Ggra10623.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10623.t1
Unique NameGgra10623.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length155
Homology
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BLAST of Ggra10623.t1 vs. uniprot
Match: A0A2V3J3X7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X7_9FLOR)

HSP 1 Score: 179 bits (455), Expect = 5.730e-54
Identity = 87/154 (56.49%), Postives = 118/154 (76.62%), Query Frame = 0 
Query:    1 MPIEDRAKDEEVTVWLVASKEKGGILLRGRAKGYLKRSCDRCGSVYDEVSDGIFDVLLKSELGEIDDSLYDDVQTVDSDEIEVSGHVRDALYLGMQSRALCKDDCAGLGINQQTEDGLAFEDMDDEADEGGTIAQLAAGNALLEMKKRLEQKGI 154
            MP EDRA DE+V VWLVA++ KGG+LLRGRAKG+LKR CDRCG+ ++E++DG FDVLL     E+D+SL++DVQTV+SDEIE+S HVRDALYLG++SRA+C + C G+ + Q  E    F+  D   D   TI   +AG+ L+EMK++LE++G+
Sbjct:  101 MPKEDRADDEQVGVWLVATRAKGGLLLRGRAKGWLKRMCDRCGNSFEELADGTFDVLLNEGEEEVDESLFEDVQTVESDEIEMSRHVRDALYLGLKSRAICNEQCGGVSV-QNGEQWSVFKSGDQRIDAEETIGDRSAGDRLMEMKRKLEERGL 253
The following BLAST results are available for this feature:
BLAST of Ggra10623.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3X75.730e-5456.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003772Large ribosomal RNA subunit accumulation protein YceDPFAMPF02620YceDcoord: 27..127
e-value: 3.8E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:414943..415407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10623.t1Ggra10623.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 414943..415407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10623.t1 ID=Ggra10623.t1|Name=Ggra10623.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=155bp
MPIEDRAKDEEVTVWLVASKEKGGILLRGRAKGYLKRSCDRCGSVYDEVS
DGIFDVLLKSELGEIDDSLYDDVQTVDSDEIEVSGHVRDALYLGMQSRAL
CKDDCAGLGINQQTEDGLAFEDMDDEADEGGTIAQLAAGNALLEMKKRLE
QKGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003772YceD