Ggra11036.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11036.t1
Unique NameGgra11036.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length417
Homology
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BLAST of Ggra11036.t1 vs. uniprot
Match: A0A2V3J698 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J698_9FLOR)

HSP 1 Score: 393 bits (1009), Expect = 1.430e-130
Identity = 244/471 (51.80%), Postives = 298/471 (63.27%), Query Frame = 0 
Query:    1 MTNVHKDPRVRPVSAAEGRGYARNPHMFIDVLRIPSITEAVEEASRLLRVGIQRKREPPP---------------------------------------------------KPVDPERPNTVVKGWNSAKKAGPSILSKRAASNSSSVFQPAPKREKKNEIPQNEKTNTEKSDGEPSSKVETGNES-ERQTKVHQMPCEQDTAKL--TKAQEERRAQPEVSKVVMVNGTERNQSKRKTAPSTKGSSSVQVGKATSVGEAHTQKSASEIWAKAVNASAEERALKHKNTLT-VGARRSGLPASWGQVSSSRGASKQPSVLSLLRKQGGLGQAKMQIPRSGANAISPVTQSVIRPPTATFNQSTMIPMPRATGLEILFVPGSEVIGGVRPNGYTVSRQGVVKPLITFNPKPKVPHKVRQTSLEKLFEAWRDNKGLKEGEALAKALRTEQEMYAAANSRVEYRAAVTVKLKEIRK 416
            M NVHKDPR+R  S ++GR Y RNPHMFIDVLRIPSIT+AVEEASRLLRVGI R  +  P                                                   K  +PERP   +KGWNS KKAGPSILSKR   NS SVFQPAPKREKKN+IPQN+ T  ++ + E S++V    ++ E +T +  +  +Q T+    T  +    A  E+        + +  S+  TA  T    S Q   +    +   ++SASE+WAKA++ S  ER  K K +L+ VG RRSGLPASW  VS +R +SKQPSV+SLLRK  GL QAK Q+  SG + +  V Q++     +  N S +IPMP  TGL+I +VPGSEVIGGVRPNGYTVSRQGVVKP+ITFNPK KVPHK+RQTS+EKLFEAWRDN+ L EGEALA ALRTEQEMYAAAN RV+YRAAVTVKLK++RK
Sbjct:    1 MNNVHKDPRLRASSTSDGRSYVRNPHMFIDVLRIPSITQAVEEASRLLRVGIIRAMQSNPGAESDSETAKQARNHKASTPATSSQRDPVSVYSAVTKCVSKPTEDGAKKEGKSTEPERPALPLKGWNSEKKAGPSILSKRNLPNSQSVFQPAPKREKKNDIPQNDSTKKKRHENESSTRVGKNKDNIEGKTDLSDVQGQQPTSAKPPTDPRPTAPAHQELKPAQNRISSNKVGSQTTTAMGTTDFVSTQTSVSQKSEDTGNKRSASEVWAKALSVSNSERTSKQKASLSIVGGRRSGLPASWSHVSGTRTSSKQPSVISLLRKPSGLAQAKSQMASSGGSVLPSVAQAMSSAHKSNTNTSAVIPMPNMTGLQIQYVPGSEVIGGVRPNGYTVSRQGVVKPVITFNPKSKVPHKLRQTSVEKLFEAWRDNQKLVEGEALAMALRTEQEMYAAANGRVDYRAAVTVKLKDVRK 471
The following BLAST results are available for this feature:
BLAST of Ggra11036.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J6981.430e-13051.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000894_piloncontigtig00000894_pilon:171952..173472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11036.t1Ggra11036.t1Gracilaria gracilis GNS1m malemRNAtig00000894_pilon 171952..173472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11036.t1 ID=Ggra11036.t1|Name=Ggra11036.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=417bp
MTNVHKDPRVRPVSAAEGRGYARNPHMFIDVLRIPSITEAVEEASRLLRV
GIQRKREPPPKPVDPERPNTVVKGWNSAKKAGPSILSKRAASNSSSVFQP
APKREKKNEIPQNEKTNTEKSDGEPSSKVETGNESERQTKVHQMPCEQDT
AKLTKAQEERRAQPEVSKVVMVNGTERNQSKRKTAPSTKGSSSVQVGKAT
SVGEAHTQKSASEIWAKAVNASAEERALKHKNTLTVGARRSGLPASWGQV
SSSRGASKQPSVLSLLRKQGGLGQAKMQIPRSGANAISPVTQSVIRPPTA
TFNQSTMIPMPRATGLEILFVPGSEVIGGVRPNGYTVSRQGVVKPLITFN
PKPKVPHKVRQTSLEKLFEAWRDNKGLKEGEALAKALRTEQEMYAAANSR
VEYRAAVTVKLKEIRK*
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