Ggra10790.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10790.t1
Unique NameGgra10790.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length486
Homology
BLAST of Ggra10790.t1 vs. uniprot
Match: A0A2V3IIK3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIK3_9FLOR)

HSP 1 Score: 313 bits (802), Expect = 3.750e-98
Identity = 188/492 (38.21%), Postives = 284/492 (57.72%), Query Frame = 0
Query:    1 MAIRTNISVSVFNIIRYLILGTGLDFIVRRSLDSFEHFRRRLSLYRGHSVSVAGHRIDRYNTLKVLTTGHLLSGSVLLLVSALAYTAELALEYAVDSSAIRYAIPGNVTRVEQREGVCSREEMIASGNALDIAFIADQCVKLEDNTYSFYRPVWVKSTSSKDRVNDDGLRVLCEAVEGNIMYEGDGIYGPSTTGKRSP---EVLELIQMLSENSYKTVGDKFLPLFVIKVSSSDILQTLWFAT-PSEQFSLSVFYANITGSSVQCMGSIIAGVERQDTSVVQVVACMDGFDEDSSLVLTSGSSFIEVESDDDADGVSNAWSTLVAFEIRTRIPRFFKGIRADDSSSRANAEGYSSFLARSFPQDVVTLNKYAIAYRFCDDIPLPVRNGTFWEEEYEFASSEVRVTATVEEWAIVLAVCWVMVVTVAHLLVSLVAARKNMPDKVLGEQDILLRWAAENEGKQMEGRGTVAL-------LSVEGGAKGGRITAT 481
            M + TN+ V +FN+++YL +   +D +VR  LD FEHFRRRLSL+RG+SV     RIDRYN L  ++     S  VLL ++  AY  E+ LE+A DS A R+ I G V R+    GVCS + +I   NA   A +A++C+ LEDN Y  YRP+W+ S        +D  + LCE   GN++YE   +Y  S  GK +    E+ +LI+ +  +SYK+ GD       ++++S DI+    +    +E F+ +VF   +  + V+C+G++  G   +    V ++AC +GF E+ +L    G+  +E++  D    V   WST++A E R  + +F +G+  +   +  NA  Y++FLA S  +D + +NKYAIAYR C  + +P RN   W E   F  SE R+TATVE WAI++ VCW++VVT A +L+  VA  K MP+++LGEQ ++ RW  E E +++ G G  ++       LSVE G     ITAT
Sbjct:    1 MELNTNLPVPIFNVLKYLFITLAIDGVVRSGLDGFEHFRRRLSLHRGYSVHFESTRIDRYNLLHQISFCRF-SSLVLLFITLAAYAVEIGLEFATDSKATRFPIAGTVRRLNYTRGVCSLDTIIYRTNANQFARLAEECIVLEDNKYRLYRPIWITSP-------EDSAQPLCEPTPGNLLYESGEVY-ESLHGKGAQAARELDQLIRTMRAHSYKSNGDVNRSFISMQITSKDIVGKFPYRMRDTEYFTSAVFIKLLGKTGVKCIGTVY-GRHGEGMMRVMMLACTNGFTENGTLSYAQGTGLVEMDVGD----VDGNWSTIIAVESRRFVYQFARGVVGEQFQT--NAVAYAAFLAVSRAEDKINVNKYAIAYRNCKQLSVPSRNPESWVESIPFYRSEPRITATVELWAIIVLVCWLVVVTAARILLHAVANHKGMPNRLLGEQQMVCRWVEEKEREKLSGEGNDSIEPCKRGYLSVENGDFKDCITAT 476          
BLAST of Ggra10790.t1 vs. uniprot
Match: A0A2V3IVB8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVB8_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 2.110e-87
Identity = 173/497 (34.81%), Postives = 278/497 (55.94%), Query Frame = 0
Query:    1 MAIRTNISVSVFNIIRYLILGTGLDFIVRRSLDSFEHFRRRLSLYRGHSVSVAGHRIDRYNTLKVLTTGHLLSGSVLLLVSALAYTAELALEYAVDSSAIRYAIPGNVTRVEQREGVCSREEMIASGNALDIAFIADQCVKLEDNTYSFYRPVWVKSTSSKDRVNDDGLRVLCEAVEGNIMYEGDGIYGPSTTGKRSPEVLE---LIQMLSENSYKTVGDKFLPLFVIKVSSSDIL-QTLWFATPSEQFSLSVFYANITGSSVQCMGSIIAGVERQDTSVVQVV--ACMDGFDEDSSLVLTSGSSFIEVESDDDADGVSNAWSTLVAFEIRTRIPRFFKGIRADDSSSRANAEGYSSFLARSFPQDVVTLNKYAIAYRFCDDIPLPVRNGTFWEEEYEFASSEVRVTATVEEWAIVLAVCWVMVVTVAHLLVSLVAARKNMPDKVLGEQDILLRWAAENEGKQMEGRGTV----------ALLSVEGGAKGGRITAT 481
            M + TN++V +FN+++YL +   +D IVR  LDSFEHF+RR SLYRG+SV+    RIDRYN L+ ++  H      L++++  AY  E+ LE+A +S + R  I G VTR+   E +C  + +I  GN   +  +AD+C+  E+  Y  YRP+W+ +            + LCE   GN++ E   +Y  S  GK     LE   L +++ ++SYK   ++    F + ++S++++ ++L   + S+ F  +VF   +  +SV+C G++     R+ + +++++  AC++G +++S+L    G+S +E     D   +   WST++A E R  + RF +G+   D   + NA  Y++F+A + PQD + LNKYAIAYR C+ + LP RN   WEE    +SS  +  ATVE WA++L + WV++VTV+  LV   A R  MP+++ GE  I+  W  +   KQ E R               LSVE G     ITAT
Sbjct:    1 MELNTNLAVPIFNVLKYLFITIAIDGIVRNGLDSFEHFQRRWSLYRGYSVTFQATRIDRYNLLQQISKKHFSLSITLVILTLAAYAVEIGLEFATNSRSTRVPIAGKVTRLNYTENICGLDTIIYPGNIERLINLADKCIIFENEMYRLYRPIWITNPEVP-------FQPLCEPTPGNLLAESMEVYD-SLEGKGEEAALEIEKLRRIMHDHSYKANAEEGRSFFTLSINSTNVIAKSLHQTSSSDVFLYAVFMKPLGDTSVKCYGNVYG---RRGSGMMRLMMFACVNGLNQNSTLAYALGTSLVEK----DVGEIDKDWSTVIAVENRRSVYRFARGVI--DDRLQTNAAAYAAFIADARPQDKIRLNKYAIAYRNCEQLSLPSRNAESWEEHISASSSRPQNVATVELWALILVLAWVIIVTVSRFLVHSAADRMGMPNRIFGEHQIVCLWLKD---KQKERRADYDDNSVETYKKGYLSVENGELKDSITAT 477          
BLAST of Ggra10790.t1 vs. uniprot
Match: A0A2V3IIK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIK5_9FLOR)

HSP 1 Score: 283 bits (725), Expect = 9.920e-87
Identity = 177/491 (36.05%), Postives = 273/491 (55.60%), Query Frame = 0
Query:    1 MAIRTNISVSVFNIIRYLILGTGLDFIVRRSLDSFEHFRRRLSLYRGHSVSVAGHRIDRYNTLKVLTTGHLLSGSVLLLVSALAYTAELALEYAVDSSAIRYAIPGNVTRVEQREGVCSREEMIASGNALDIAFIADQCVKLEDNTYSFYRPVWVKSTSSKDRVNDDGLRVLCEAVEGNIMYEGDGIY----GPSTTGKRSPEVLELIQMLSENSYKTVGDKFLPLFVIKVSSSDILQTLWFATPSEQFSLSV-FYANITGSSVQCMGSIIAGVERQDTSVVQVVACMDGFDEDSSLVLTSGSSFIEVESDDDADGVSNAWSTLVAFEIRTRIPRFFKGIRADDSSSRANAEGYSSFLARSFPQDVVTLNKYAIAYRFCDDIPLPVRNGTFWEEEYEFASSEVRVTATVEEWAIVLAVCWVMVVTVAHLLVSLVAARKNMPDKVLGEQDILLRWAAENEGKQMEGRGTV-----ALLSVEGGAKGGRITAT 481
            M + T++ V VFN+++YL++    D +VR  LDSFEHFRRRLS YRG+SV     RIDRYN L  ++    LS   LL ++  AY  E++LE+A DS A+R+ I GNV R+    GVCS + ++   NA   A +A++CV LE+  Y  YRP+W+ S     +        LCE    N++YE   +Y    G     KR  E+ EL++ +S +SYK+ GD    +  ++++S D++             +S  F   ++ + V+C G++  G   +    + ++AC +GF E+S++    G+  +E++ +D    +   WST++A + R  + +F + +  +   +  NA  ++ FLA S  QD + +NKYAIAYR C  + +P RN   W E    ++SE+R TATV+ WAIV  VCW++VVT A +L+  VA  + MP+++ GEQ I+  W  E   K  E    +     A LSVE G     ITAT
Sbjct:    1 MELHTSLPVPVFNVLKYLLIALATDGVVRNGLDSFEHFRRRLSFYRGYSVQFETTRIDRYNVLHRISFRDFLS-LFLLFITLAAYGVEISLEFATDSRAVRFRIAGNVRRLNFTRGVCSLDTILYQENANRFARLAEECVVLENGMYRLYRPIWIISPEKTPQP-------LCEPTSENLLYESKEVYHALEGKGEQAKR--EIKELLRTMSLHSYKSNGDAKRAVISMRITSKDVVGKFVHEDADALPIISAAFIKRLSKTGVKCFGTV-RGRHGEGMMRLAMLACTNGFTENSTMSYAEGTGLVEIDVED----IDKEWSTIIAVDNRRSLYQFARKVVRERLEN--NAVAFAVFLAESRAQDKINVNKYAIAYRNCRKLSVPSRNPESWIENVPISNSELRTTATVKLWAIVTLVCWLVVVTAARILLHAVANHRGMPNRLFGEQQIVCLWVEE---KDRENHDCIEKCRRAYLSVETGYFKDHITAT 471          
BLAST of Ggra10790.t1 vs. uniprot
Match: A0A2V3INI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI7_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 1.790e-35
Identity = 114/458 (24.89%), Postives = 207/458 (45.20%), Query Frame = 0
Query:    1 MAIRTNISVSVFNIIRYLILGTGLDFIVRRSLDSFEHFRRRLSLYRGHSVSVAGHRIDRYNTLKVLTTGHLLSGSVLLLVSALAYTAELALEYAVDSSAIRYAIPGNVTRVEQREGVCSREEMIASGNALDIAFIADQCVKL--EDNTYSFYRPVWVKSTSSKDRVNDDGLRVLCEAVEGNIMYEGDGIYGPSTTGKRSPEVLELIQMLSENSYKTVGDKFLPLFVIKVSSSDILQTLWFATPSEQFSLSVFYANITGSSVQCMGSIIAGVERQDTSVVQVVACMDG---FDEDSSLVLTSGSSFIEVESDDDADGVSNAWSTLVAFEIRTRIPRFFKGIRADDSSSRANAEGYSSFLARSFPQDVVTLNKYAIAYRFCDDIPLPVRNGTFWEEEYE-FASSEVRVTATVEEWAIVLAVCWVMVVTVAHLLVSLVAARKNMPDKVLGEQDILLRWAAE 452
            M I +NIS+ VF++++Y+I+ + +D +VR  +++   F R+ S+  G SV + G   DR++              +++L+S   Y  EL LE++ DS  +  + P  +    +  G C+  E+     A  ++ + + CV    ED  Y+ Y P+WV+            + + C   + N +     +Y      +   +    +  + ++SY   GDK   L  I   S+D+L           F        I  +++ C+G++   +        ++  C++G    ++ +  +   GS+ I     +DA  ++  W   +A      I  F KGI    S      E Y +FL  +  QDV ++ +YAI Y++CD I +P RN   WE   E  A S   V   V++WAI+L V W + + +   L  L +  + +P  V GE +I ++W ++
Sbjct:    1 MVILSNISLPVFSVLKYIIVFSFIDVLVRVCINNLNTFCRKYSISNGRSVPIGGTAFDRFSVSSHSFPKLSFLSMIVVLISLFTYAIELILEFSTDSFVVNISKPEVLEVQVENHGTCTLGEVTDVLAAEYMSQVGNNCVVYSEEDQMYTLYAPLWVREGGR--------IALRCIQTDDNELAREAALYANENLARVQSD---FVDEMRKHSYGANGDKNRYLITITARSTDVLAAAKRTQRDGNFVTGPLVVKIPNTAISCIGNVHGRIGDGQMKA-ELHFCLNGGWPSNDQTDFIYMLGSALIP----EDAKSMNADWEVKIAISHGREIKDFGKGIV---SGGLFRYEAYGAFLGLTTNQDVHSIQRYAIVYKYCDVIKIPGRNS-IWERRLEPKAKSVSSVRVQVKDWAIILIVSWPLFLCILVGLTQLYSRGRELPQMVSGEDNIAMQWYSD 438          
The following BLAST results are available for this feature:
BLAST of Ggra10790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IIK33.750e-9838.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVB82.110e-8734.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIK59.920e-8736.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INI71.790e-3524.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 33..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 432..485
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 407..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 14..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..85
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 407..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000225_piloncontigtig00000225_pilon:42257..43714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10790.t1Ggra10790.t1Gracilaria gracilis GNS1m malemRNAtig00000225_pilon 42257..43714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10790.t1 ID=Ggra10790.t1|Name=Ggra10790.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=486bp
MAIRTNISVSVFNIIRYLILGTGLDFIVRRSLDSFEHFRRRLSLYRGHSV
SVAGHRIDRYNTLKVLTTGHLLSGSVLLLVSALAYTAELALEYAVDSSAI
RYAIPGNVTRVEQREGVCSREEMIASGNALDIAFIADQCVKLEDNTYSFY
RPVWVKSTSSKDRVNDDGLRVLCEAVEGNIMYEGDGIYGPSTTGKRSPEV
LELIQMLSENSYKTVGDKFLPLFVIKVSSSDILQTLWFATPSEQFSLSVF
YANITGSSVQCMGSIIAGVERQDTSVVQVVACMDGFDEDSSLVLTSGSSF
IEVESDDDADGVSNAWSTLVAFEIRTRIPRFFKGIRADDSSSRANAEGYS
SFLARSFPQDVVTLNKYAIAYRFCDDIPLPVRNGTFWEEEYEFASSEVRV
TATVEEWAIVLAVCWVMVVTVAHLLVSLVAARKNMPDKVLGEQDILLRWA
AENEGKQMEGRGTVALLSVEGGAKGGRITATLKRA*
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