Ggra11066.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11066.t1
Unique NameGgra11066.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1054
Homology
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A2V3J326 (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J326_9FLOR)

HSP 1 Score: 946 bits (2446), Expect = 0.000e+0
Identity = 841/1057 (79.56%), Postives = 908/1057 (85.90%), Query Frame = 0
Query:    5 PPASSQSPSALYYCYVARSC----FVPPVMPNRAQHVALSSQCNAAVTRALGPHGNRTFVNGYSNLFFRSDSIWSPSFDSHRGDPVGNSGGTEFGGSGNGNWGLGDNNSFSTFPGGTLEYGRRRVRDEQSANPVASLTLPPLASQFTPPPLVSSFEASSFMPSSSPQTTEFLGPRSLPTPSECVQWR-----ASRFPNAYNTVTSSALSPSSADQNSTVTPSKLKPPSVSRAASEPSVGVRRRKRSSDSRSPKYNNVQRKPDQGRGPPPRSNKPYSKHNGQQFQSKVRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRRGRPDAAQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTALSGLKKQAEEFFGSEAQAVQVLKSGEPELDPEVIESSDEILEGKYSAMVTPMELALDGVDVYD 1052
            PP +S  P +   C  +R+        P + +    V  +S    AVTRALGPHGNRT  NGYSNLFFR+DSIWSP+ DSH GDPVGNSGGTEF G G+ NWGLG+NNSFSTFPGGTLEYGRR  RDE   N VASLTLPP ASQF+P PL+SSF+ SSF P SSPQ+T  LG +S P  +    W      +S F N  N  +  A S S +D NST + +K+   +VSR ASEP+VG+RR KR +DS +  + N   K   G+ PP RSNK  SKHNGQQ+ SK+RRQVRTIFERAKEEE+NGN NEAR LLRQCLDLDKQDSHSWLALARLE++AGGV++RN  N  Q++ DS+  S  PSAARGTEIARSIFK GL++CPNSIHLIQAWAVLEHRCGNR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXX+KGLRAC+TAGNQSSAAIFRSXXXXXXXXXXXXXXXXXX KAIATQPRMTEAYVAL RLEARR GTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRV+EAR+LL++GHDCHP+DPAILQSLGTLEERCGN +EAKRLFY SVCARP APAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYN XXXXXXXXXXXXXXXXXXXX LKAHASASVWHGYGQLELK GRNPDRAR+LF+ GVGQTREDTSF XXXXXXXX  Q QV EAR VF DALKRYPRNSRVLVGAALAHAAS   T ++E EAV  F+RAVGADPTHAHAWQAWGVFELRRG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+AL GLKKQAEE+FGSEAQAV+VLKSGE +L P+V+E++DE LE KY+AMVTPMELALDG ++YD
Sbjct:    2 PPPASVQPISCNACSKSRTVPHAFLTTPPLLHAVHLVTRTSHRATAVTRALGPHGNRTITNGYSNLFFRTDSIWSPTLDSHHGDPVGNSGGTEFRGPGDNNWGLGNNNSFSTFPGGTLEYGRRHARDEPPPNHVASLTLPPPASQFSPSPLMSSFDGSSFAPHSSPQSTAILGSKSFPVGNSISPWSTXXXXSSHFSNNSNVFSPIASSVSPSDHNSTFSTTKMHVNNVSRPASEPAVGIRRGKRVADSPTGSFPNAHGKQHYGQSPPHRSNKQSSKHNGQQYHSKIRRQVRTIFERAKEEEKNGNFNEARTLLRQCLDLDKQDSHSWLALARLEARAGGVALRNHSNAAQSETDSDQQSLAPSAARGTEIARSIFKQGLDQCPNSIHLIQAWAVLEHRCGNRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXEKGLRACKTAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALGRLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVNEARKLLKKGHDCHPTDPAILQSLGTLEERCGNLDEAKRLFYRSVCARPIAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXXLKAHASASVWHGYGQLELKLGRNPDRARELFQQGVGQTREDTSFIXXXXXXXXLQQHQVLEARAVFHDALKRYPRNSRVLVGAALAHAASGSRTRAEEDEAVALFERAVGADPTHAHAWQAWGVFELRRGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSALGGLKKQAEEYFGSEAQAVRVLKSGEQDLGPDVVENADEGLERKYTAMVTPMELALDGGNLYD 1058          
BLAST of Ggra11066.t1 vs. uniprot
Match: R7Q4Y4 (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y4_CHOCR)

HSP 1 Score: 457 bits (1175), Expect = 5.060e-142
Identity = 330/537 (61.45%), Postives = 392/537 (73.00%), Query Frame = 0
Query:  283 RRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRRGRPDA 819
            RR +R  FERA+ EERNGN+  AR L R CL LD+ D+HSWLALARLE++ GGV++R         +D++  +   S A G + A+ +F+ GL ECP+S+HL+QAWAVLEHRCG+RD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+ +  H     XXXXXXXXXXXXXXXXXXX  GL+ CR++   S++ ++R+                  +KAI +QP  TE+YVALA+LEARR  TTRA+EL+  AA LS KPP +VFNAWAQIEW   G+VDEAR +L+ GH  HP DPA+LQSLG LE++CG  E A++LFY SVC +P  PAFVAWALL              EE L+ D LHGAAYNAXXXXXXXXXXXX        GLKA AS+SVWHGYGQLELK G +P RAR+LFR G  +TR DTSF XXXXXX    +++V EAR++F++ALKRYPRNSRVLVGAALA AASC   ++ +  A DFFKRAV ADPTHAHAWQAWGVFELR GR DA
Sbjct:  105 RRVIRATFERARLEERNGNVPIARALYRDCLALDRGDAHSWLALARLEARVGGVNLRV-------GSDAKEITEKQSHAEGAKEAKRLFEEGLRECPDSVHLLQAWAVLEHRCGDRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTLQVGAHXXXXXXXXXXXXXXXXXXXXXXXXXXGLKNCRSSEGSSASNLWRNWAEMEERIGDLPRARELLSKAITSQPHFTESYVALAKLEARRSCTTRALELIATAAGLSAKPPPAVFNAWAQIEWAYRGKVDEARSILQRGHMMHPKDPALLQSLGILEDKCGKTEVARKLFYKSVCVKPAGPAFVAWALLEDREGNYEEANRLFEECLTIDPLHGAAYNAXXXXXXXXXXXXKARSVYGRGLKACASSSVWHGYGQLELKLGGDPARARELFRKGTEKTRGDTSFIXXXXXXLELTEKRVIEARQLFKNALKRYPRNSRVLVGAALAEAASCPQYIADKNSARDFFKRAVAADPTHAHAWQAWGVFELRSGREDA 634          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A1X6PKZ8 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKZ8_PORUM)

HSP 1 Score: 222 bits (566), Expect = 2.370e-57
Identity = 252/547 (46.07%), Postives = 306/547 (55.94%), Query Frame = 0
Query:  282 VRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVS-IRNLRNNNQNDNDSEHHS----------------NPPSAA--------------------RGTEIA---RSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQ---------SSAAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQ----VREARRVFRDALKRYPRNSRVLVGAALAHAAS 775
            VRRQVR +++ A+  ER G+L EAR LL +CL LD++D+HSWLALARLE++A G++ +R++       + +  HS                N P AA                    RG ++A   R +F+ GL ECP+++HL+QAWAVLEHRCGN D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +V+LRP  EV  XXXXXXXXXXXXXXXXXXX           +          ++AA+ R+XXXXXXXXXXXXXXXX   +A+  +   +  +VAL +LEAR        EL+ AA S+   PPAS ++A AQ+E T  G V  AR LL  GH  HP D A+LQSLG +E R GN  EA+  F  SV A PTA AFVAWALL              E AL++D  HG AYNA                    GL A AS SV HG                         TREDTS+                     A  VF D L+RYPRNS++LVGAALA  AS
Sbjct:  156 VRRQVRELYDHARACERAGSLAEARSLLVECLALDRRDAHSWLALARLEARAAGLAGVRSVDVVGTGASPAAAHSXXXXXXXXXXSSNSFGNVPGAAVVLREDAPAAADAFPAGGDGRGLDVAATARRVFQQGLAECPDNVHLLQAWAVLEHRCGNNDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSVALRPQREVXXXXXXXXXXXXXXXXXXXXXXXXXTVPPEVADTPTASIRQAAAAAALLRAXXXXXXXXXXXXXXXXLLVRALGVRRGQSATHVALGKLEARXXXXXXXXELLHAALSMDDVPPASAYHAIAQLEATSFGDVATARELLLAGHAAHPQDSALLQSLGMIETRAGNRPEARDYFRRSVAAAPTAAAFVAWALLEAADGATQAAVDLFERALASDPRHGPAYNAYGALEARRGRIDSARAVFDRGLAAGASVSVLHGXXXXXXXXXXXXXXXXXXXXXXAC-TREDTSYVWHSWGMLELHALGEGGGASAATAVFADGLRRYPRNSQLLVGAALAAVAS 701          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A7S1TF60 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF60_9RHOD)

HSP 1 Score: 191 bits (485), Expect = 1.880e-46
Identity = 249/543 (45.86%), Postives = 318/543 (58.56%), Query Frame = 0
Query:  280 SKVRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQSS--AAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLE-LKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRRGRPDA 819
            +++R +V+  F++ K  E+ G    AR+  ++CL++D +D+HSWLALARLE++ G   + N                          AR +F+ G + CP ++ ++QAWAV+E++ G+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + +RP  EV  XXXXXXXXXXXXXXXXXXX + +  C  + + +   A   R XXXXXXXXXXXXXXXXXX   +  +   +E ++ LARLEARR  T RA+ELM  AAS+ P   ASV+N WA +     G+V EA  ++R+G +  P DP+I                           RPTAPAFVAWALL              E+A+  D LHG     XXXXXXXXXXXXXXXXXXXX                   +  GR+ +R+R +FR GV Q+R+D SF            R   EARR+F++A K YP NSR+LVG+ LA  AS    L Q  +A   F+ AV +DPTH   WQ WGVFELR+G  DA
Sbjct:  113 AELRARVKMCFQQGKTCEKRGEWLNARMNYQECLNMDPRDAHSWLALARLEARRGYKFLPN--------------------------ARLLFEAGTQCCPENVRILQAWAVMEYKSGDIALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCLEIRPRLEVXXXXXXXXXXXXXXXXXXXXXXEAISTCTPSEHTAPRIARTLRQXXXXXXXXXXXXXXXXXXXXXLRVEL-SSETHLTLARLEARRGSTKRALELMSVAASM-PGATASVYNGWA-VMLVDQGQVSEALEVIRKGINALPLDPSIFXXXXXXXXXXXXXXXXXXXXXXXXDLRPTAPAFVAWALLEERCEFYERARALFEKAIRVDPLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTLGRDLNRSRQIFRQGVTQSRDDASFIWHSWGMLELKNRDPLEARRIFQEARKLYPTNSRILVGSGLAFGASRPGLLPQLDDARRCFRAAVLSDPTHPQGWQCWGVFELRQGNTDA 626          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A7S0G728 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G728_9RHOD)

HSP 1 Score: 175 bits (444), Expect = 1.580e-43
Identity = 148/301 (49.17%), Postives = 179/301 (59.47%), Query Frame = 0
Query:  523 EAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRRGRPDAAQAL 823
            E  + LA+LEAR     + ++LM+   S + +  A+ +N WA +E          R LL+EG+   P D A+LQ+ GTLEE+C   E A+ L+  SV  RPTA A VA    XXXXXXXXXXXXXX      D LHGAAY+AXXXXXXXXXXXXXXXXXXXX      SASV  GY QLE+K G   DRAR+LFR GV QTR D SF           +R    AR +  +A KRY  NSR+L  +ALA A S        +++ +FFK AV  DP HAHAWQ WGV E R G    A+ L
Sbjct:  132 ETRIKLAKLEARAGSLLKGLDLMKGVDSEAEQLSANAYNGWAFLEMQAAN-TGRTRELLKEGNAKFPMDGALLQTWGTLEEKCCEYETARELYSKSVEVRPTAVALVAXXXXXXXXXXXXXXXXXXXXXXRVDPLHGAAYHAXXXXXXXXXXXXXXXXXXXXXXXRDPSASVLVGYAQLEMKFGSRKDRARELFRRGVSQTRGDASFIWHAWLTMELRERDPLSARSIALEARKRYSGNSRILAASALAEAMSARGVPPDLEKSREFFKEAVLLDPFHAHAWQTWGVHEFRNGNEAIARGL 431          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A5J4YQR2 (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQR2_PORPP)

HSP 1 Score: 180 bits (457), Expect = 7.260e-43
Identity = 218/575 (37.91%), Postives = 282/575 (49.04%), Query Frame = 0
Query:  283 RRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRAC---------------RTAGNQSSAA-------------------------IFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTR--AVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHA-SASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRR 814
            +R V  +F RAK+ E       A+ L  + L +D++D H+WLAL +L                              A + +  AR IF+  L  C +++ L+QA+AV E + GN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VS+RP  +VC XXXXXXXXXXXXXXXXXXX   LR                  T+G+ +S                           +  +                  N+A+  Q    E  + LARL++R   ++   A+  +R A  L  K P +V N WA +E    G   +A  +L  G   +PSDP I  +LGT+ E C   E+A+  +  SV A   AP  VAWALL              + AL  D LHG AYNA                    GL +   S S++HG  QL   +G   D+AR L R GV  TRE T +              V EARR+   A+KRYP +SRVL+ AALA++A     +++   A + F++AV ADP HAHAWQ WGVFE  R
Sbjct:  114 KRAVVDLFRRAKKLESENQCAAAQALYEEGLAIDRRDGHTWLALGQL-----------------------------IARKDSTRAREIFEEALRHCHDNVFLLQAFAVFESKNGNVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCVSIRPQSQVCLXXXXXXXXXXXXXXXXXXXXXXLRIAPGTRGHRNVTRRANTSTSGSAASGGASTSSSPAKAPHDRKLGKYIDTQCRVLCAWAELEERMGDHKEALQLLNRALELQKDDPETIMVLARLQSRTSASSMQPALLTLRNALHLDDKLPRNVINGWANLELKA-GNAYKALEILNAGKVHYPSDPCIFMTLGTVHESCSQFEQARDWYARSVDAEARAPTLVAWALLEERCGHFDLARSLFQRALRVDPLHGQAYNAYAMMEQRLNDQERALAVYQHGLDSGVCSVSLYHGASQLHKARGEY-DQARALLRQGVLLTRESTVYLWHSWGMLEIRLNNVSEARRIGELAMKRYPNDSRVLLVAALAYSACSAEYVAEVDRARELFRKAVLADPMHAHAWQVWGVFEASR 657          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A7S1EU19 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU19_9RHOD)

HSP 1 Score: 169 bits (429), Expect = 5.380e-40
Identity = 232/525 (44.19%), Postives = 289/525 (55.05%), Query Frame = 0
Query:  298 RNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQSS--------AAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFELRR 814
            R G    A  LL QC+ +D  DSHSWLALAR +S+                               T +A   F+  +  CP+++HL+QA+ V + R G+ D             XXXXXXXXXXXXXXXXXXXXXXXXXXX  +V +   PEVC XXXXXXXXXXXXXXXXX  +   RA   +  +S+        A I R XXXXXXXXXXXXXXXXX  +A+      TE  +A+AR +AR      AVE +R +     +  ++V+N WA +E    G ++ AR LLRE H+ +PSD ++L + G +E++  N E A+ L+  S    P +   V+WALLXXXXXXXXXXXXXX   L  +  HG AYNA XXXXXXXXXXXXXXXXXXX                                  GV  TRED+SF           QR+V EA RV   A +R+P NS++L+ + L  A       S    A  FFKRAV +DP HAHAWQ WGVFELR+
Sbjct:  102 RQGKTKAACGLLEQCIKMDPTDSHSWLALARFQSRLEPA---------------------------TTLAIQTFENAIINCPDNVHLLQAFGVEQGRRGHFDRARALFASAKDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSVKINKQPEVCXXXXXXXXXXXXXXXXXXLYRAAFRATDKSYRESAMDRRERTKAWILRXXXXXXXXXXXXXXXXXXLEQALQHGKNRTETRMAIARFQARHGTVQAAVESLRESCLGREQATSNVYNGWATLE-ARAGNINRARELLREAHEMYPSDSSLLHTWGDVEQKDKNYEAARDLYRRSTNVAPRSMTLVSWALLXXXXXXXXXXXXXXXXXLELEPSHGPAYNAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGVRLTREDSSFLWHSWGMMELKQRRVHEAERVLTIARRRFPNNSQILLASGLTSAFGTSDHPSDTNRARAFFKRAVSSDPKHAHAWQVWGVFELRQ 598          
BLAST of Ggra11066.t1 vs. uniprot
Match: M2Y9Y5 (PsbB mRNA maturation factor Mbb1 (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y9Y5_GALSU)

HSP 1 Score: 158 bits (399), Expect = 6.870e-36
Identity = 189/562 (33.63%), Postives = 256/562 (45.55%), Query Frame = 0
Query:  282 VRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRT----------AGNQSSAAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTREDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAA-----SCIHTLSQEKEAVDF-----FKRAVGADPTHAHAWQAWGVFELRRGRPDAAQAL 823
            +++ VR  F+ AK+ E NGN   AR LL QCL+LD  D+HSWLALA+L  K                              G E  R      +E CP ++ L+ A+AV E++ G  DT                                          + +  + EV   XXXXXXXXXXXXXXXXXX+  L+   T          A   + A ++R+                  +KA++  P  +E Y ALA+LE + +    A   ++ A ++      ++++ WA +E      VD AR+LL +    + +D +I+Q+                    S+  RP APAFVA    XXXXXXXXXXXXXX  AL  D LH      XXXXXXXXXXXXXXX     G++   S  + HGY QLELK   +  +A+ L   G     ED SF           QR  +EA   F   + RYPRNS + +G AL + A       +   +Q    + F     F+ A+  DP HAHAWQAWGVFEL +GR + A+ L
Sbjct:   86 IKKLVRERFQAAKKAEGNGNWKLARKLLTQCLELDLTDAHSWLALAKLMMKQ---------------------------CFGVEEIRRFLNEAIERCPENVRLLHAYAVFEYKAGFPDTARQLFQKGLSIEMDNGYIYQAWGLMEQRLGNIERARELFHECLQMDANLEVFIAXXXXXXXXXXXXXXXXXXEMALKKLNTFPPQEKIKRRASWNAKAGLYRAWANVEESFGNISLAMELLSKAVSECPVESETYFALAKLEYKCKNWLNARRWIQLAETVGGPINVAIYSFWAILEEKL-NHVDIARQLLEKASRIYVADCSIVQTXXXXXXXXXXXXXXXXXXXXSIDIRPNAPAFVAXXXXXXXXXXXXXXXXXXXXALLVDTLHSXXXXXXXXXXXXXXXXXXXXAILEDGMRKVCSPCILHGYAQLELKYCNDISKAKQLLLEGTKCAYEDNSFVWHSLGYLELLQRNYKEAIHSFEQGISRYPRNSLLYLGLALCYVAILKEPDWVAKSNQAGTQLPFSIRRNFEEAIQCDPFHAHAWQAWGVFELSQGRYEVARDL 619          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A0M0JHX7 (mRNA maturation factor chloroplast n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHX7_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 1.640e-28
Identity = 102/255 (40.00%), Postives = 138/255 (54.12%), Query Frame = 0
Query:  559 VFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQLELKQGRNPDRARDLFRLGVGQTR--EDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGVFE 811
            +FNAWA  E    G V  A  +LR     +P DP++LQ+LGTL++R G+ + A+  F  S+   P AP FVA+ALL                  + D  HG     XXXXXXXXXXXXXXXX     +    SA++WHG+G+LE +QG N + A +L+  G   ++  +D S+           QR++ EA   F + L R P +S +L+G A+ H       +    E   FF RAV ADP+HAHAWQAWGV E
Sbjct:  205 LFNAWAVFE-AKLGDVPAALEVLRRARKRYPRDPSLLQTLGTLQQRAGDLDGARASFSQSLAILPHAPTFVAYALLEASLGNIERARELFALGAAADPTHGXXXXXXXXXXXXXXXXXXXXXVLREAVARFPSATLWHGWGKLEERQG-NLEHAAELYGKGARASKGNDDPSYLWHSLGSVLLQQRRLPEALAAFENGLSRRPCSSLLLLGVAIVHGQ-----MGAFDEGRSFFLRAVQADPSHAHAWQAWGVME 452          
BLAST of Ggra11066.t1 vs. uniprot
Match: A0A1Z5JWF6 (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWF6_FISSO)

HSP 1 Score: 129 bits (324), Expect = 9.380e-27
Identity = 150/563 (26.64%), Postives = 217/563 (38.54%), Query Frame = 0
Query:  282 VRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDNDSEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXQKGLRACRTAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXNKAIATQPRMTEAYVALARLEARRR-----------GTTRAVEL--MRAAASLSPKPPAS---VFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGTLEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLXXXXXXXXXXXXXX-----EEALSTDALHGAAYNAXXXXXXXXXXXXXXXXXXXX-GLKAHA--SASVWHGYGQLELKQGRNPDRARDLF--------RLGVGQT---REDTSFXXXXXXXXXXXQRQVREARRVFRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTHAHAWQAWGV 809
             R++VRT+F++A+  E+ G   +A   L   L LD +DSHS+LALARL+++                         P++   T IA   F  G   CPNS+HL QAWAV E   G  D                                                   VC+                   +  L    +   ++  A+  +                            +   VA+AR E RR+           G  +  E   +  A  ++ +  A+   VFNA A IE     R+  AR++L  G + HP D ++LQ+ G +EER GN   A+ L+ +S+C +P+AP  VA ALL                   EEAL  D  H  AYNA                     G++A    +AS++HG+ +LEL  G N D AR L         R  +G+    RE   F             ++  A  VF D + +Y  +S++L+GAAL     C   L    +A   F+++V  D  HAHAWQAWGV
Sbjct:   84 TRQKVRTLFQKAQYLEKKGLWRKAAQTLNDILVLDPRDSHSYLALARLQARRF-----------------------PNSTSAT-IA---FHNGTSACPNSVHLWQAWAVYEQNVGRTDRAKELFGRALELDPYNPYVCHAYGLLLEKNNVTAAVNLWQHALEKKSTAALVCSLGTAYIAQEEYGKARKLYAEH-LNKIPSDRERTEVALASAWLEERYFSNINGARQLLTESLRNATTSASLVQVAMARFEGRRKNERVTPYTSEGGIRKNAERRKLEQACEMNIQDSAADGRVFNALASIE-VKARRLKSARQILNRGLELHPKDYSLLQAAGKVEERMGNYTGARTLYRSSLCIQPSAPCLVAIALLELHHPTTKKTNFALVKQLFEEALLIDPRHAPAYNAYARCVFEQEDDERQARSIFERGVRAKCPDAASLYHGFAKLELALG-NIDSARKLLIEGRNAAKRQEIGKDSPHRERALFLMHTLGMLELNSNRIVSALEVFSDGVTQYGNSSQLLLGAAL-----CEVRLGNVDKARILFEKSVINDRRHAHAWQAWGV 611          
The following BLAST results are available for this feature:
BLAST of Ggra11066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A2V3J3260.000e+079.56PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
R7Q4Y45.060e-14261.45TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6PKZ82.370e-5746.07Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TF601.880e-4645.86Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S0G7281.580e-4349.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A5J4YQR27.260e-4337.91PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
A0A7S1EU195.380e-4044.19Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
M2Y9Y56.870e-3633.63PsbB mRNA maturation factor Mbb1 (Plastid) n=1 Tax... [more]
A0A0M0JHX71.640e-2840.00mRNA maturation factor chloroplast n=1 Tax=Chrysoc... [more]
A0A1Z5JWF69.380e-2726.64Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 634..654
NoneNo IPR availableCOILSCoilCoilcoord: 737..757
NoneNo IPR availablePFAMPF13432TPR_16coord: 500..553
e-value: 0.005
score: 17.4
coord: 734..800
e-value: 1.9E-7
score: 31.5
coord: 879..931
e-value: 1.5E-4
score: 22.3
coord: 630..690
e-value: 0.001
score: 19.6
NoneNo IPR availablePFAMPF13428TPR_14coord: 802..843
e-value: 2.0E-6
score: 28.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..286
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 903..936
e-value: 240.0
score: 2.8
coord: 767..800
e-value: 47.0
score: 9.0
coord: 835..868
e-value: 35.0
score: 10.2
coord: 286..319
e-value: 10.0
score: 14.9
coord: 869..902
e-value: 74.0
score: 7.3
coord: 416..449
e-value: 84.0
score: 6.8
coord: 801..834
e-value: 6.9
score: 15.6
coord: 625..658
e-value: 31.0
score: 10.6
coord: 488..521
e-value: 36.0
score: 10.1
coord: 728..761
e-value: 32.0
score: 10.6
coord: 659..692
e-value: 470.0
score: 0.2
coord: 382..415
e-value: 120.0
score: 5.4
coord: 937..970
e-value: 0.35
score: 19.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 937..970
score: 10.974401
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 728..761
score: 8.4374
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 801..834
score: 8.0539
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 606..637
e-value: 1200.0
score: 0.2
coord: 917..949
e-value: 150.0
score: 6.9
coord: 707..740
e-value: 510.0
score: 2.9
coord: 362..394
e-value: 14.0
score: 14.4
coord: 673..704
e-value: 73.0
score: 9.1
coord: 300..332
e-value: 5.1
score: 16.1
coord: 430..461
e-value: 1200.0
score: 0.2
coord: 815..847
e-value: 0.62
score: 19.1
coord: 849..881
e-value: 0.089
score: 21.9
coord: 502..534
e-value: 7.4
score: 15.5
coord: 781..813
e-value: 48.0
score: 10.4
coord: 572..604
e-value: 120.0
score: 7.4
coord: 396..428
e-value: 34.0
score: 11.5
coord: 883..915
e-value: 0.78
score: 18.8
coord: 463..500
e-value: 0.0016
score: 27.7
coord: 951..983
e-value: 0.0017
score: 27.6
coord: 639..671
e-value: 17.0
score: 13.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 625..771
e-value: 2.5E-23
score: 84.7
coord: 773..1015
e-value: 4.7E-42
score: 146.2
coord: 266..479
e-value: 7.6E-29
score: 102.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 480..624
e-value: 8.5E-15
score: 56.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 375..763
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 734..978
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 293..451
coord: 820..988
coord: 662..828
coord: 412..657

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000207_piloncontigtig00000207_pilon:27030..30191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11066.t1Ggra11066.t1Gracilaria gracilis GNS1m malemRNAtig00000207_pilon 27030..30191 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11066.t1 ID=Ggra11066.t1|Name=Ggra11066.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1054bp
MTVSPPASSQSPSALYYCYVARSCFVPPVMPNRAQHVALSSQCNAAVTRA
LGPHGNRTFVNGYSNLFFRSDSIWSPSFDSHRGDPVGNSGGTEFGGSGNG
NWGLGDNNSFSTFPGGTLEYGRRRVRDEQSANPVASLTLPPLASQFTPPP
LVSSFEASSFMPSSSPQTTEFLGPRSLPTPSECVQWRASRFPNAYNTVTS
SALSPSSADQNSTVTPSKLKPPSVSRAASEPSVGVRRRKRSSDSRSPKYN
NVQRKPDQGRGPPPRSNKPYSKHNGQQFQSKVRRQVRTIFERAKEEERNG
NLNEARILLRQCLDLDKQDSHSWLALARLESKAGGVSIRNLRNNNQNDND
SEHHSNPPSAARGTEIARSIFKLGLEECPNSIHLIQAWAVLEHRCGNRDT
ARELFARGLALEPDNPYVSQAWGLLEQRVGNTDKARELFRQTVSLRPHPE
VCAAWAVLEAREGNIQHARDLYQKGLRACRTAGNQSSAAIFRSWAEMEER
VGDLPKARELLNKAIATQPRMTEAYVALARLEARRRGTTRAVELMRAAAS
LSPKPPASVFNAWAQIEWTCCGRVDEARRLLREGHDCHPSDPAILQSLGT
LEERCGNPEEAKRLFYTSVCARPTAPAFVAWALLEEKDGNLDEAKRLFEE
ALSTDALHGAAYNAYGMMEARRGCLNDARAVYERGLKAHASASVWHGYGQ
LELKQGRNPDRARDLFRLGVGQTREDTSFIWHSWGMLELQQRQVREARRV
FRDALKRYPRNSRVLVGAALAHAASCIHTLSQEKEAVDFFKRAVGADPTH
AHAWQAWGVFELRRGRPDAAQALFRRGLRLCPSHGALWQAWGVLETSRGN
FSKARQLYQKGAQACPAHVHLFQAWACMEVRSGNIDKARKLLDHALELDA
AHGAVWTAYGLLEARQGTLAKARQNFTTGIRRSPHHAPLYRAFGQTESSA
GNYERARQLFQEGLRVDPQHAPLYHAYAQFEAMLGNVTALSGLKKQAEEF
FGSEAQAVQVLKSGEPELDPEVIESSDEILEGKYSAMVTPMELALDGVDV
YDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR003107HAT
IPR011990TPR-like_helical_dom_sf
IPR044624Mbb1-like