Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10568.t1.stop1 | Ggra10568.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000904_pilon 218198..218200 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra10568.t1.start1 | Ggra10568.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000904_pilon 219344..219346 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=383bp
MTWPWPTTPHLALTQQPPQIQNPPLPYLPPPPPPPPIAQLLPPVNLYPTV
PIPAAPSSFGQISAPSSQIHQTDYYNANPPYITPHHNVSSERNHSQFQPG
YNQQRRLNRRQSVRHRDGRSRSVNMPRMQDASRAASFQQRSNKKQQASDQ
NPAQEVLTRLNAKLPGSSPADIETWVNARKANWPSKANVARKEAAAMKRQ
KAGALDTTSHNASQVRHRSDCTQRDLDTSRNVLSRLHAKLPGSSPEEIEA
WVKARKANWPSRANVERKLAAAAAKNETKSTMREADIASGAMAKLADYSS
SDDDDEKLEGKRKTDHTNRGKRIRKRQGGRGKGKNSRRKQVQTSDRKPTL
LRMLLEREIRQEQSVLLQAFRYIVTKKAFEMA* back to topspliced messenger RNA >Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA back to topprotein sequence of Ggra10568.t1 >Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=383bp
MTWPWPTTPHLALTQQPPQIQNPPLPYLPPPPPPPPIAQLLPPVNLYPTV
PIPAAPSSFGQISAPSSQIHQTDYYNANPPYITPHHNVSSERNHSQFQPG
YNQQRRLNRRQSVRHRDGRSRSVNMPRMQDASRAASFQQRSNKKQQASDQ
NPAQEVLTRLNAKLPGSSPADIETWVNARKANWPSKANVARKEAAAMKRQ
KAGALDTTSHNASQVRHRSDCTQRDLDTSRNVLSRLHAKLPGSSPEEIEA
WVKARKANWPSRANVERKLAAAAAKNETKSTMREADIASGAMAKLADYSS
SDDDDEKLEGKRKTDHTNRGKRIRKRQGGRGKGKNSRRKQVQTSDRKPTL
LRMLLEREIRQEQSVLLQAFRYIVTKKAFEMA* back to topmRNA from alignment at tig00000904_pilon:218198..219346- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA back to topCoding sequence (CDS) from alignment at tig00000904_pilon:218198..219346- >Ggra10568.t1 ID=Ggra10568.t1|Name=Ggra10568.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1149bp|location=Sequence derived from alignment at tig00000904_pilon:218198..219346- (Gracilaria gracilis GNS1m male)
ATGACTTGGCCATGGCCTACCACCCCACATCTTGCTCTCACGCAGCAACC
ACCTCAAATCCAGAACCCACCACTGCCTTATTTACCCCCACCTCCACCAC
CTCCACCCATAGCACAACTGTTGCCACCAGTCAACCTTTACCCGACCGTT
CCTATCCCAGCCGCGCCATCCAGCTTCGGACAGATCTCAGCACCCTCTTC
TCAGATACACCAGACCGATTATTACAACGCGAATCCGCCTTACATTACCC
CACACCATAACGTATCATCCGAACGGAATCACTCGCAGTTTCAACCAGGA
TACAACCAACAGCGACGATTGAACCGCCGTCAGTCGGTTCGTCATAGAGA
TGGAAGAAGTCGCAGCGTTAACATGCCTCGAATGCAAGATGCTTCAAGAG
CTGCAAGTTTTCAGCAGCGAAGTAACAAGAAACAACAAGCAAGTGACCAG
AACCCTGCACAAGAGGTACTTACACGGTTAAACGCCAAGCTCCCTGGATC
ATCACCTGCTGACATAGAAACATGGGTGAACGCAAGGAAAGCTAACTGGC
CAAGTAAGGCAAACGTAGCGCGAAAGGAAGCTGCTGCTATGAAACGTCAG
AAAGCAGGTGCCCTTGATACTACATCCCATAATGCTTCCCAGGTTAGACA
TAGATCCGACTGTACACAACGGGATTTGGATACATCTCGAAACGTCCTCT
CCCGACTCCACGCAAAGTTGCCCGGTTCATCTCCTGAGGAAATCGAAGCC
TGGGTGAAAGCCCGGAAAGCAAACTGGCCTAGTCGGGCTAATGTTGAGAG
AAAATTAGCAGCTGCAGCAGCTAAGAACGAGACGAAATCGACGATGAGAG
AGGCGGACATTGCTTCGGGAGCAATGGCAAAACTGGCGGACTACAGCAGT
AGTGACGATGATGATGAAAAGCTTGAGGGAAAACGCAAAACAGACCACAC
GAATCGTGGGAAACGGATTCGGAAGAGGCAAGGTGGACGAGGAAAAGGCA
AGAACTCAAGGAGAAAGCAAGTGCAGACCTCAGATCGGAAACCGACTTTA
CTGAGAATGCTTCTAGAAAGAGAGATTAGACAAGAGCAATCAGTTCTGTT
GCAAGCATTTCGTTACATAGTCACCAAGAAGGCTTTTGAAATGGCTTAA back to top
|