Ggra11071.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11071.t1
Unique NameGgra11071.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length154
Homology
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A2V3J321 (30S ribosomal protein S17, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J321_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 4.470e-104
Identity = 147/152 (96.71%), Postives = 150/152 (98.68%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTG 152
            MADILHDKSFPKQGAVSLVGRT RKQGRW++NVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKM+KTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTA AEDGKKMFTG
Sbjct:    1 MADILHDKSFPKQGAVSLVGRTGRKQGRWFRNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMRKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAAAEDGKKMFTG 152          
BLAST of Ggra11071.t1 vs. uniprot
Match: R7Q4Z1 (30S ribosomal protein S17, chloroplastic n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Z1_CHOCR)

HSP 1 Score: 282 bits (722), Expect = 5.410e-96
Identity = 131/152 (86.18%), Postives = 144/152 (94.74%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTG 152
            MADILH+K+FPKQGAVSLVGR  RK GRW++NVGLGIKTPREAIEGTY+DKKCPFTGNVSIRGRLFRGV++STKMKKTVI+R+DYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQ RP SKTKRFAVLK++R AP+ DGKK+F G
Sbjct:    1 MADILHEKAFPKQGAVSLVGRVGRKNGRWFRNVGLGIKTPREAIEGTYVDKKCPFTGNVSIRGRLFRGVVVSTKMKKTVIVRRDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQNRPTSKTKRFAVLKLDRAAPSADGKKIFAG 152          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A5J4YKR3 (30S ribosomal protein S17, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKR3_PORPP)

HSP 1 Score: 241 bits (616), Expect = 7.780e-80
Identity = 112/152 (73.68%), Postives = 130/152 (85.53%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTG 152
            MADI  +K+F KQ AVSL G+  R +GRWYKNVGLGIKTP EAI G ++DKKCPFTGNVS+RG L RGV+ISTKMK+T++IR+DYLHW++KYKRFEKRHRN+PAH SP FR+REGDQVTIGQ RPLSKT  F VLKI+R AP  DGKK+FTG
Sbjct:    1 MADIQTEKAFQKQEAVSLAGKVGRTKGRWYKNVGLGIKTPSEAINGDFVDKKCPFTGNVSVRGTLMRGVVISTKMKRTIVIRRDYLHWVKKYKRFEKRHRNVPAHCSPAFRIREGDQVTIGQCRPLSKTVSFNVLKIDRIAPDADGKKVFTG 152          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A7S1TM77 (30S ribosomal protein S17, chloroplastic n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TM77_9RHOD)

HSP 1 Score: 241 bits (614), Expect = 1.570e-79
Identity = 111/152 (73.03%), Postives = 131/152 (86.18%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTG 152
            MADI  +K+F KQ AVSLVG+  +++GRWYKN+GLGIKTP EAI G Y+DKKCPFTGNVSIRG + RGV+ISTKMK+T++IR+DYLHW+RKYKRFEKRHRNIPAH SP FR+REGDQVTIGQ RPL+KT  F VLKI+R AP   GKK+F+G
Sbjct:    1 MADIQTEKAFQKQDAVSLVGKVGQRKGRWYKNIGLGIKTPNEAIVGDYVDKKCPFTGNVSIRGSILRGVVISTKMKRTIVIRRDYLHWVRKYKRFEKRHRNIPAHCSPAFRVREGDQVTIGQCRPLAKTVSFNVLKIDRVAPESSGKKVFSG 152          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A1X6NLK9 (30S ribosomal protein S17, chloroplastic n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLK9_PORUM)

HSP 1 Score: 240 bits (613), Expect = 2.230e-79
Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTG 152
            MAD  H+K+F KQGAVSL G  S+K+ RWYK+VGLGIKTP EAI+G Y+DKKCPFTG+VSIRGRLFRGVI+STKM++TV+IR++YLHWI+KYKRFEKRHRN+PAH SPCFR++EGDQVTIGQ RPLSKT RF VLKI+R A   + KK F+G
Sbjct:    1 MADFQHEKAFQKQGAVSLNGGVSKKKDRWYKSVGLGIKTPAEAIDGDYVDKKCPFTGDVSIRGRLFRGVIVSTKMRRTVVIRREYLHWIKKYKRFEKRHRNMPAHCSPCFRVKEGDQVTIGQCRPLSKTVRFNVLKIDRIAAVVESKKAFSG 152          
BLAST of Ggra11071.t1 vs. uniprot
Match: M2XRC2 (30S ribosomal protein S17, chloroplastic n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRC2_GALSU)

HSP 1 Score: 226 bits (577), Expect = 7.520e-74
Identity = 107/154 (69.48%), Postives = 130/154 (84.42%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSL--VGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPA-EDGKKMFT 151
            MAD   +++F KQ A+SL  +   S+K  RWYKN+GLGIKTP+EAIEG YIDKKCPFTGNVSIRGR+ RG ++STKMK+TVI+R+DYLHW+ KYKRFEKRHRNIPAH SPCFR+REGD VTIG+ RPLSKT RF +L+I+R APA E GKK+++
Sbjct:    1 MADPQTERAFQKQDAISLKQIAGVSKKNARWYKNIGLGIKTPKEAIEGDYIDKKCPFTGNVSIRGRILRGTVVSTKMKRTVIVRRDYLHWVSKYKRFEKRHRNIPAHCSPCFRVREGDLVTIGECRPLSKTVRFNILRIDRAAPASEAGKKIYS 154          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A7J7INF0 (30S ribosomal protein S17, chloroplastic n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7INF0_9RHOD)

HSP 1 Score: 219 bits (559), Expect = 4.430e-71
Identity = 106/157 (67.52%), Postives = 128/157 (81.53%), Query Frame = 0
Query:    1 MADILHDKSFPKQGAVSLVGRTSRKQG---RWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAED--GKKMFTG 152
            M ++  +++F KQ AVSL G   R  G   RWYK++GLGIKTPREAIEGTYIDKKCPFT NVSIRGR+ RGV++STKM +TVI+R+DYLHW+ KY+R+E+RHRNIP HASPCFRL EGD VTIGQ RPLSKT RF V++++R A  +D  GKKMFTG
Sbjct:    1 MTEVQTERAFQKQEAVSLNGPAVRFHGARKRWYKSIGLGIKTPREAIEGTYIDKKCPFTSNVSIRGRVLRGVVVSTKMTRTVIVRRDYLHWVPKYRRYERRHRNIPCHASPCFRLHEGDIVTIGQCRPLSKTVRFNVIRVDRAAGGKDKAGKKMFTG 157          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A7S3KK56 (Hypothetical protein n=2 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KK56_EUPCR)

HSP 1 Score: 196 bits (499), Expect = 7.800e-62
Identity = 91/152 (59.87%), Postives = 121/152 (79.61%), Query Frame = 0
Query:    6 HDKSFPKQGAVSL----VGRTSRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMFTGF 153
            H+K+F KQ A+ +    +G+T +++ R+Y++VGLG KTP EAIEGTY+DKKCPFTGNVSIRGR+  GV+ STKMK+T+++R+DYLH++ KY R+EKRH+NI AH SPCFR+ +GD VT+GQ RPLSKT RF V++I+R A    GKK F  F
Sbjct:   18 HEKAFQKQDAIFVNAKTLGKTKKRESRYYRSVGLGFKTPLEAIEGTYVDKKCPFTGNVSIRGRILTGVVASTKMKRTIVVRRDYLHYVNKYHRYEKRHKNISAHCSPCFRVEQGDIVTVGQCRPLSKTVRFNVVRIDRKA---GGKKQFQKF 166          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A2D4CKZ9 (40S ribosomal protein S11 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CKZ9_PYTIN)

HSP 1 Score: 192 bits (487), Expect = 4.440e-60
Identity = 87/147 (59.18%), Postives = 118/147 (80.27%), Query Frame = 0
Query:    4 ILHDKSFPKQGAVSLVGRT---SRKQGRWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGK 147
            ++++++F KQ AV L  +     + Q RWYK++GLG KTP+ AIEG Y+DKKCPFTG++SIRGR+ +GV++STKMK+T+I+R+DYLH++RKYKRFEKRH+N+ AH SPCFR++EGD VTIGQ RPL+KT RF VL +    PA + K
Sbjct:    7 VMNERAFQKQDAVFLASKKFAGKKSQPRWYKDIGLGFKTPKTAIEGHYVDKKCPFTGDISIRGRILKGVVLSTKMKRTIIVRRDYLHFVRKYKRFEKRHKNVAAHVSPCFRVKEGDVVTIGQCRPLAKTVRFNVLDVE---PASETK 150          
BLAST of Ggra11071.t1 vs. uniprot
Match: A0A022QWU9 (Ribosomal_S17_N domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QWU9_ERYGU)

HSP 1 Score: 191 bits (486), Expect = 6.100e-60
Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 0
Query:    7 DKSFPKQGAVSLV------GRTSRKQG-RWYKNVGLGIKTPREAIEGTYIDKKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHRNIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAED-GKKMFTGF 153
            +K+F KQ  V L       G+T  K G R++KN+GL  KTPREAIEGTYIDKKCPFTGNVSIRGR+  G   S KM +T+I+RKDY HW++KY+R+EKRH NIPAH SPCFR++EGD+VTIGQ RPLSKT RF VLK++    +   GKK FTGF
Sbjct:    6 EKAFLKQPKVFLCSKKSGKGKTPGKGGNRYWKNIGLIYKTPREAIEGTYIDKKCPFTGNVSIRGRIISGTCHSAKMMRTIIVRKDYFHWVKKYQRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVSPAGSSSALGKKSFTGF 160          
The following BLAST results are available for this feature:
BLAST of Ggra11071.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3214.470e-10496.7130S ribosomal protein S17, chloroplastic n=1 Tax=G... [more]
R7Q4Z15.410e-9686.1830S ribosomal protein S17, chloroplastic n=1 Tax=C... [more]
A0A5J4YKR37.780e-8073.6830S ribosomal protein S17, chloroplastic n=1 Tax=P... [more]
A0A7S1TM771.570e-7973.0330S ribosomal protein S17, chloroplastic n=1 Tax=E... [more]
A0A1X6NLK92.230e-7973.6830S ribosomal protein S17, chloroplastic n=1 Tax=P... [more]
M2XRC27.520e-7469.4830S ribosomal protein S17, chloroplastic n=1 Tax=G... [more]
A0A7J7INF04.430e-7167.5230S ribosomal protein S17, chloroplastic n=2 Tax=C... [more]
A0A7S3KK567.800e-6259.87Hypothetical protein n=2 Tax=Euplotes crassus TaxI... [more]
A0A2D4CKZ94.440e-6059.1840S ribosomal protein S11 n=2 Tax=Pythium insidios... [more]
A0A022QWU96.100e-6062.58Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 115..125
score: 60.73
coord: 125..132
score: 79.5
coord: 82..105
score: 34.17
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 68..136
e-value: 2.1E-27
score: 95.0
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 7..152
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 6..66
e-value: 7.5E-26
score: 90.3
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..151
e-value: 5.8E-68
score: 229.7
NoneNo IPR availablePANTHERPTHR10744:SF940S RIBOSOMAL PROTEIN S11coord: 7..152
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 34..137
e-value: 5.9E-34
score: 114.1
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 115..127
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 62..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:47318..47779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11071.t1Ggra11071.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 47318..47779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11071.t1 ID=Ggra11071.t1|Name=Ggra11071.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=154bp
MADILHDKSFPKQGAVSLVGRTSRKQGRWYKNVGLGIKTPREAIEGTYID
KKCPFTGNVSIRGRLFRGVIISTKMKKTVIIRKDYLHWIRKYKRFEKRHR
NIPAHASPCFRLREGDQVTIGQTRPLSKTKRFAVLKINRTAPAEDGKKMF
TGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR032440Ribosomal_S11_N
IPR028333Ribosomal_S17_arc-typ
IPR019979Ribosomal_S17_CS
IPR012340NA-bd_OB-fold