Ggra11078.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11078.t1
Unique NameGgra11078.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Homology
BLAST of Ggra11078.t1 vs. uniprot
Match: A0A2V3J384 (Proteasome subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J384_9FLOR)

HSP 1 Score: 402 bits (1034), Expect = 1.730e-141
Identity = 196/216 (90.74%), Postives = 208/216 (96.30%), Query Frame = 0
Query:    1 MNPIEPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            M PI+PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPM DKI+CCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAK+FRTFCYYNK QLMAGIIVAG+D KKGGQVFTIPLGGALVQQPFAIGGSGSSYIYG+CD+N+K+GM+KEEC  FVKNALSLAM+RDGSSGGVIRLVIIDK G++REFHPGNKLP FWQG
Sbjct:    1 MTPIQPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMHDKIYCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKIFRTFCYYNKGQLMAGIIVAGYDDKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGFCDSNYKEGMTKEECITFVKNALSLAMARDGSSGGVIRLVIIDKSGSSREFHPGNKLPEFWQG 216          
BLAST of Ggra11078.t1 vs. uniprot
Match: R7Q3I5 (Proteasome subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3I5_CHOCR)

HSP 1 Score: 369 bits (947), Expect = 3.140e-128
Identity = 180/216 (83.33%), Postives = 196/216 (90.74%), Query Frame = 0
Query:    1 MNPIEPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            M+P   EW + EHSMGTSIMAVAFDGGVVMGADSRTTTG+YIANRVSDKITPMTDKI+CCRSGSAADTQIISDYVR+YLSMH IEL E+PDV TAAK+FR  CY+NK QLMAGIIVAG D  KGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCD+NFK+GM+KEEC EFVKNALSLAM+RDGSSGGV+RLV+IDK G+ R+F PGNKLP FW G
Sbjct:    1 MDPYGQEWMNAEHSMGTSIMAVAFDGGVVMGADSRTTTGAYIANRVSDKITPMTDKIYCCRSGSAADTQIISDYVRYYLSMHDIELGEDPDVDTAAKLFRELCYHNKGQLMAGIIVAGWDKHKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDSNFKEGMTKEECMEFVKNALSLAMARDGSSGGVVRLVVIDKDGSERKFFPGNKLPEFWMG 216          
BLAST of Ggra11078.t1 vs. uniprot
Match: Q7XYA9 (Proteasome subunit beta (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XYA9_GRIJA)

HSP 1 Score: 340 bits (871), Expect = 1.370e-116
Identity = 167/205 (81.46%), Postives = 184/205 (89.76%), Query Frame = 0
Query:   12 EHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            EHSMGTSIMAV FDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIF CRSGSAADTQIISDY R+YLSMH IEL E+P V T A++F   CY+NKE LMA IIV G+DA+KGGQVF+IPLGGAL++QPF IGGSGSSYIYGYCDANFK+GMSK+EC EFVKNALSLAM+RDGSSGGVIRLV+IDK GA+R+F  G+KLP FW G
Sbjct:   16 EHSMGTSIMAVTFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFVCRSGSAADTQIISDYCRYYLSMHHIELGEDPRVETTARLFNQLCYHNKEMLMASIIVGGYDARKGGQVFSIPLGGALIKQPFTIGGSGSSYIYGYCDANFKEGMSKDECIEFVKNALSLAMARDGSSGGVIRLVVIDKDGASRQFIHGDKLPQFWVG 220          
BLAST of Ggra11078.t1 vs. uniprot
Match: A0A1X6NSP2 (Proteasome subunit beta n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSP2_PORUM)

HSP 1 Score: 313 bits (801), Expect = 6.460e-106
Identity = 152/211 (72.04%), Postives = 178/211 (84.36%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQV---FTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVF 213
            PEW + EHSMGTSIMAVAFDGGVV+GADSRTTTG+YIANRVSDKITPMTD IFCCRSGSAADTQ ISDYVR+YL MH +E+   P V TAA++FR  CY NK QLMAG+I AG D+ KGGQV   F +P+GG+LV+QPFAIGGSGS+YIYGYCDA++K+GM+KEEC+ FVKNA++LAMSRDGSSGGVIR+V +DK G  R    G ++P F
Sbjct:   11 PEWMTAEHSMGTSIMAVAFDGGVVLGADSRTTTGTYIANRVSDKITPMTDSIFCCRSGSAADTQAISDYVRYYLDMHVVEMGTPPLVKTAARLFRELCYSNKTQLMAGMICAGWDSAKGGQVRQVFCVPIGGSLVEQPFAIGGSGSTYIYGYCDAHYKEGMTKEECQAFVKNAVALAMSRDGSSGGVIRMVTVDKDGTDRTCFGGEQVPSF 221          
BLAST of Ggra11078.t1 vs. uniprot
Match: A0A5J4Z3G2 (Proteasome endopeptidase complex n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3G2_PORPP)

HSP 1 Score: 314 bits (805), Expect = 6.740e-106
Identity = 151/210 (71.90%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    7 EWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            +WT+TEH MGT+IMA AFDGGVVMGADSRTTTGSYIANRVSDKITP+TDK++CCRSGSAADTQ ISDYVR Y + HAIEL +EP V T A +FR  CY NK  LMAGII AG D   GGQV+ I LGG+ VQQPF+IGGSGS+YIYGYCD+NF++ M+++EC EFVK+AL+LAM+RDGSSGGVIR+VIID  G  + F PG+KLP+ WQG
Sbjct:   54 DWTNTEHMMGTTIMATAFDGGVVMGADSRTTTGSYIANRVSDKITPITDKVWCCRSGSAADTQAISDYVRLYTAQHAIELGQEPRVKTVANLFREICYSNKANLMAGIICAGWDQFSGGQVYNITLGGSCVQQPFSIGGSGSTYIYGYCDSNFRENMTRDECVEFVKHALALAMARDGSSGGVIRMVIIDSSGVQKVFIPGDKLPMAWQG 263          
BLAST of Ggra11078.t1 vs. uniprot
Match: A9UWM7 (Proteasome subunit beta n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWM7_MONBE)

HSP 1 Score: 301 bits (770), Expect = 2.840e-101
Identity = 140/216 (64.81%), Postives = 180/216 (83.33%), Query Frame = 0
Query:    1 MNPIEPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            M P +P+W + EH  GT+IMAV F  GVV+GADSRTTTGSY+ANRV+DK+T +TD I+CCRSGSAADTQ I+D VR+YL +H++E+ E+P+V TAA VFRTFCY N+E LMAGII AG D KKGGQV++IPLGG LV+QPF+IGGSGS+++YG+CDA++K+ M+K+EC +FV+ AL+LAMSRDGSSGGVIR  +I + G  RE   GN+LP F++G
Sbjct:    1 MEPAQPDWVTAEHLTGTTIMAVEFADGVVIGADSRTTTGSYVANRVTDKLTKITDNIYCCRSGSAADTQAIADIVRYYLDLHSMEMDEDPEVHTAASVFRTFCYNNRESLMAGIICAGWDKKKGGQVYSIPLGGLLVRQPFSIGGSGSTFLYGHCDASYKENMTKDECLKFVRTALALAMSRDGSSGGVIRTAVITEAGVEREVVLGNELPTFYEG 216          
BLAST of Ggra11078.t1 vs. uniprot
Match: PSB6 (Proteasome subunit beta type-6 n=4 Tax=Dictyosteliales TaxID=2058949 RepID=PSB6_DICDI)

HSP 1 Score: 300 bits (769), Expect = 3.760e-101
Identity = 144/211 (68.25%), Postives = 172/211 (81.52%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            PEW      +GTSIMAV +DGGV+MGADSRTTTG+YIANRV++KITP+ ++I+CCRSGSAADTQ ISDYVR+YL MH  EL +EPDV TAA +F+  CY NK  LMAGIIVAG D  +GG V+ I LGG++V+QPFAIGGSGS+YIYGYCD+ FK  M+K+EC EFV+N+L+LAM RDGSSGGVIRL IIDK G  R+  PGN LP FW+G
Sbjct:    4 PEWLDNAVDLGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGGSMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCIIDKNGVERKMIPGNNLPRFWEG 214          
BLAST of Ggra11078.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B9CE (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B9CE)

HSP 1 Score: 299 bits (766), Expect = 1.040e-100
Identity = 147/211 (69.67%), Postives = 174/211 (82.46%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            PEW +    +GTSIMAV FDGGVVMGADSRTTTGSYIANRV++KITP+ ++I+CCRSGSAADTQ ISDYVR+YL +H  EL E+P+V TAA +F+  CY NK QLMAGIIVAG D + GG V+ I LGG++V+QPFAIGGSGS+YIYGYCD+ F+  MSK+EC EFVKN+L+LAM RDGSSGGVIRL IIDK G  R   PGN+LP FW+G
Sbjct:    4 PEWLANAVDLGTSIMAVEFDGGVVMGADSRTTTGSYIANRVTNKITPIHERIYCCRSGSAADTQAISDYVRYYLEIHNSELGEDPEVKTAASLFQLLCYNNK-QLMAGIIVAGWDKQTGGSVYNISLGGSMVRQPFAIGGSGSTYIYGYCDSQFRPKMSKDECVEFVKNSLALAMFRDGSSGGVIRLCIIDKSGVERRMIPGNQLPRFWEG 213          
BLAST of Ggra11078.t1 vs. uniprot
Match: A0A7S3AC27 (Proteasome subunit beta n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC27_9RHOD)

HSP 1 Score: 301 bits (772), Expect = 1.200e-100
Identity = 139/210 (66.19%), Postives = 178/210 (84.76%), Query Frame = 0
Query:    7 EWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            +WT  EH +GTSIMAV +DGGV++GADSRTTTGSYIANRVSDKITP+T+K+FCCRSGSAADTQ ISDYVR+Y+SMHA+E+ EEP VAT  K+FR  CY NK  L+A II AG+D  +GGQV++I LGG++++QPFAI GSGSSYIYG+CD+NFK+GM K+E ++FV  AL+LAMSRDGSSGGVIR + I++ G  R+++ G ++P F++G
Sbjct:   69 DWTQNEHMLGTSIMAVVYDGGVILGADSRTTTGSYIANRVSDKITPITEKVFCCRSGSAADTQAISDYVRYYISMHALEIGEEPKVATVGKMFRLICYRNKANLLAAIICAGYDKHEGGQVYSITLGGSILKQPFAISGSGSSYIYGFCDSNFKEGMGKDEAEQFVIRALALAMSRDGSSGGVIRTLTINESGVERKYYSGKEIPGFYEG 278          
BLAST of Ggra11078.t1 vs. uniprot
Match: F4Q3J1 (Proteasome subunit beta n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q3J1_CAVFA)

HSP 1 Score: 294 bits (753), Expect = 1.020e-98
Identity = 142/211 (67.30%), Postives = 170/211 (80.57%), Query Frame = 0
Query:    6 PEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKITPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFRTFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSYIYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGATREFHPGNKLPVFWQG 216
            PEW      +GT+IMAV FDGGVVMGADSRTTTG+YIANRV++KITP+ +KI+CCRSGSAADTQ ISDYVR+YL MH  EL ++P V TAA +F+  CY NK  LMAGIIVAG D  KGG V+ I LGG++++QPFA+ GSGS+Y+YG+CDA FK GM+KEEC +FV+NAL+LAM RDGSSGGVIRL IIDK    R   PGN+LP FW+G
Sbjct:    4 PEWVDNAVDLGTTIMAVEFDGGVVMGADSRTTTGAYIANRVTNKITPIHEKIYCCRSGSAADTQAISDYVRYYLEMHTQELDDQPVVKTAASLFQLLCYNNKNNLMAGIIVAGWDKDKGGSVYNISLGGSMIKQPFAMSGSGSTYLYGHCDAQFKPGMTKEECVKFVQNALALAMFRDGSSGGVIRLCIIDKENVERRTIPGNQLPRFWEG 214          
The following BLAST results are available for this feature:
BLAST of Ggra11078.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3841.730e-14190.74Proteasome subunit beta n=1 Tax=Gracilariopsis cho... [more]
R7Q3I53.140e-12883.33Proteasome subunit beta n=1 Tax=Chondrus crispus T... [more]
Q7XYA91.370e-11681.46Proteasome subunit beta (Fragment) n=1 Tax=Griffit... [more]
A0A1X6NSP26.460e-10672.04Proteasome subunit beta n=2 Tax=Porphyra umbilical... [more]
A0A5J4Z3G26.740e-10671.90Proteasome endopeptidase complex n=1 Tax=Porphyrid... [more]
A9UWM72.840e-10164.81Proteasome subunit beta n=1 Tax=Monosiga brevicoll... [more]
PSB63.760e-10168.25Proteasome subunit beta type-6 n=4 Tax=Dictyosteli... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B9CE1.040e-10069.67hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S3AC271.200e-10066.19Proteasome subunit beta n=1 Tax=Rhodosorus marinus... [more]
F4Q3J11.020e-9867.30Proteasome subunit beta n=1 Tax=Cavenderia fascicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000243Peptidase T1A, proteasome beta-subunitPRINTSPR00141PROTEASOMEcoord: 181..192
score: 66.86
coord: 145..156
score: 71.78
coord: 156..167
score: 44.7
coord: 24..39
score: 61.79
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 15..195
e-value: 3.6E-45
score: 153.8
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 17..216
e-value: 1.2E-57
score: 196.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 7..202
IPR035140Proteasome subunit beta 6PANTHERPTHR11599:SF46PROTEASOME SUBUNIT BETA TYPE-6coord: 5..205
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 5..205
NoneNo IPR availableCDDcd03762proteasome_beta_type_6coord: 17..204
e-value: 2.39893E-127
score: 355.379
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 20..67
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 16..195
score: 46.743385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:62385..63035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11078.t1Ggra11078.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 62385..63035 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11078.t1 ID=Ggra11078.t1|Name=Ggra11078.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MNPIEPEWTSTEHSMGTSIMAVAFDGGVVMGADSRTTTGSYIANRVSDKI
TPMTDKIFCCRSGSAADTQIISDYVRHYLSMHAIELSEEPDVATAAKVFR
TFCYYNKEQLMAGIIVAGHDAKKGGQVFTIPLGGALVQQPFAIGGSGSSY
IYGYCDANFKDGMSKEECKEFVKNALSLAMSRDGSSGGVIRLVIIDKGGA
TREFHPGNKLPVFWQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000243Pept_T1A_subB
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035140Proteasome_beta6
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type