AY L+PS +QL +  D SS+ SE ADLITVL IWLPL+F LL++++S TG+VTAWG  TAAL ++N F+ILRP    P
Sbjct:    2 DGRRRAVPILAIYIAYILIPSLLQLTKPDDHSSLRSEMADLITVLCIWLPLDFKLLSSDISPTGKVTAWGLFTAALTVVNCFTILRPFQSWP 93          
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A3M1HVN4 (CPBP family intramembrane metalloprotease n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A3M1HVN4_9CHLR)

HSP 1 Score: 104 bits (260), Expect = 2.830e-22
Identity = 86/276 (31.16%), Postives = 138/276 (50.00%), Query Frame = 0
Query:   54 IVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLA---AELSATGRVTAWGQLTAALNIINIFSILRPLSDVPKAR------------------ELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARFTRPSRMKPEREIPTIIGVYML-SVTDELLFRGMMQNMFEQRLGPNSPIALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITH 307
            ++L++LP+ L+ LP+     P  + + +VYLA   +P+   L++        +     +TVL IWLPLE +L A   A L A      +G    AL++ ++ + L P  D+P A+                   +G+  +    D+    +    + + G+ L   +RF RF       PE  +  IIG Y+L ++ +ELLFRG++QN+  +RL P +  AL + A+ FG +       GF  PN  Y+ +AT+ GL  G  W  TG+VTASA+TH
Sbjct:   39 VLLLLLPVILSTLPR---PHPLLLLDYLVYLA---IPTI--LLRLASRYRRFTPLLYTLTVLAIWLPLETDLFALPFARLLARQPSDFFG----ALSLPDVAAGLLPQVDLPVAKLTGILLALYLFLVRQPLPGIGFDLRLRRSDLASALVGLLAFAVIGIPLGLSLRFLRFNPVLPTLPEL-LAMIIGGYLLVALAEELLFRGIIQNLLGRRLHPLA--ALAVTAVIFGASHLNNATPGFPVPNWAYMLMATLAGLAYGWVWWRTGRVTASALTH 299          
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A1F9TZD9 (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFCSPLOWO2_01_FULL_54_10 TaxID=1797945 RepID=A0A1F9TZD9_9BACT)

HSP 1 Score: 101 bits (252), Expect = 5.390e-21
Identity = 87/302 (28.81%), Postives = 150/302 (49.67%), Query Frame = 0
Query:   32 FLAYSSSTFLSEFSRGWAAVWTIVLVILPITLAGLPKVFERKPGAVTN-LIVYLAYGL-VPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAA-ELSATGRVTAWGQLTAALNI-INIFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLAT---LIRFARFTRPSRMKPEREIPTIIGVYML-SVTDELLFRGMMQNMFEQRLGPNSP---IALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHAGGDYLMWHVFLRKT 322
            ++ +SSS F     +   A W +  ++LP ++     +     GA +  L++ LA  + VP  + L+  G +        +++  L++WLP+EF  L+  ++  T  +       AA  + + +F+I+R L D+      GY+F++ + D     L         + + T    I F++F  P    P + +  + G+Y L ++ +ELLFRG+ QN+  + LG        AL LA+L FG + +      F PP+ RYV +AT+ GLF G  +  TGK T SA+ H G ++L W +F + T
Sbjct:   50 YILFSSSDFCGRVRQFAGASW-LNRILLPSSILLSYLIASLWNGAFSGFLLLKLALWIFVP--LGLLSVGWLKGHPFYPKEILAALLLWLPIEFGYLSGFDIKFTEGIQIPALAFAAPVLGLYLFAIVRDLPDI------GYNFRWKLSDFKPVALSLGALAFLLIPIGTHLGFISFSQFDTP----PAKMVEFLFGIYFLVALPEELLFRGIFQNLLVKTLGAQGRGFWTALFLASLIFGFSHY----NNFDPPDYRYVFLATLAGLFYGWTYHRTGKTTVSALVHTGVNFL-WAIFFKDT 333          
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A7C6ASX1 (CPBP family intramembrane metalloprotease n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C6ASX1_9BACT)

HSP 1 Score: 100 bits (249), Expect = 1.620e-20
Identity = 91/316 (28.80%), Postives = 149/316 (47.15%), Query Frame = 0
Query:   24 ASMIWTLLFLAYSSST------FLSEFSR---GWAAVWTIVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGDISSMASEAADLITVLIIWLPLEFNLLAAELSATGR-VTAWGQLTAALNIINIFSILRPLSDVP-----KARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARFTRPSRMKPE--REIPTIIGVYMLS-VTDELLFRGMMQNMFEQRLGPNS---PIALVLAALAFG----------MTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHA 308
            AS I+ ++ LA  + T      FL   +R   GW  ++ ++  +L    +G        P A+      LAY LVP+   L +   ++       DL+ +L IW P+E + ++      GR V   G L A    +  F  +R ++ V      ++RELG++F + +  + +         I G+          F RPS   P   R + T++ +++ + + +E+LFRG++QN+  QRLG      PI+L + ++ FG          +  W     G IP    YV +AT+ G+F GLA+  TGKVTA+AI HA
Sbjct:   41 ASAIFAIVLLATLAFTDPRVVEFLRRLARRGPGWVVLFPLLAWVLAAAYSGFVA-HGPIPWAL------LAYALVPAI--LARLASLTGSKPNLWDLLAILAIWFPVELDWISGPPLPPGRGVVGLGSLLAMPLALYAFLAVRRVAGVGFHLDFRSRELGWAFVYFLAFIPFAL-------ILGLPTG-------FIRPSTEFPSLARIVFTLVAIFLFTGIPEEVLFRGLIQNLLAQRLGEGGRWKPISLAVTSVIFGWAHVNNRVPPLAEWHLGPLGTIPVPWVYVVLATIAGVFYGLAYLRTGKVTAAAIVHA 333          
BLAST of Ggra11079.t1 vs. uniprot
Match: W0RTL7 (Abortive infection protein n=1 Tax=Gemmatirosa kalamazoonesis TaxID=861299 RepID=W0RTL7_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 2.700e-17
Identity = 70/240 (29.17%), Postives = 116/240 (48.33%), Query Frame = 0
Query:   83 YLAYGLVPSFIQLMQHGDIS-SMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIINIFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARFTRPSRMKPEREIPTIIGVYMLSVTDELLFRGMMQNMFEQRLGPNSPIALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHAGGDYLMWHVFLRK 321
            + AY + P+ + L   G I+    +   +L  V + WLP+E  LL       G      +L A    + +F ++R L DV      G++F    +DV    +  ALY    + +    RF  +  P        +  ++   ++++ +E LFRG++QN+  +  GP  P  L++A++ FG+            P+ RYV +AT+ G+  GL +  TG+VTASAITHA  D L W + L +
Sbjct:   12 FAAYLVAPTVVLL---GRITPERRAPVRELTAVALFWLPIELGLLPRIPGPNG--VDLSKLVAFGAALVLFLVVRRLPDV------GFTFALRWRDVGVAVVACALYAPVAIAVGLTTRFIAW-HPQPSAATLVVRPLLIYALIALPEEFLFRGLIQNLLARWWGPERPWPLLVASVIFGLAHL---------PDPRYVVLATLAGVAYGLVYEHTGRVTASAITHALVDAL-WVLLLPR 229          
BLAST of Ggra11079.t1 vs. uniprot
Match: A0A1F9V7B8 (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFCSPLOWO2_12_FULL_39_28 TaxID=1797951 RepID=A0A1F9V7B8_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 4.600e-17
Identity = 67/210 (31.90%), Postives = 110/210 (52.38%), Query Frame = 0
Query:  110 DLITVLIIWLPLEFNLLAA-ELSATGRVTAWG-QLTAALNIINIFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIRFARF--TRPSRMKPEREIPTIIGVYML-SVTDELLFRGMMQNMFEQRLGPNSPIALVL--AALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKVTASAITHAGGDY 312
            D + VL++WLP+EF  L+  +++    +T       A +  + +F ILR L       ++GY F +N +D+    L   L   + + L T + F +F  T PS       +  I+G+Y L ++ +ELLFRG++QN+  +      P  LVL  A++ FG + W      F P ++RYV +A++ GL  G  +  TGK T SA+ H G ++
Sbjct:  140 DWVGVLLLWLPIEFGALSGFDITFKPGLTIPALPFVAVIQGLYLFRILRNLP------QIGYDFLWNFKDLKIAFLALFLLAFSLIPLGTQMGFIQFSFTPPSF---GETVKLILGIYFLVAIPEELLFRGLIQNLLFKSFNGKVPWFLVLSTASIIFGFSHW----NNFTPADIRYVFLASLAGLGYGFVYFKTGKTTISALVHCGVNF 336          
The following BLAST results are available for this feature:
BLAST of Ggra11079.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3U02.650e-16769.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQ151.670e-5557.52Uncharacterized protein n=4 Tax=Chondrus crispus T... [more]
A0A1X6NZW72.570e-2931.78Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7Q5772.370e-2655.10Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QRL81.050e-2354.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A3M1HVN42.830e-2231.16CPBP family intramembrane metalloprotease n=1 Tax=... [more]
A0A1F9TZD95.390e-2128.81Uncharacterized protein n=1 Tax=Elusimicrobia bact... [more]
A0A7C6ASX11.620e-2028.80CPBP family intramembrane metalloprotease n=1 Tax=... [more]
W0RTL72.700e-1729.17Abortive infection protein n=1 Tax=Gemmatirosa kal... [more]
A0A1F9V7B84.600e-1731.90Uncharacterized protein n=1 Tax=Elusimicrobia bact... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003675Type II CAAX prenyl endopeptidase Rce1-likePFAMPF02517Rce1-likecoord: 223..312
e-value: 3.0E-10
score: 40.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 277..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 159..177
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 297..325
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 238..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..107
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 266..276
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..199
NoneNo IPR availableTMHMMTMhelixcoord: 277..296
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 111..130
NoneNo IPR availableTMHMMTMhelixcoord: 245..262
NoneNo IPR availableTMHMMTMhelixcoord: 179..201
NoneNo IPR availableTMHMMTMhelixcoord: 77..96
NoneNo IPR availableTMHMMTMhelixcoord: 137..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:63716..64693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11079.t1Ggra11079.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 63716..64693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11079.t1 ID=Ggra11079.t1|Name=Ggra11079.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=326bp
MDDPNEFPSMPEPGGRGHAMEATASMIWTLLFLAYSSSTFLSEFSRGWAA
VWTIVLVILPITLAGLPKVFERKPGAVTNLIVYLAYGLVPSFIQLMQHGD
ISSMASEAADLITVLIIWLPLEFNLLAAELSATGRVTAWGQLTAALNIIN
IFSILRPLSDVPKARELGYSFKFNVQDVFYGTLFAALYTITGMVLATLIR
FARFTRPSRMKPEREIPTIIGVYMLSVTDELLFRGMMQNMFEQRLGPNSP
IALVLAALAFGMTRWRKPKQGFIPPNLRYVAVATVCGLFSGLAWRITGKV
TASAITHAGGDYLMWHVFLRKTNET*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003675Rce1-like