Ggra11073.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11073.t1
Unique NameGgra11073.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length235
Homology
BLAST of Ggra11073.t1 vs. uniprot
Match: A0A2V3J469 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J469_9FLOR)

HSP 1 Score: 344 bits (883), Expect = 8.070e-118
Identity = 150/228 (65.79%), Postives = 189/228 (82.89%), Query Frame = 0
Query:    1 MNVVHDHPNTAFRCSEDHDAWIELYYSRHSWKVSQISFKKDSDAWVPFGKFKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYVIESPGRYVVESGNGCRRVSDAQIADCLRAQRPNDTYIELMFNSNPIWRNCYVTFCMPGEETLEWHKQQMELMEDTGLWFLRFEAKDGMNCAFTDGNAEWDSNINLNYQIRLPGRYALGQGNISYLGPSALDMHM 228
            M   HDHPNTAFR ++D+D+W+E+++SR SW++SQISFKKDS++WVPF +FKLIDASD++ GF+ FRI   RLEFKFAN   T+I++N G+NYVIESPGRYVV +G+GCRRVSDAQIADCLR  RP+D Y+EL+F +NP WRNC+ TFCM GE  L+WHKQ MEL  + G+WFLR EAK G+ CAFTDG +EWDSN NLNYQI+LPG+Y +G+ +I YLG S LD+H+
Sbjct:    1 MITAHDHPNTAFRGNKDYDSWVEVFHSRSSWRMSQISFKKDSESWVPFNRFKLIDASDVRPGFRVFRIRATRLEFKFANGKRTDIEDNSGKNYVIESPGRYVVVTGSGCRRVSDAQIADCLRPMRPHDKYVELLFEANPTWRNCFATFCMEGEHDLDWHKQPMELRSEPGVWFLRIEAKHGVKCAFTDGGSEWDSNSNLNYQIKLPGKYLIGKRHIVYLGVSDLDIHL 228          
BLAST of Ggra11073.t1 vs. uniprot
Match: A0A7S3EKX2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKX2_9RHOD)

HSP 1 Score: 162 bits (410), Expect = 2.900e-46
Identity = 88/216 (40.74%), Postives = 122/216 (56.48%), Query Frame = 0
Query:   12 FRCSEDHDAWIELYYSRHSWKVSQISFKKDSDAWVPFGKFKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYVIESPGRYVVESGNGCRRVSDAQIADCLRAQRPNDTYIELMFNSNPIWRNCYVTFCMPGEETLEWHKQQMELME--DTGLWFLRFEAKDGMNCAFTDGNAEWDSNINLNYQIRLPGRYALGQGNISYLGPSALD 225
            FR +     WIE+++S  SW    I F+KD   W    +++L DASDIK GF+ FR+    LEF   N +    +NN G+NY IE  GRY+V S     RV DA +  CLRA R ND +IEL++   P W  C + +    +  LE   + M  ++  D  L+ LR EA+  M  AF DG  EWDSN++ NY++ LPG+Y +  G   Y+GPS +D
Sbjct:    6 FRGTPFASGWIEIFHSMPSWDRCFIVFRKDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLV-SYKSMSRVGDADVGSCLRAMRKNDRFIELIYQPPPSWLGCSIIYSKDDDPWLEAPGEAMTRIKSKDPQLFMLRTEAQH-MTFAFFDGVEEWDSNMDENYKVGLPGKYFVRDGVCKYIGPSEMD 219          
BLAST of Ggra11073.t1 vs. uniprot
Match: A0A7S0BE94 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BE94_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 6.510e-27
Identity = 55/137 (40.15%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   21 WIELYYSRHSWKVSQISFKKDSDAWVPFGKFKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYVIESPGRYVVESGNGCRRVSDAQIADCLRAQRPNDTYIELMFNSNPIWRNCYVTFCMPGEETLE 157
            WIE+++S  SW    I F+KD   W    +++L DASDIK GF+ FR+    LEF   N +    +NN G+NY++E  GRY+V S     RV DA I  C+RA R +D +IEL++     W  C + +    E  LE
Sbjct:   15 WIEIFHSMPSWDRCFIVFRKDGKEWKKNARYELRDASDIKPGFRVFRVKAWTLEFYLTNGSSRNWENNSGKNYLVEESGRYLV-SYKSMSRVGDADIGSCIRAMRRHDRFIELIYQPPSSWLGCSIIYSKDNEPWLE 150          
BLAST of Ggra11073.t1 vs. uniprot
Match: A0A7S1TAT7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TAT7_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 4.870e-23
Identity = 63/214 (29.44%), Postives = 100/214 (46.73%), Query Frame = 0
Query:   19 DAWIELYYSRHSWKVSQISFKKDSDAWVPFGKFKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYV-IESPGRYVVESGNGCRRVSDAQIADCLRAQRPNDTYIELMFNSNPIWRNCYVTFCMPGEETLEWHKQQMELME--DTGLWFLRFEAKDGMNCAFTDGNAEWDSNINLNYQ-IRLPGRYALGQGNISYLGPSALDMHM 228
            + WIE +     W  S + ++ D++     G         +  G   FR+  + L F  +  +  E         V +   GRY     +   R+SDA + DCLR+ RP D ++EL + S+PIW +C+V F   G  T  W +Q    M     GLWF+R   +  M  AF DG +  +S  +  +  I +PG+Y +      ++GPS LD+H+
Sbjct:   36 EGWIESFQDAKDWTSSVVRYEVDNEGCWREGMMH-----GVGEGVHVFRVRARHLRFTLSQGSSKEKTRGCSAEAVTVSRSGRYFFRGSSLPERISDACVDDCLRSLRPKDRFVELFYESDPIWLHCFVMFTRDGGST--WKEQPGSPMRRVQPGLWFVRLSFRP-MEIAFHDGRSLHNSTPSQKFCCIGVPGKYRVSNHRCRWIGPSDLDLHI 241          
BLAST of Ggra11073.t1 vs. uniprot
Match: A0A7S3A1A4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A1A4_9RHOD)

HSP 1 Score: 99.4 bits (246), Expect = 5.860e-23
Identity = 52/119 (43.70%), Postives = 67/119 (56.30%), Query Frame = 0
Query:   12 FRCSEDHDAWIELYYSRHSWKVSQISFKKDSDAWVPFGKFKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYVIESPGRYVVESGNGCRRVSDAQIADCLRAQRPNDTY 130
            FR +     WIE+++S  SW    I F+KD   W    +++L DASDIK GF+ FR+    LEF   N +    +NN G+NY IE  GRY+V S     RV DA +  CLRA R ND Y
Sbjct:    6 FRGTPFASGWIEIFHSMPSWDRCFIVFRKDGKEWKKNARYELRDASDIKPGFRVFRVKALTLEFYLTNGSSRNWENNSGKNYFIEESGRYLV-SYKSMSRVGDADVGSCLRAMRKNDRY 123          
The following BLAST results are available for this feature:
BLAST of Ggra11073.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J4698.070e-11865.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S3EKX22.900e-4640.74Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BE946.510e-2740.15Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S1TAT74.870e-2329.44Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S3A1A45.860e-2343.70Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 18..115
e-value: 1.5E-6
score: 30.4
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 122..221
e-value: 4.3E-12
score: 48.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:50374..51164 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11073.t1Ggra11073.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 50374..51164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11073.t1 ID=Ggra11073.t1|Name=Ggra11073.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=235bp
MNVVHDHPNTAFRCSEDHDAWIELYYSRHSWKVSQISFKKDSDAWVPFGK
FKLIDASDIKTGFKTFRIIGKRLEFKFANNNETEIDNNIGRNYVIESPGR
YVVESGNGCRRVSDAQIADCLRAQRPNDTYIELMFNSNPIWRNCYVTFCM
PGEETLEWHKQQMELMEDTGLWFLRFEAKDGMNCAFTDGNAEWDSNINLN
YQIRLPGRYALGQGNISYLGPSALDMHMQTYIER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold