Ggra11034.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11034.t1
Unique NameGgra11034.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length108
Homology
The following BLAST results are available for this feature:
BLAST of Ggra11034.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 16..43
e-value: 32.0
score: 8.8
coord: 54..77
e-value: 0.052
score: 22.7
coord: 82..106
e-value: 0.045
score: 22.9
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 82..106
e-value: 0.0022
score: 18.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 84..106
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..77
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 82..107
score: 9.265423
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..82
score: 10.450058
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 54..77
e-value: 4.9E-4
score: 20.7
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 44..107
e-value: 6.7E-10
score: 40.9
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 54..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000894_piloncontigtig00000894_pilon:167191..167845 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11034.t1Ggra11034.t1Gracilaria gracilis GNS1m malemRNAtig00000894_pilon 167191..167845 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11034.t1 ID=Ggra11034.t1|Name=Ggra11034.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=108bp
MSNQGSSSRGRKKKKIYCPEPSCTTQKPFTSESSYSRHTNYFHKGGGEGQ
RGSHECESCGNTYMDKNALKTHIKAKHESPRYDCPNPTCNESYPSQESLD
QHLLRHI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf