Ggra11076.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11076.t1
Unique NameGgra11076.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length490
Homology
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A2V3J331 (DNA polymerase delta small subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J331_9FLOR)

HSP 1 Score: 658 bits (1698), Expect = 2.220e-233
Identity = 332/491 (67.62%), Postives = 386/491 (78.62%), Query Frame = 0
Query:    1 MATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMKKPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPEDSYICLLSSLSLSTPSFALELLLEFLKGNTLEEDEAFQRNVVSVVIAGNLIPHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKK------FEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREF 485
             + GENG+H   R+ I ID  P+KRF+LP KKRYEPQYAHIYFCRLTALRPAL++ A   FGPPS+KL +AKRIVNVS E   + E+VIIGVVFRQM KPSILALYEQ SHDLIP+PP RA+ PYPG DD +FLEDENGRCTLD S  D IPD+FVTGF+VAVKG ED   GTFKV  F+ +L APQ  LK Y ED+YIC++SSL L  PSF +ELL EFLKGNTLEEDEAF  N V++VI GN+I HV  TP H+PLAVG+KERIASPMVDADRFLSG+AST+PVF+MPGE+DATN LLPQQ ++RCLLPS++RNSNF RVPNP  C   GR LLATSGQNV DFALY A+    +K++   ++  E+       +E  GERV +I+ +ML NRHIAPTCPDTLGSYPFYE DPFV+E TPHIFV GNQKEFG R + V  E SQ S E M ++GE+ G+V L+S PRFD +GQAVFVNLRNMEC VREF
Sbjct:   11 QSNGENGNHAKVRKTIPIDLEPSKRFVLPSKKRYEPQYAHIYFCRLTALRPALESTARVIFGPPSDKLHHAKRIVNVSSEGANERETVIIGVVFRQMTKPSILALYEQASHDLIPAPPPRATAPYPGADDTVFLEDENGRCTLDMSGFDQIPDAFVTGFVVAVKGKEDHLKGTFKVGSFTPVLAAPQPTLKPYEEDAYICIVSSLCLPQPSFGVELLGEFLKGNTLEEDEAFAMNTVALVITGNVIGHVSDTPTHQPLAVGEKERIASPMVDADRFLSGVASTLPVFYMPGEHDATNYLLPQQAVNRCLLPSASRNSNFHRVPNPLLCEMAGRSLLATSGQNVEDFALYAAE---SAKDQQNDNQMLERDPVNKGMYEADGERVLEIMGNMLKNRHIAPTCPDTLGSYPFYERDPFVIERTPHIFVVGNQKEFGARRIRVSTEGSQSSDEGMIVEGEICGTVCLVSAPRFDKSGQAVFVNLRNMECCVREF 498          
BLAST of Ggra11076.t1 vs. uniprot
Match: R7Q512 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q512_CHOCR)

HSP 1 Score: 476 bits (1225), Expect = 1.500e-161
Identity = 260/498 (52.21%), Postives = 338/498 (67.87%), Query Frame = 0
Query:    8 SHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSE-KLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPD--SFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPEDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEEDEAFQ-RNVVSVVIAGNLIPHVEATPM--------HKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYE-MDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESS-EEMNIDGELGG--SVRLISVPRFDSTGQAVFVNLRNMECFVREF 485
            SH   R    ID +PAKRF+LP KK+YEPQYAH+YF RL +L   +  +A+  FG   E KL+Y+KRI +++  S  ++E+V++GV+FR MK KPSILA Y+ PSH+LIP+PP RA+  YP  DD +F+EDE GRC LD S LDS     S VTGF++A+KG EDR TG+FKV+  S    APQ +L   P D +IC+ S+LS         A ELL+EFL+G+  E+ E     N+V +++AGN +P +E T          H+PL  G+KER+A+P+V+ DRFLS +AS++PV  MPGE D  N LLPQQP HRCLLPSS+RN N  RVPNPF C+ + R++L TSGQ V+DFALY+ Q       +  G      K  PSGE+V DIL  ML NRH+APTCPDTL S+PF +  DPFV+ESTPH+F AGNQ+E+ +R +  P   +Q SS   M+IDG  GG  +VR++SVPRFD TGQ V VNLR ++C VREF
Sbjct:   16 SHPTVRVVSEIDLSPAKRFILPKKKKYEPQYAHVYFSRLKSLTAHVLKSAKLTFGEGEEGKLQYSKRIADIA--SKDEMETVVVGVIFRHMKSKPSILAQYDVPSHELIPAPPDRATCTYPRDDDEVFIEDEYGRCALDLSQLDSAVATLSLVTGFVLALKGHEDRRTGSFKVNAISYAGQAPQKSLPELPGDKFICITSALSFGKADGDVLAAELLMEFLRGSAGEDPEGSTCANIVQLIVAGNSVPQLEDTESGPSAVLAAHRPLKSGEKERVAAPIVEVDRFLSVIASSLPVAVMPGEADPVNYLLPQQPFHRCLLPSSSRNENLARVPNPFECSVDKRVILGTSGQPVTDFALYEDQSSVMKDGKEAG------KLRPSGEKVLDILTLMLQNRHLAPTCPDTLASFPFSDGSDPFVLESTPHVFFAGNQREYASRLVRTPHVQTQASSGSSMDIDGVQGGEKTVRIVSVPRFDETGQVVLVNLRTLDCIVREF 505          
BLAST of Ggra11076.t1 vs. uniprot
Match: M2X386 (DNA polymerase delta subunit 2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X386_GALSU)

HSP 1 Score: 252 bits (644), Expect = 4.750e-75
Identity = 167/465 (35.91%), Postives = 246/465 (52.90%), Query Frame = 0
Query:   32 KRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPEDSYICLLSSLSLSTP---SFALELLLEFLKGNT-LEEDEAFQRNVVSVVIAGNLIPHVE----ATPMHKPLAVGDKERI--ASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREF 485
            + Y  QY+ IYFCRL ALRP ++ AA + +   ++ + +  R++++     Q    VIIGV++++M  KPSIL  Y +   + +P  P++ S  +    DV+ LEDE GR  L+        +  +TG +VAVKG E  S+G F V         P    +    D +I  +S + L  P   S    + L+F+ G    EED  F   +  + + GNL+        A   +    V   +++  A P++ ADRFL+ L+ST+PV  +PGE D TN LLPQQPLH  LLPSS++ ++F+RV NP+ C   GR +L  SGQN+ D   Y   +D  S E  L                  ++E+ML+ RH+ PT PDTL  YP+Y+ DPFV++  PH++VAGNQ  +GTR +N                 + G  VRL+ +P F +TGQ V +NLR +   V EF
Sbjct:   30 RNYSQQYSQIYFCRLAALRPVVENAARNKW---TDGILFRDRLLHLQ----QGDNCVIIGVIYKEMDLKPSILKEYSKNPAEPVPILPVKPS--FVSDSDVVILEDETGRIRLNFDRCCLGVNILLTGTVVAVKGQE-TSSGDFSVDELCFPGIPPLKVPRSLDNDIFILFVSGIGLGAPWNVSMREAMFLDFITGKLGNEEDYHFCSQIGHLFVLGNLLSSAGDETLANKSNDQQTVNSAQQLFNAEPLISADRFLTTLSSTIPVTLLPGEADPTNLLLPQQPLHHSLLPSSSKYNSFRRVTNPYQCCINGRKILVCSGQNIDDACRYST-WDWNSVENRL-----------------TVMENMLSFRHLCPTAPDTLPCYPYYDEDPFVLKECPHVYVAGNQHAYGTRLINA---------------NDCG--VRLLCIPDFSTTGQVVLLNLRTLTPQVMEF 449          
BLAST of Ggra11076.t1 vs. uniprot
Match: DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6 (DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C6)

HSP 1 Score: 240 bits (612), Expect = 1.810e-70
Identity = 176/500 (35.20%), Postives = 247/500 (49.40%), Query Frame = 0
Query:    1 MATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGP------DDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQM-ALKRYPEDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEEDEAFQRN---VVSVVIAGNLIPHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREFG 486
            MA  E     IER+    +S   + F +  +     QY+ IYF RL  +R  L +       P  +       ++ + G    D E VI+G +++ MK KP +L  Y +           R+ TP   P      DD + LEDE+GR  L  + L   P  +VTG +VA+ G E    G F V         PQ+    +  ED Y+  +S L+L + S     ++LL++ + G+  +E E  Q N   +V VVIAG+ +         + LA  D+ R++ P+ + D  L+ +A+++P+  MPG ND +N  +PQQPLHRCL PSSA  + FK   NP +   +G   L TSGQN+ DF     +Y  GS+E                    + LE  L  RHIAPT P+TLG YPF + DPF VES PH++ AGNQ +FGTR                 I G  G  VRLIS+PRF  TG AV +N+RN+EC    FG
Sbjct:    1 MAVMEEEQSDIERKQSLYNSMD-EEFKIQKEMYRGQQYSQIYFARLHLMRTLLYSLV-----PTWKPHLPVCTVLGLEG----DKECVIVGTLYKHMKLKPCVLDEYSKE----------RSVTPLVQPHNFVHSDDYLILEDESGRVKLSGTTLS--PSFYVTGIVVALHGKE-TGAGDFLVEDVLEAGLPPQLDPPNKLGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGDEKE--QNNAAQIVQVVIAGDSVEIPRELLNGQNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFE----KYSEGSEE-------------------VEFLERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRL----------------ITGSDGQVVRLISIPRFSKTGTAVMLNMRNLECHALSFG 436          
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A7S1XHK7 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHK7_9RHOD)

HSP 1 Score: 226 bits (577), Expect = 5.350e-66
Identity = 151/423 (35.70%), Postives = 217/423 (51.30%), Query Frame = 0
Query:   88 VIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYP----------GPDDVIFLEDENGRCTLDASALDSIPDS----FVTGFIVAVKGAEDRSTGTFKVSGFSSI-LPAPQMALKRYP---EDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEEDEAFQR---NVVSVVIAGNLIPHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREF 485
            V++G+VFR +  KPSIL  Y +   D+IP+PP R    Y           G +D IFLEDE+GR  LD S L+          V+G IVA++G  ++  G   V       LP      +  P   ED ++C+LS L+         A++L+ EF+K N    D  FQ+    +V +++AG LI   E   +               + + D  L  +AS++P+  +PG+ D TN LLPQQP+++CLLPSS+R    +R PNP+     GR  L T GQNV DF  Y        + ++ G+           E++  +LE M+ +RH+APT PDTL SYPFYE DPF+++  P +F AG+Q +FGT+ +                  E    VR+ISVP F  T Q V VNLRN+ C + +F
Sbjct:    2 VVVGIVFRHLSLKPSILKEYAKLGADMIPAPPQRDLVSYVKKPNSDGDAGGQEDSIFLEDESGRILLDFSGLEGEAAEKSKYLVSGMIVAIRGRPEK-LGVLLVRDICRAGLPTRSAPCQEVPICDEDRFVCILSGLNFGNADVNPLAIDLVTEFIKTNL--GDSKFQKWGSTIVRLIVAGKLINASENPDIQN-------------LRELDATLVSIASSIPIDLVPGDGDPTNFLLPQQPINKCLLPSSSRFKTLRRAPNPYEAMIGGRRFLGTGGQNVEDFLRY-----VNDRRDSEGA-----------EKILSVLEEMIRSRHLAPTAPDTLASYPFYESDPFIIDRCPDVFFAGSQPQFGTKVVE-----------------EGDRRVRIISVPDFYRTHQIVLVNLRNLNCELVDF 375          
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A164XZ91 (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164XZ91_DAUCS)

HSP 1 Score: 223 bits (569), Expect = 9.610e-63
Identity = 174/507 (34.32%), Postives = 245/507 (48.32%), Query Frame = 0
Query:    1 MATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGP------DDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQM-ALKRYPEDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEEDEAFQRN---VVSVVIAGNLIPHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVF-------VNLRNMECFVREFG 486
            MA  E     IER+    +S   + F +  +     QY+ IYF RL  +R  L +       P  +       ++ + G    D E VI+G +++ MK KP +L  Y +           R+ TP   P      DD + LEDE+GR  L  + L   P  +VTG +VA+ G E    G F V         PQ+    +  ED Y+  +S L+L + S     ++LL++ + G+  +E E  Q N   +V VVIAG+ +         + LA  D+ R++ P+ + D  L+ +A+++P+  MPG ND +N  +PQQPLHRCL PSSA  + FK   NP +   +G   L TSGQN+ DF     +Y  GS+E                    + LE  L  RHIAPT P+TLG YPF + DPF VES PH++ AGNQ +FGTR                 I G  G  VRLIS+PRF  TG AV        V+ RN +   +E G
Sbjct:    1 MAVMEEEQSDIERKQSLYNSMD-EEFKIQKEMYRGQQYSQIYFARLHLMRTLLYSLV-----PTWKPHLPVCTVLGLEG----DKECVIVGTLYKHMKLKPCVLDEYSKE----------RSVTPLVQPHNFVHSDDYLILEDESGRVKLSGTTLS--PSFYVTGIVVALHGKE-TGAGDFLVEDVLEAGLPPQLDPPNKLGEDKYVVFVSGLNLGSSSSNPLQVQLLVDHITGHLGDEKE--QNNAAQIVQVVIAGDSVEIPRELLNGQNLAPKDQSRLSEPIKEVDILLTQIAASIPLDIMPGPNDPSNFAMPQQPLHRCLFPSSASYNTFKSCTNPHSFELDGVRFLGTSGQNIHDFE----KYSEGSEE-------------------VEFLERTLKWRHIAPTAPNTLGCYPFTDRDPFFVESCPHVYFAGNQNKFGTRL----------------ITGSDGQVVRLISIPRFSKTGTAVMFLPGSVSVDSRNSKLSEKEAG 443          
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A0D2WQ12 (DNA polymerase delta small subunit n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WQ12_CAPO3)

HSP 1 Score: 219 bits (559), Expect = 3.280e-62
Identity = 174/494 (35.22%), Postives = 241/494 (48.79%), Query Frame = 0
Query:    2 ATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDS-FVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPE------DSYICLLSSLSLSTPS---FALELLLEFLKGNTLEE-DEAFQRNVVSVVIAGNLI---PHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMEC 480
            ++ +  +  +ERRA A  ++  +RF +  ++ +E QY+HIYF RL AL+P +   A+D +  P+  L  A   VN             +G ++++M  KPSIL    +   DL+P PP RA   Y   DD I LED +GR  L  +     P S  VTG +VAV G E +S G F V  +    PAPQ AL           D ++ ++S L L        ALELL EFL GN   E ++    +VV VV+AGN +     +E     K +A              D  LS +AST PV  M G  D TN +LPQQPLHRCL P +     F+ VPNP+    +G  ++ TSGQ + D                        KF+   +R+  +LE  L  RH+APT PDTL  +P    DPF++ES+PH++ A NQ EF T  +                 GE G SVRL+ +P F +T   V +NL  +EC
Sbjct:   32 SSSDTANGQLERRAEASYASFNERFQVTQQRLFERQYSHIYFDRLHALKPIVLKRAQDRWTKPAAGLP-APSFVNQLVHLEIGRRCFAVGTLYKEMTLKPSILKEIAE-ERDLVPQPP-RAR--YTSDDDFIVLEDSSGRVRLGGN----FPSSELVTGDVVAVLGTE-QSGGEFVVEEWLMAGPAPQPALDTASRMRGDELDPHVAIVSGLELGKSDQDPLALELLSEFLCGNLGGELNKDLAASVVRVVVAGNSLFNQKELEEASKPKYMARNAVSLGLQTTQQLDSILSNIASTCPVDVMSGPLDPTNHILPQQPLHRCLFPRAYALQTFQTVPNPYHVAVDGVHIMGTSGQPIDDMI----------------------KFQIGDDRLA-LLEHTLQGRHLAPTAPDTLACFPL-NADPFILESSPHVYFAANQPEFATSVLK----------------GEDGQSVRLVLIPTFSTTQTIVLLNLVTLEC 475          
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A7R9Y024 (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y024_9VIRI)

HSP 1 Score: 217 bits (553), Expect = 1.860e-61
Identity = 163/493 (33.06%), Postives = 244/493 (49.49%), Query Frame = 0
Query:    7 GSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPED---SYICLLSSLSLSTPS---FALELLLEFLKGN--TLEEDEAFQRNVVSVVIAGNLIPHVEATPMHKP-----LAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREF 485
            G+  +ER  +A+ SA   RF+LP  ++Y  QYA +YF RL A R  L+AAA         K +    + +  GE     E  I G +F+ MK +P IL  Y +   D   S        Y G DD I LE+E GR  L  SA+++  +  VTG +   +G +  + G F V     + P       R  E+   SYI L+S L + +PS    A  LL++FL G   + EE +   R +  V++AGN +   EA+          +A  +  ++ +P+ + D  L+ LAS VP+  MPGE+D  N  LPQQP+H  L P ++  S ++ V NP+  +  G  ++ TSGQ + D +                      KF     R+ ++LE+ L  RH+APT PD+L SYP+ + DPFVV+ +PH++ AGNQ++F T+ +                       VRL+ VP F +TGQ V VN   +EC + E+
Sbjct:   26 GAAQLER--VALPSATNGRFVLPTPRQYSRQYAQVYFSRLMAQRAPLEAAANAAGWQSHAKKKRVVDLASAIGE-----ECYITGTLFKNMKLQPRILDEYLK---DGGLSTGAAKPDSYVGDDDTIVLEEETGRVALVGSAVET--ERLVTGVVATARG-KVNAKGEFVVE--EMLFPGVPKQKPRPMEEGEASYIALVSGLGVGSPSSNPLAASLLVDFLTGQLGSAEEQKLCSR-IARVIVAGNSLCVPEASAQGSGRGGGGMAAREAAKLGAPLAELDLLLAELASAVPIDLMPGESDPANVALPQQPMHSALFPRASTYSTYRPVTNPYTADVGGVSIVGTSGQALDDLS----------------------KFTKGVSRL-ELLEATLRWRHLAPTAPDSLASYPYSDEDPFVVQDSPHVYFAGNQRQFDTKLVE---------------------GVRLVCVPDFATTGQIVLVNTHTLECRLMEW 458          
BLAST of Ggra11076.t1 vs. uniprot
Match: DNA polymerase delta subunit 2-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0A15A (DNA polymerase delta subunit 2-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0A15A)

HSP 1 Score: 216 bits (551), Expect = 3.390e-61
Identity = 160/459 (34.86%), Postives = 220/459 (47.93%), Query Frame = 0
Query:   32 KRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAE-DRSTGTFKVSGFSSILPAPQMALKRYPEDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEE-DEAFQRNVVSVVIAGNLIPHV----EATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMEC 480
            + +  QYAH+Y  RL  +RP L AAA+D +G   +        V    E   D + V+IG +F+ M+ KPSIL    +  H+L+P P     + Y    D + LEDE  R  L  +      D+ VTG I+AV G E +   G F V  ++  L   Q+   +  +DSY+ LLS L +   S   F L++ ++ + G   +E  +    N+V V++AGN +       E+    K L           M   D  ++ LAS V V  +PG  D TN +LPQQPLHRC+ P S+       V NP   + EG  LL TSGQ + D   Y    D                         DILE  L   H+APT PDTLG YPFY  DPF++   PH++ AGN KE+GT+    P             DG+    V L+S+PRF  T  AV VNLR++EC
Sbjct:   44 RNFGRQYAHLYAERLLTMRPKLTAAAKDKWGADIK--------VRKLHELKSDEKCVVIGTLFKHMELKPSILKEISE-EHNLMPQP---VRSRYTDEADKLLLEDELQRIYLLGNMK---VDTSVTGVILAVYGVEPEDDKGKFHVEDWTFQLLPSQVDRPKLTKDSYVALLSGLDIGGKSEKLFQLQMFVDLVTGQLGDEGQQEASANIVRVILAGNSLSGTLQDKESLNKAKYLTKKTTAGTVEAMKSLDDIVTQLASCVDVDILPGATDPTNHVLPQQPLHRCMFPQSSAYPTMNTVTNPLDLSVEGVRLLGTSGQPIQDIWRYSTLEDN-----------------------LDILEKTLVWGHLAPTAPDTLGCYPFYSEDPFIITHCPHVYFAGNCKEYGTKMFKGP-------------DGQ---EVVLVSIPRFSQTSTAVLVNLRSLEC 448          
BLAST of Ggra11076.t1 vs. uniprot
Match: A0A6P6SQU7 (DNA polymerase delta small subunit isoform X1 n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6SQU7_COFAR)

HSP 1 Score: 215 bits (547), Expect = 6.740e-61
Identity = 161/491 (32.79%), Postives = 235/491 (47.86%), Query Frame = 0
Query:    2 ATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALRPALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMK-KPSILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDSIPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSI-LPAPQMALKRYPEDSYICLLSSLSLSTPS---FALELLLEFLKGNTLEEDE-AFQRNVVSVVIAGNLIPHVEATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLLPQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQAQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLGSYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDGELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREFG 486
            ++ ENG   +  R  A+ S+    F +  +     QY+ IYF RL  +R  L +    N+ P          +  V G   +  E +I+G +++ MK KPSIL  Y +       + PL     +  PDD + LEDE+GR  +    L  +P  +VTG +VA+ G E   TG F V       +P       +  ED Y+  +S L + + +      +LL++ + G+  ++ E +    +V V+IAGN +         + L   D+  ++ P+ + D  L+ +A+ +PV  MPG ND  N  LPQQPLHRCL PSS+  + F+  PNP     +   LL TSGQN+ D   Y    D                         + LE  L  RH+APT P+TLG YPF + DPF VE+ PH++  GNQ+++ TR                 I G  G  VRLI +PRF  TG AV +NLRN+EC    FG
Sbjct:    6 SSSENG---LLHRKQALYSSLDSCFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLL-PNWKPHIH-------VCTVIGLE-EGKECIIVGTLYKHMKLKPSILEEYSKERS----ATPLVRPHNFMHPDDHLILEDESGRIKVCGDVL--LPSVYVTGVVVALHGKE-TGTGDFWVEDVMEAGIPHQIERPIKSGEDKYVIFVSGLDIGSSTSNPLKFQLLVDHITGHLGDKKEQSIAAKIVRVIIAGNSVEIPRGLLNGQNLGSKDQFTLSEPIKELDIQLTQIAAGIPVDIMPGPNDPANFSLPQQPLHRCLFPSSSAYNTFRSCPNPHLFQLDDVSLLGTSGQNIDDLEKYSDANDK-----------------------LEFLERTLRWRHVAPTAPNTLGCYPFTDRDPFFVETCPHVYFVGNQEKYETRL----------------IKGAEGQIVRLICIPRFSETGVAVVLNLRNLECHALSFG 438          
The following BLAST results are available for this feature:
BLAST of Ggra11076.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3312.220e-23367.62DNA polymerase delta small subunit n=1 Tax=Gracila... [more]
R7Q5121.500e-16152.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X3864.750e-7535.91DNA polymerase delta subunit 2 n=1 Tax=Galdieria s... [more]
DNA polymerase delta small subunit n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F003C61.810e-7035.20DNA polymerase delta small subunit n=1 Tax=Daucus ... [more]
A0A7S1XHK75.350e-6635.70Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A164XZ919.610e-6334.32Uncharacterized protein n=1 Tax=Daucus carota subs... [more]
A0A0D2WQ123.280e-6235.22DNA polymerase delta small subunit n=1 Tax=Capsasp... [more]
A0A7R9Y0241.860e-6133.06Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
DNA polymerase delta subunit 2-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0A15A3.390e-6134.86DNA polymerase delta subunit 2-like n=2 Tax=Haliot... [more]
A0A6P6SQU76.740e-6132.79DNA polymerase delta small subunit isoform X1 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.50coord: 168..488
e-value: 6.1E-83
score: 280.3
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 200..428
e-value: 3.6E-34
score: 118.0
IPR040663DNA polymerase delta subunit, OB-fold domainPFAMPF18018DNA_pol_D_Ncoord: 37..177
e-value: 5.8E-23
score: 81.4
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 9..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:58192..59661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11076.t1Ggra11076.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 58192..59661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11076.t1 ID=Ggra11076.t1|Name=Ggra11076.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=490bp
MATGENGSHTIERRAIAIDSAPAKRFLLPPKKRYEPQYAHIYFCRLTALR
PALQAAAEDNFGPPSEKLRYAKRIVNVSGESMQDIESVIIGVVFRQMKKP
SILALYEQPSHDLIPSPPLRASTPYPGPDDVIFLEDENGRCTLDASALDS
IPDSFVTGFIVAVKGAEDRSTGTFKVSGFSSILPAPQMALKRYPEDSYIC
LLSSLSLSTPSFALELLLEFLKGNTLEEDEAFQRNVVSVVIAGNLIPHVE
ATPMHKPLAVGDKERIASPMVDADRFLSGLASTVPVFHMPGENDATNCLL
PQQPLHRCLLPSSARNSNFKRVPNPFACNFEGRLLLATSGQNVSDFALYQ
AQYDTGSKEETLGSKEKEKKFEPSGERVTDILESMLNNRHIAPTCPDTLG
SYPFYEMDPFVVESTPHIFVAGNQKEFGTRTMNVPRETSQESSEEMNIDG
ELGGSVRLISVPRFDSTGQAVFVNLRNMECFVREFGGAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR040663DNA_pol_D_N
IPR024826DNA_pol_delta/II_ssu