Ggra10575.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10575.t1
Unique NameGgra10575.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length240
Homology
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A2V3IXU1 (Protein YIPF n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXU1_9FLOR)

HSP 1 Score: 382 bits (981), Expect = 1.260e-132
Identity = 195/227 (85.90%), Postives = 210/227 (92.51%), Query Frame = 0
Query:    1 MADLAQQFGENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHDQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLIGFQRGSVPHAAVAEGTLPSNGTAAPVSE-GSRML 226
            MADLAQQFGE TI+EPVSETI RDLRLVGRRLLMV+IP+ISSSEKRAELRDWDLWGP FLCMSLAVMLS+T HD+ASVVFSVIFVIVWVGAAVITVNGQLLGG+LSFFQSVCLLGYCIFPILLSAVACW INSFV NDLAV+ RFVSV+++LLWSIWASSSFMTDA+FPEGRKLLALYPV+LFYLSLAWIVLIGFQRGSVP+A VAEG++P N TA    E G R L
Sbjct:    1 MADLAQQFGETTIDEPVSETILRDLRLVGRRLLMVVIPTISSSEKRAELRDWDLWGPLFLCMSLAVMLSVTDHDEASVVFSVIFVIVWVGAAVITVNGQLLGGKLSFFQSVCLLGYCIFPILLSAVACWAINSFVINDLAVVMRFVSVLIALLWSIWASSSFMTDAKFPEGRKLLALYPVLLFYLSLAWIVLIGFQRGSVPNAVVAEGSVPKNVTAGSAPEQGERFL 227          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A1X6PJQ2 (Protein YIPF n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PJQ2_PORUM)

HSP 1 Score: 272 bits (695), Expect = 4.960e-89
Identity = 138/209 (66.03%), Postives = 172/209 (82.30%), Query Frame = 0
Query:   11 NTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHDQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLIGFQRGSVPHAAVAEGTLPSNGTAAPV 219
            +TI+EPVSETI RD+RLVGRRL +VM+P +S+S + A LRDWDLWGP F+CMSLAV+LS+ +  + S++FS+IFVIVW GAAV+T+NGQLLGGRL+FF SVCLLGYCI P+L++A  C ++N+ V   +AV+ RF  V+  L WS+WASSSFM DA FPEGRKLLALYPV+LFYLSLAW+VLIGFQ+G  P AAV+  TLP+   AAPV
Sbjct:   23 STIDEPVSETILRDVRLVGRRLSLVMLPGVSASARSAALRDWDLWGPLFVCMSLAVLLSVESSGEGSLLFSLIFVIVWAGAAVVTINGQLLGGRLAFFGSVCLLGYCIAPLLVAAGGCALVNATVGGGVAVVVRFALVVTGLAWSVWASSSFMADAAFPEGRKLLALYPVLLFYLSLAWMVLIGFQQG--PSAAVS--TLPA--AAAPV 225          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A5J4YZP8 (Protein YIPF n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZP8_PORPP)

HSP 1 Score: 229 bits (585), Expect = 9.350e-73
Identity = 111/210 (52.86%), Postives = 155/210 (73.81%), Query Frame = 0
Query:    9 GENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHDQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLIGFQRGSVPHAAVAEGTLPSNGTAAP 218
            G+ TI+E V+ ++FRD+ LV RR+ +V +P +SS   RAELRDW+LWGP F+CMSLAV+LS+ A D ASVVFS++F+IVWVG+A++T+N QLLG R+SFFQ+VCLLGYC+FP+L+S+  C I N F+   LAV+ RF  V  S+LWSI A+  F++DA  P G+  LALYPVVLF+ S+ W++L+GFQ+        +   + +   A+P
Sbjct:    7 GDFTIDESVAASVFRDIALVARRMGLVFLPGLSSL--RAELRDWELWGPLFICMSLAVILSVQATDAASVVFSIVFLIVWVGSAIVTMNAQLLGARISFFQTVCLLGYCVFPLLISSSLCLIFNHFLTRSLAVVLRFSVVAFSILWSILAAGGFLSDAEIPPGKLGLALYPVVLFFFSIGWLILLGFQQDQQTQQPQSGPAVGAGSQASP 214          
BLAST of Ggra10575.t1 vs. uniprot
Match: M2WTE6 (Protein YIPF n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WTE6_GALSU)

HSP 1 Score: 224 bits (571), Expect = 5.850e-71
Identity = 101/188 (53.72%), Postives = 146/188 (77.66%), Query Frame = 0
Query:   10 ENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHDQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLIGFQR 197
            E+T++EPV  TI RDL L+GRRL +V++P +++ E +AELRDWDLWGP F+CM+LA +LS+ A + AS++FS++F+I+W G+ V+T+N QLLGG +SFF  VCLLGYC+FP+L+ A  C    + +   +AV+ RFV+V++ L+WSI A ++F  D + PEGRKLLA+YPV LFY  +AW++L+GFQ 
Sbjct:    6 ESTLDEPVWSTIKRDLGLIGRRLKLVILPKVTAVEMQAELRDWDLWGPLFICMTLATVLSVEASEDASLIFSLVFLIIWCGSFVVTLNAQLLGGAVSFFMGVCLLGYCVFPLLVGAFFCIFWTAVLPTGVAVVLRFVTVVLLLIWSIMAVTAFFADVKLPEGRKLLAVYPVFLFYSGIAWMILVGFQE 193          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A0P1ABD2 (Protein YIPF n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ABD2_PLAHL)

HSP 1 Score: 187 bits (474), Expect = 4.200e-56
Identity = 96/184 (52.17%), Postives = 134/184 (72.83%), Query Frame = 0
Query:   11 NTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAH-DQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            NT++EPVS TI RDLRLVG +L +V++PS +S E    LRDWDLWGP  LC++L++MLSITA   Q+++VF+ +F++VWVGAAV+T+N QLLG  +SFFQSVC+LGYC+FP+ ++ + C +    V +   ++ R V V +  LWS  AS  FM+    P  RK L +YPV+LFYL ++W+VLI
Sbjct:   27 NTLDEPVSTTILRDLRLVGGKLRVVLMPSNTSEETLKALRDWDLWGPLLLCLTLSIMLSITAPVSQSAMVFTGVFIVVWVGAAVVTINAQLLGSAISFFQSVCVLGYCVFPLNIATLMCMLTKVVVPH---ILLRMVIVSIGFLWSTRASVVFMSKLV-PPKRKALTVYPVLLFYLLISWMVLI 206          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A1V9Z1I2 (Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z1I2_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.640e-55
Identity = 91/184 (49.46%), Postives = 138/184 (75.00%), Query Frame = 0
Query:   11 NTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAH-DQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            NT++EPVSETI RD+RLVG +L +V+ P  +S E    LRDWDLWGP  +C++L++MLS+TA  +Q+++VF+ +FV+VWVGAAV+T+N QLLG  +SFFQS+C+LGYC+FP++++ +AC++    V + +A+  R V V +  +WS  AS  FM+    P  +K L +YPV+LFY+ ++W++LI
Sbjct:   15 NTLDEPVSETIMRDVRLVGSKLKVVLAPKNTSDETLQALRDWDLWGPLMVCLTLSIMLSMTAPTNQSAMVFTSVFVVVWVGAAVVTINAQLLGSTISFFQSICVLGYCVFPLVIATIACFL-TRVVSSHVAI--RLVFVGIGFIWSTRASVVFMSQLV-PPKKKALTVYPVLLFYIFISWMILI 194          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A5D6XUL7 (Protein YIPF n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUL7_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.830e-55
Identity = 96/185 (51.89%), Postives = 133/185 (71.89%), Query Frame = 0
Query:   10 ENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAH-DQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            ENT++EPVSETI RD+RLV  +L +V++P  +S E    LRDWDLWGP  LC+SL++MLS+TA   Q+++VF+ +FV+VW GAAV+T+N QLLG  +SFFQSVC+LGYC+FP+ ++ + C ++   V +   V  R + V V  LWS  AS  FM+    P  RK L +YPV+LFYL ++W+VLI
Sbjct:   30 ENTLDEPVSETILRDVRLVAGKLRVVLVPRNTSEETLKALRDWDLWGPLMLCLSLSIMLSMTAPAHQSAMVFTGVFVVVWAGAAVVTINAQLLGSTISFFQSVCVLGYCVFPLNIATLLCMVLGVVVSH---VALRLLIVGVGFLWSTRASVVFMSTLV-PPKRKALTVYPVLLFYLFISWMVLI 210          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A067CCZ0 (Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCZ0_SAPPC)

HSP 1 Score: 183 bits (465), Expect = 6.610e-55
Identity = 91/185 (49.19%), Postives = 138/185 (74.59%), Query Frame = 0
Query:   10 ENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAH-DQASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            ENT++EPVSETI RD+RLVG +L +V++P  +S E    LRDWDLWGP  +C+ L+++LS+TA  +Q+++VF+ +FV+VWVGAAV+TVN QLLG  +SFFQS+C+LGYC+FP++++ +AC++    V + + +  R + V V  +WS  AS  FM+    P  +K L +YPV+LFY+ ++W++LI
Sbjct:   14 ENTLDEPVSETILRDVRLVGSKLKVVLMPRNTSDETLQALRDWDLWGPLMVCLMLSILLSLTAPANQSAMVFTSVFVVVWVGAAVVTVNAQLLGSTISFFQSICVLGYCVFPLVIATLACFL-TRVVSSHVTI--RLILVGVGFVWSTRASVVFMSQLV-PPKKKALTVYPVLLFYIFISWMILI 194          
BLAST of Ggra10575.t1 vs. uniprot
Match: M4BIG2 (Protein YIPF n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIG2_HYAAE)

HSP 1 Score: 183 bits (464), Expect = 1.360e-54
Identity = 93/184 (50.54%), Postives = 134/184 (72.83%), Query Frame = 0
Query:   11 NTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHD-QASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            NT++EPVS+TI RDLRLVG +L +V++PS +S E    LRDWDLWGP  LC++L++MLS+TA   Q+++VF+ +FV++W+GAA++TVN QLLG  +SFFQSVC+LGYC+FP+ ++ + C +    + +   ++ R   V V  LWS  AS  FM+    P  RK L +YPV+LFYL ++W+VLI
Sbjct:   27 NTLDEPVSDTILRDLRLVGGKLRVVLMPSNTSEETLKALRDWDLWGPLLLCLTLSIMLSVTAPAAQSAMVFTGVFVVIWMGAAIVTVNAQLLGSSISFFQSVCVLGYCVFPLNIATLVCMLTRVAISH---ILLRVFVVGVGFLWSTRASVVFMSKLV-PPKRKALTVYPVLLFYLVISWMVLI 206          
BLAST of Ggra10575.t1 vs. uniprot
Match: A0A1R2AL81 (Protein YIPF n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2AL81_9CILI)

HSP 1 Score: 182 bits (461), Expect = 3.520e-54
Identity = 92/185 (49.73%), Postives = 131/185 (70.81%), Query Frame = 0
Query:   11 NTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELRDWDLWGPFFLCMSLAVMLSITAHDQ--ASVVFSVIFVIVWVGAAVITVNGQLLGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIVSLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLI 193
            N++EEPVS TI R+L+ +G +L  VMIP IS  EK  ELRDWDLWGP  LC+ LA+ LS+++ D    +++F ++FV+VW+G+AV+T+N QLLGG +SFF SVCLLGYC+FP+ ++A    ++ +F+ N + V+     V++ L WS ++S  FM     P  RK LA YPV+LFYL LAW +L+
Sbjct:   24 NSLEEPVSTTILRELKRIGYKLRCVMIPKISEDEKSKELRDWDLWGPLLLCLMLALTLSLSSDDDNTGTMIFGIVFVVVWIGSAVVTINAQLLGGTVSFFHSVCLLGYCLFPLNVAA----LVLAFIGN-IGVVINLALVVLGLGWSTFSSIGFMAGLV-PSTRKALAEYPVLLFYLFLAWFILV 202          
The following BLAST results are available for this feature:
BLAST of Ggra10575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXU11.260e-13285.90Protein YIPF n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A1X6PJQ24.960e-8966.03Protein YIPF n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A5J4YZP89.350e-7352.86Protein YIPF n=1 Tax=Porphyridium purpureum TaxID=... [more]
M2WTE65.850e-7153.72Protein YIPF n=1 Tax=Galdieria sulphuraria TaxID=1... [more]
A0A0P1ABD24.200e-5652.17Protein YIPF n=1 Tax=Plasmopara halstedii TaxID=47... [more]
A0A1V9Z1I21.640e-5549.46Protein YIPF n=1 Tax=Thraustotheca clavata TaxID=7... [more]
A0A5D6XUL73.830e-5551.89Protein YIPF n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A067CCZ06.610e-5549.19Protein YIPF n=3 Tax=Saprolegniaceae TaxID=4764 Re... [more]
M4BIG21.360e-5450.54Protein YIPF n=1 Tax=Hyaloperonospora arabidopsidi... [more]
A0A1R2AL813.520e-5449.73Protein YIPF n=1 Tax=Stentor coeruleus TaxID=5963 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 37..190
e-value: 6.0E-18
score: 65.3
NoneNo IPR availablePANTHERPTHR21236:SF1PROTEIN YIPF6coord: 11..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..239
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 78..101
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 54..73
NoneNo IPR availableTMHMMTMhelixcoord: 174..196
NoneNo IPR availableTMHMMTMhelixcoord: 78..100
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
IPR045231Protein Yip1/4-likePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 11..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000904_piloncontigtig00000904_pilon:297156..298226 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10575.t1Ggra10575.t1Gracilaria gracilis GNS1m malemRNAtig00000904_pilon 297156..298226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10575.t1 ID=Ggra10575.t1|Name=Ggra10575.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=240bp
MADLAQQFGENTIEEPVSETIFRDLRLVGRRLLMVMIPSISSSEKRAELR
DWDLWGPFFLCMSLAVMLSITAHDQASVVFSVIFVIVWVGAAVITVNGQL
LGGRLSFFQSVCLLGYCIFPILLSAVACWIINSFVKNDLAVIFRFVSVIV
SLLWSIWASSSFMTDARFPEGRKLLALYPVVLFYLSLAWIVLIGFQRGSV
PHAAVAEGTLPSNGTAAPVSEGSRMLLRDDYLNVRDRVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1_dom
IPR045231Yip1/4-like