Ggra11067.t1 (polypeptide) Gracilaria gracilis GNS1m male
|
Overview
Homology
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3J5W6 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR) HSP 1 Score: 355 bits (912), Expect = 3.800e-113 Identity = 333/559 (59.57%), Postives = 385/559 (68.87%), Query Frame = 0
Query: 5 LLVLFTLWGSLTVSFAVPTVIRQD-ANTDTCPIDGVCFALDQSGSIFTNYPILQAFVAAVAREVESNSPQTLFSAFGFATSFNTIQTSTSEVEGAFVPAVNAPVTPAGTTNMFAGLNACFNELTDLTGNRVIVLITDGVDNGTPFAIQLAPTVKEQGIVIITVGIGAGVSSLYLQQVATSPDFFIASAFTALPVEVFSLTQMMCELPAVSPVP--TDDDFSEPEISATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLFASXXXXXXXXXXXXXXVDVPETPTPEIPXXXXXXXXXXXXXXXXPPITPPVVDACEMAFQECGFTFVGTATVPTFALPSTPDVPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDATIDDNACVVFRT 560
LL+ L++S AVPTV+RQD ++ +TCPID VCFA+DQSGSIF NY +Q FV VARE+ES S TLFSA+GF+ S TIQTSTS++E FVPAV A P+G+TNM+AGLN CFN++ D GN+VI+L+TDG DN P A LAP +K+ GI I+TVGIGAGVS+ YL+Q+A++PDFFI F+ LP EV SL+QM C+ SP P T ++ EP ++ T XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXX XXXXXXXXXXXXXXXXXXX XXXXXXXXXX PP +DACE A+Q+C F F T VPTF L PD PFTPRI+SR P + +GV+NTN I+P FIE DGSV IT T A FAPTQFKP SIP D GS +G+QTFQ NQ +RCVR+FF+SFQLL PFSVI N++A DN CVVFRT
Sbjct: 3 LLIFLAFSAFLSLSIAVPTVVRQDDSSEETCPIDSVCFAMDQSGSIFLNYGAIQNFVIEVAREIESRSFGTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQLMFSTLPSEVVSLSQMTCDAVDASPEPSETPEETMEPFVTETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFXXXXXXXXXXXXXXLVSESPEPSMTXXXXXXXXXXXXXXXXXXXXXXXXXVIESPIXXXXXXXXXXXVPSEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------------------PPTLDACEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITS-TPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRT 524
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IFK7 (Collagen alpha-6(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK7_9FLOR) HSP 1 Score: 196 bits (498), Expect = 9.350e-54 Identity = 103/202 (50.99%), Postives = 139/202 (68.81%), Query Frame = 0
Query: 20 AVPTVIRQDANT----DTCPIDGVCFALDQSGSIFTN-YPILQAFVAAVAREVESNSPQTLFSAFGFATSFNTIQTSTSEVEGAFVPAVNAPVTPAGTTNMFAGLNACFNELTDLTGNRVIVLITDGVDNGTPFAIQLAPTVKEQGIVIITVGIGAGVSSLYLQQVATSPDFFIASAFTALPVEVFSLTQMMCELPAVSPVP 216
++P I QD T + C I+ VCF LD+SGSI ++ Y + Q FV +V+R + S + TL+SA+GFA+S + IQ STS +EG FVP +N G+TNM+AGLNACFNE+ GNRVIVLITDG DNG P A LAPTVK G+ I+T+G+G+GV YL+ +AT+P FFI S F++LP +V + + C++ VSPVP
Sbjct: 19 SIPFSIHQDLPTNDTSEDCSINSVCFVLDESGSIQSSEYIVEQQFVISVSRVISSRTNGTLYSAYGFASSASVIQASTSNLEGTFVPVINQSQQSGGSTNMYAGLNACFNEVNGNAGNRVIVLITDGGDNGNPLAEALAPTVKAAGVAIVTIGVGSGVDEDYLRSLATTPAFFIPSTFSSLPADVVRVAESSCDVVEVSPVP 220
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IP66 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR) HSP 1 Score: 155 bits (391), Expect = 6.200e-37 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 0
Query: 404 PITPPVVDACEMAFQECGFTFVGTATVPTFALPSTPDVPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDATIDDNACVVFRT 560
P PVVD C+ A+ CGF F VP F++ +V F+P I SRN N N+GV+N+N++ E DG+ V IT A+Q F+ TQFKPFS+ GS IGH+TFQA+Q VI RCVRVFFS FQLL PF+V+GNV A +DN CVVF+T
Sbjct: 446 PTPEPVVDKCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITS-LPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKT 601
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IGK2 (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR) HSP 1 Score: 130 bits (327), Expect = 7.680e-30 Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 0
Query: 413 CEMAFQECGFTFVGTATVPTFALPSTPDVPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDATIDDNACVVFRT 560
C AF EC FTF G + TF++ PD FTPRI+S++ ++ +GV+N+N+IVP FIE +G V IT+ +Q F PT FKP+++ GS IGHQTF NQ V DRC+RV+F+ FQ + + +I D +N CVVFRT
Sbjct: 211 CSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNG-VFPITNF--GSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNK---LINRNDVPRSENKCVVFRT 352
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IQI6 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR) HSP 1 Score: 108 bits (271), Expect = 2.940e-22 Identity = 62/155 (40.00%), Postives = 87/155 (56.13%), Query Frame = 0
Query: 408 PVVDACEMAFQECGFTFVGTATVPT--FALPSTPDVPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDATIDDNACVVFRT 560
P CE A+ +C F F G F++ PD FTPR++ + ++G +NTN++VP FIE + IT+ +Q F PT FKP+ I + GS +GHQTFQ NQ V D+CVRV+F+SFQ + V+ + +N CVVFRT
Sbjct: 209 PEKTECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGR-PITEF--GSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQ--VVNRNNVPTSENKCVVFRT 358
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IGH1 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR) HSP 1 Score: 107 bits (266), Expect = 1.360e-21 Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query: 413 CEMAFQECGFTFVGTATVPT--FALPSTPDVPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDATIDDNACVVFRT 560
CE A+ +C F F G F++ PD TP+++ + ++G +NTN++VP FIE + V IT+ +Q F PT FKP+ I + GS +GHQTFQ NQ + D+CVR++F+SFQ +S + V+ + ++ CVVFRT
Sbjct: 215 CEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIE-ENQVSLITEF--GSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEIS--QNGQVVNRNNVPTSEHKCVVFRT 359
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A2V3IEB5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEB5_9FLOR) HSP 1 Score: 98.6 bits (244), Expect = 2.490e-20 Identity = 66/160 (41.25%), Postives = 88/160 (55.00%), Query Frame = 0
Query: 407 PPVVDACEMAFQECGFTFVGTATVPTFALPSTPD-VPFTPRIISRNPNINIGVVNTNDIVPGFIEPDGSVVAITDETDATQPFAPTQFKPFSIPGDNGSAIGHQTFQANQAFVIADRCVRVFFSSFQLLSTEEPFSVIGNVDAT----IDDNACVVFRTA 561
PP D C F +C F G A + TF L +T D V FTP I+ P IG+VN+N ++P FIE S + T+ T PTQFKPF+I S +GH+TFQ + V RCVRV+F+S Q+L + V+ N T + +N CVVFRT+
Sbjct: 23 PP--DFCVSFFDDCVLRFAGQAALATFPLAATVDNVAFTPAIVF--PGEQIGIVNSNGVIPQFIESKPSGITATNVT--AFGLTPTQFKPFTIVNTTTSGVGHETFQGAVS-VAQRRCVRVYFTSGQIL---QGGVVVDNAQFTPEEAVAENVCVVFRTS 172
BLAST of Ggra11067.t1 vs. uniprot
Match: Q7XZ43 (Alpha 1 type VII collagen (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ43_GRIJA) HSP 1 Score: 72.0 bits (175), Expect = 7.280e-11 Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 0
Query: 34 CPIDGVCFALDQSGSIF-TNYPILQAFVAAVAREVESNSPQTLFSAFGFATSFN------TIQTSTSEVEGAFVPAVNAPVTPAGTTNMFAGLNACFNELTDLTGNRVIVLITDGVDNGTPFAIQLAPTVKEQGIVIITVGIGAGVSSLYLQQ-VATSPDFF 187
CP +C+A+D+S SI T + L A + + + +P + F+A F+ N + TS+V F+ A+ A G T+ GLN C EL +VI+LITDGVDN P + + +K G + VGIG ++ L+ +++SPD +
Sbjct: 25 CPPAKICYAIDESESISGTEFAQLNAALVEITNTFSTAAPGSSFAAVDFSGLQNGGGVGEVVSPLTSDVT-TFLAALAANPKRGGFTSSGTGLNLCDQELDGQAQPKVILLITDGVDNRNPIGVDVEAAIKANGNTVAVVGIGDNLNDDDLRDTISSSPDLY 185
BLAST of Ggra11067.t1 vs. uniprot
Match: A0A7S1XH88 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH88_9RHOD) HSP 1 Score: 74.3 bits (181), Expect = 1.020e-10 Identity = 58/185 (31.35%), Postives = 91/185 (49.19%), Query Frame = 0
Query: 34 CPIDGVCFALDQSGSIF-TNYPILQAFVAAVAREVESNSPQ----TLFSAFGFATSFNTIQTSTSEVEGAFVPAVNAPVTPAGTTNMFAGLNACFNELTDLTGNRVIVLITDGVDNGTPFAIQLAPTVKE-QGIVIITVGIG-AGVSSLYLQQVATSPDFFIASA-FTALPVEVFSLTQMMCELP 210
CPI+ +CFA+D+SGSI T + V VA +ES S T + A GF++S N + T+ F V++ G T+ L C N + G RVIVL+TDG + A A +K ++T+G+G ++ L+ +A+ P+FF+ S F+ L + + Q +C P
Sbjct: 23 CPINSICFAIDESGSISGTQFIAENTAVKNVADSIESISISLGISTTYGAVGFSSSANVVSPLTNLAT--FKGNVDSNPKSGGGTSYGPALQQCRNLIGPQAGVRVIVLVTDGQPSDPAAATSEANIIKSLPNTFLVTIGVGLTSTATTLLRDLASGPEFFVGSTDFSTLTTQTGKILQAICPPP 205 The following BLAST results are available for this feature:
BLAST of Ggra11067.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 9
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra11067.t1 ID=Ggra11067.t1|Name=Ggra11067.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=562bpback to top |