Ggra10791.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10791.t1
Unique NameGgra10791.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length258
Homology
The following BLAST results are available for this feature:
BLAST of Ggra10791.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 1..177
e-value: 1.1E-7
score: 33.4
NoneNo IPR availableCDDcd00397DNA_BRE_Ccoord: 2..164
e-value: 1.4343E-4
score: 39.3855
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 2..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:53561..54399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10791.t1Ggra10791.t1Gracilaria gracilis GNS1m malemRNAtig00000225_pilon 53561..54399 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10791.t1 ID=Ggra10791.t1|Name=Ggra10791.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=258bp
MIFNLALMTAVRKSELNELRLQDATKVVEGTETVYRIVGRIGSSDGASKT
QSGGLKWINSKPKEGFVWNRKQLHGIINVYAEIEEGSKPSSFFKPQNISS
STLVRYILDAFADNKIIGVGVRRSMALHGLRSTVIAELFGAGMGDASVAL
RSGHRDHRSFLSYTNLRGSLGKRQQEGILGGFSEPSSKGKEIEDNDCEKK
TFIALAVAEVGRVYKENEAPKDNSRNRSGRSIAAENKAGVVFREAEVLVQ
SFLNNRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR011010DNA_brk_join_enz