Ggra11060.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra11060.t1
Unique Name	Ggra11060.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	175

Homology

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BLAST of Ggra11060.t1 vs. uniprot
Match: A0A2V3J2U9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2U9_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 2.200e-52
Identity = 138/176 (78.41%), Postives = 149/176 (84.66%), Query Frame = 0

Query:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVPDDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKETNADGNATTEKFSGWAKTDEAP----ADEETAAAAQAPISAFPTLADAAKVKKVAPSQSSSEPSTTARRPRFTLANREKLLQALTGGREPMKP 172
            MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K PDDGWIEIEDVRGSQVNTGGRTIVQL+R  EEKET+ DG+AT EKFSGWAKTD  P    A +ETA   QAP SAFP+LADAAKVKKV PS+S+++     RRPR +LA REKL+QALT  REPMKP
Sbjct:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KQPDDGWIEIEDVRGSQVNTGGRTIVQLKRGAEEKETSVDGSATVEKFSGWAKTDADPPTSDAPDETA---QAPSSAFPSLADAAKVKKVPPSKSATKEGPPVRRPRMSLAEREKLIQALTANREPMKP 172

[Close]

BLAST of Ggra11060.t1 vs. uniprot
Match: R7Q4N6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4N6_CHOCR)

HSP 1 Score: 108 bits (271), Expect = 8.630e-27
Identity = 74/173 (42.77%), Postives = 88/173 (50.87%), Query Frame = 0

Query:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVPDDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKETNADGNATTEKFSGWAKTDEAP----ADEETAAAAQAPISAFPTLADAAKVKKVAPSQSSSEPSTTA------RRPRFTLANREKLLQAL 163
            MSDLNDFFAKKDR                                 Q+  DDGWIEIED +G++VNTGGRT+V+ +R  EE +   DGN  TEKF+GW K    P    A+E  A AA  P SAFP+LAD     +V  S   S  STT       RRPRF  +N  K+ Q L
Sbjct:    1 MSDLNDFFAKKDRKKKKAGARSSAGVVQRKEQEPETEPSIAEPSPKQQ--DDGWIEIEDPKGAKVNTGGRTVVEFKRGVEENDNQIDGNEPTEKFTGWIKESSEPTAEEAEETAAPAAAIPSSAFPSLADTTDAPEVPLSHGKSFSSTTTSGLSSTRRPRFFNSNASKIRQKL 171

The following BLAST results are available for this feature:

BLAST of Ggra11060.t1 vs. uniprot

BLAST of Ggra11060.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J2U9	2.200e-52	78.41	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q4N6	8.630e-27	42.77	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000207_pilon	contig	tig00000207_pilon:14097..14790 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra11060.t1	Ggra11060.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000207_pilon 14097..14790 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra11060.t1 ID=Ggra11060.t1|Name=Ggra11060.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MSDLNDFFAKKDRKKKKAAAKSAQAAAAQAVKQSETASENPPPPPPQKVP
DDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKETNADGNATTEKFSGWAK
TDEAPADEETAAAAQAPISAFPTLADAAKVKKVAPSQSSSEPSTTARRPR
FTLANREKLLQALTGGREPMKPPK*