Ggra11024.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11024.t1
Unique NameGgra11024.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length590
Homology
BLAST of Ggra11024.t1 vs. uniprot
Match: A0A2V3J6C6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6C6_9FLOR)

HSP 1 Score: 568 bits (1464), Expect = 5.780e-195
Identity = 368/598 (61.54%), Postives = 453/598 (75.75%), Query Frame = 0
Query:    1 MTASPHHAHYTNEPPPPAVSLSNTHIELLISTYNDVFSSLRTNSYALAWILRAAFDTGYTSEDRRPDLNLSRGYSLLYVCARPSCASHLSETILQRTNTLLLPTQSRGQFVLGLFFDHVQNASSPPTTHIGRYTYSSVPGELFKCTRVEGTSPSNPSVIISRLILVNRTIFILDTVLVSFRYPTFTAVPENILLYSRRFSFHKLSTPLPPPQTPDGSFLGLADFGVYDSLSLPCPIPPGMRQVDSSHAIRTVPAHTSVCQAPRSMIVGILQDHLDRLRASYLQLVAADARLSLPMRTVDPFVPPRTNDVPQRRTMSPQPHQASFASQSSQPNQLTQQFSFPAQLM-PGTDDTI---HHAEGNARHFADCRMEAPRVPSDIPVSSPRLHVPQRL-----LPNNTMHESSAFPAREIAPSIAQVNPQLLPXSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSSIIFQEATDNTATIVNKPPKEQPVPPFKKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAYLKAYLPSLEQRKGCLIEENQSLKLRFIQRYREADIESFF 589
            M+ SPH+ HYT EPPP + +L + HI++L+++YNDVF SLR N  ALAWILRAAFD  + ++    DL+LSRGYSLL+ CARPSCASHL ETILQRTNTLLLP+QSRGQ VLG + DH Q  SSP TT +GRYTYSSVPGELFKCTR++GTSPS+P+V ISR+I+VN ++F+LDTV++SFRY +FT++P+N LL+SR FS H LS PL  P   +GSFLGL+DFGVYD+L L   +PPGM+QV+ S  ++  PAH   C  PRS++  +L +H++ L+AS++QLVA ++R+S PMR +D F   R N++ QR T+ P  H   + S S+QP QL QQ S  AQL+ PG D T    +      + + DCR     VP+DI V  P  HVP        +P+  +H++   PAR IA S+         X   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    I F E T+N +TIV KPP EQ VPPFKKTLPAPTKSEI+IRNRISAQRSNEKRRRRIE+TKMELAYLK+YLP+L++RKGCL+EENQSLK+RF++RYRE+D+ESFF
Sbjct:    1 MSISPHNNHYTPEPPPSSFTLPDNHIDVLLTSYNDVFRSLRENPAALAWILRAAFDPRHATDASHLDLSLSRGYSLLHTCARPSCASHLPETILQRTNTLLLPSQSRGQSVLGFYVDHTQTHSSPVTTQLGRYTYSSVPGELFKCTRLDGTSPSSPTVAISRIIIVNPSVFLLDTVIISFRYASFTSIPDNALLHSRHFSCHNLSAPLSSPSGTEGSFLGLSDFGVYDALILQYRVPPGMQQVEPSPLLQAAPAHLERCPNPRSILTNVLHEHIESLQASFVQLVAVNSRISAPMRALDTFAQTRLNELSQRVTI-PLQHAPPYISPSTQPVQLAQQLSLSAQLLHPGDDPTNSMPNSIPNTTQQYQDCR-----VPADIRVPLP--HVPXXXXXXXXIPSTGIHDNPTIPARNIASSVVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGFPEVTENASTIVKKPPNEQAVPPFKKTLPAPTKSEIIIRNRISAQRSNEKRRRRIEHTKMELAYLKSYLPTLQRRKGCLLEENQSLKVRFMERYRESDMESFF 590          
BLAST of Ggra11024.t1 vs. uniprot
Match: R7QKB9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKB9_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 3.380e-28
Identity = 149/555 (26.85%), Postives = 227/555 (40.90%), Query Frame = 0
Query:   79 VCARPSCASHLSETILQRTNTLLLPTQSRGQFVLGLFFDHVQNASSPPTTHI--GRYTYSSVPGELFKCTRVEG--TSPSNPSVIISRLILVNRTIFILDTVLVSFRYPTFTA-VPENILLYSRRFSFHKLST-----------------PLPPP----QTPDGSFLGLADFGVYDSLSLPCPIPPGMRQVDSSHAIRT----VPAHTSVCQAPRSMIVGILQDHLDRLRASYLQLVA-ADARLSLPMRTVDPFVPPRTNDVPQRRTMSPQPHQASFASQSSQPNQLTQQFSFPAQLMPGTDDTIHHAE-GNARHFADCRMEA----PRVPSDIPVSSPRLHVPQRLLPNNTMHESSAFPAREIAPSIAQVNPQLLPXSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSSII-------FQEATDNTATIVNKPPKEQPVPPFKKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAYLKA-YLPSLEQRKGCLIEENQSLKLRFIQRYREADIESFF 589
            +CA   C      + LQ   TLL+P Q+R   V G F   ++ A+   + H+  GRY Y S   EL K ++V G  T+    SV I+R+  +     + D V+VSF +      VP   + +SR  S+ K+                   PL P     +  + SF G+  FGV+ S  +P     G                VP+H   C+  R++++GI  + +  LR+ ++ +    +A+ + P+R+        + ++  R+             Q  +P   TQ      +L+  + +    A    A  F   R       P+ P    + +PR       +       SS    R++       +  LL    P                                                          SS I         QE  +  + +V+        P FKKTLPAPTK+EIVIRNRISAQRSNEKRRR+IE T+ ELAYL+  YLP L+ R+G L+ ENQ+L+ RF+++Y++  IESFF
Sbjct:    1 MCAERGCHPMQDRSALQSCATLLVPCQTRLSVVAGHF---IELATDDASNHMRTGRYVYFSSSRELVKVSKVRGPVTAAMLSSVCINRICPIGSGSIVQDHVVVSFPWHRNAGKVPARCVAHSRTLSYSKMLQTAKDAGFAGYGGVGDVMPLTPESGIARVLENSFHGIGSFGVFASTIVPSRFGFGAEAEGHRTPFEVGQWAVPSHMLSCRNFRTLLLGIEANDITSLRSHFVTMYGHVNAQGTRPLRS--------SVNLSHRQNQGATGEADIRGHQRLEPGAPTQSSVRSMELLSLSAENSGVAPITEAEAFRGARTTGIGSNPQPPPPFAMGAPRAETNVTGMGEVRGGPSSQKGGRDMGSLPTFGSSGLLLPIQPQMDVPRTQAFSSAVDEALKVGPSSVVDTIEAAVSVEPVASSPGVHTGATSALVAPGGPSSGITPASVGGRVQEGGEKKSEVVSVS-----APTFKKTLPAPTKNEIVIRNRISAQRSNEKRRRKIEATRTELAYLRTTYLPQLQHRRGSLLTENQTLRQRFMEKYQQQGIESFF 539          
The following BLAST results are available for this feature:
BLAST of Ggra11024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6C65.780e-19561.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKB93.380e-2826.85Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..338
NoneNo IPR availableCDDcd14686bZIPcoord: 524..573
e-value: 1.67401E-7
score: 45.9993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000894_piloncontigtig00000894_pilon:34322..36091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11024.t1Ggra11024.t1Gracilaria gracilis GNS1m malemRNAtig00000894_pilon 34322..36091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11024.t1 ID=Ggra11024.t1|Name=Ggra11024.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=590bp
MTASPHHAHYTNEPPPPAVSLSNTHIELLISTYNDVFSSLRTNSYALAWI
LRAAFDTGYTSEDRRPDLNLSRGYSLLYVCARPSCASHLSETILQRTNTL
LLPTQSRGQFVLGLFFDHVQNASSPPTTHIGRYTYSSVPGELFKCTRVEG
TSPSNPSVIISRLILVNRTIFILDTVLVSFRYPTFTAVPENILLYSRRFS
FHKLSTPLPPPQTPDGSFLGLADFGVYDSLSLPCPIPPGMRQVDSSHAIR
TVPAHTSVCQAPRSMIVGILQDHLDRLRASYLQLVAADARLSLPMRTVDP
FVPPRTNDVPQRRTMSPQPHQASFASQSSQPNQLTQQFSFPAQLMPGTDD
TIHHAEGNARHFADCRMEAPRVPSDIPVSSPRLHVPQRLLPNNTMHESSA
FPAREIAPSIAQVNPQLLPSSDPDLCSTVSGRESVHRARRGSQRILLGNG
ADMTPTVRVNEVAAGMPRMSSRVLPANSANTSSSIIFQEATDNTATIVNK
PPKEQPVPPFKKTLPAPTKSEIVIRNRISAQRSNEKRRRRIENTKMELAY
LKAYLPSLEQRKGCLIEENQSLKLRFIQRYREADIESFF*
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