Ggra10795.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10795.t1
Unique NameGgra10795.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length191
Homology
[Close]
BLAST of Ggra10795.t1 vs. uniprot
Match: A0A177WPX0 (EamA domain-containing protein n=3 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WPX0_BATDL)

HSP 1 Score: 60.8 bits (146), Expect = 1.120e-7
Identity = 41/137 (29.93%), Postives = 77/137 (56.20%), Query Frame = 0 
Query:   40 RHEMVGLFLMAFSTVGYSCMTVLIRLAERRYHFHPSSFMLLRGVLHTVASGVLAFAVFNASLTSLSWRLRRLLLFRGAIGACGMLCLYTALSHIPAGNVMSIFAFSPVITMTASHFVLRERATVVDALSAVIGLLGI 176
            R+E+ GL +MA S +G+S M+VL+++A R +   PS+ ++    +  + +GV+  A+   +        R LL+ RG  GA G+   +  + ++P G+  ++F   P  T  A++  L E  T++DA ++V  L+G+
Sbjct:   54 RNELFGLVIMALSALGFSIMSVLVKMAGRTF---PSTEVVFARSMFQLIAGVIGCAIVKVAPWGPPTVNRWLLIGRGMAGAMGLGFYFFTIINMPLGDGTTLFFIGPAFTAVAAYLFLNEPYTIIDAGASVCCLVGV 187
[Close]
BLAST of Ggra10795.t1 vs. uniprot
Match: A0A1S8W0Y6 (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W0Y6_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 1.130e-6
Identity = 43/142 (30.28%), Postives = 76/142 (53.52%), Query Frame = 0 
Query:   40 RHEMVGLFLMAFSTVGYSCMTVLIRLAERRYH-----FHPSSFMLLRGVLHTVASGVLAFAVFNASLTSLSWRLRRLLLFRGAIGACGMLCLYTALSHIPAGNVMSIFAFSPVITMTASHFVLRERATVVDALSAVIGLLGI 176
            ++E++G+  MA S +G+S M+VL+++A + +      F  S F L+ G+L     GV  +   N +        R LL+ RGA GA G+   +  + ++P G+  ++F   P  T  A++  L E  TV+DA ++   L+G+
Sbjct:   61 KNEILGMACMALSALGFSVMSVLVKMAGKAFPSTQIVFSRSVFQLVCGLLGCSMVGVAPWGPSNVN--------RWLLVSRGAAGALGLGFYFFTIINMPLGDGTTLFFIGPAFTAVAAYLFLNEPYTVMDAAASTCCLVGV 194
The following BLAST results are available for this feature:
BLAST of Ggra10795.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A177WPX01.120e-729.93EamA domain-containing protein n=3 Tax=Batrachochy... [more]
A0A1S8W0Y61.130e-630.28Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 44..176
e-value: 7.6E-14
score: 52.1
NoneNo IPR availablePANTHERPTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDcoord: 40..176
NoneNo IPR availablePANTHERPTHR22911:SF6SOLUTE CARRIER FAMILY 35 MEMBER G1coord: 40..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 158..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..99
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 87..178
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 44..66
NoneNo IPR availableTMHMMTMhelixcoord: 138..157
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 166..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:118703..119341 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10795.t1Ggra10795.t1Gracilaria gracilis GNS1m malemRNAtig00000225_pilon 118703..119341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10795.t1 ID=Ggra10795.t1|Name=Ggra10795.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=191bp
MTIPLYTTPHKGAEAQPLLPRAAAHAPSHAPSHAPSHALRHEMVGLFLMA
FSTVGYSCMTVLIRLAERRYHFHPSSFMLLRGVLHTVASGVLAFAVFNAS
LTSLSWRLRRLLLFRGAIGACGMLCLYTALSHIPAGNVMSIFAFSPVITM
TASHFVLRERATVVDALSAVIGLLGINGMQALIVHLHAMV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom