Ggra10455.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10455.t1
Unique NameGgra10455.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length423
Homology
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A2V3J4X9 (Arf-GAP domain and FG repeat-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X9_9FLOR)

HSP 1 Score: 260 bits (665), Expect = 3.250e-77
Identity = 329/640 (51.41%), Postives = 340/640 (53.12%), Query Frame = 0
Query:    1 MARRISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPPGDVER-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKTPAFAGTIDDLISQNNAS-APSM--GSGPASFGNVIQTPMGPAVMTPQGLMPPAMAAQMMQRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGMDQMGGXXXXXXXXXXXXXXXXXXXMGANMNGGMGGMGMGXXXXXXXXXXPXXXXMGXXXGGMAPTHPAPLALPAXXXXXXXXXXXXXXXDDVLNSLGPIQTLNISDNPPRPMGAGGMNGGMMGSGA----------GXXMGMNGMM--------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAAANPFGAAAASGAASTNPFDDF 422
            MARRISAREAEDAERK+RQL R+GANRYCADCGDS+PN+VVLSLGTFVCS+CA IHRDA RRGVRN+DSA FSI+DAYRM DRGND ARKRWMARWSPRDFPEPPPGD ER                                                                                                                                                                                                     KKTPAFAGTIDDLISQN+A+ A SM  G+G ASFGNVIQTPMGPAVMTPQGLMPPAMAAQMMQRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       GMG D    XXXXXXXXXXXXXXXXXXX       GMG MG  XXXXXXXXXX XXXX  XXX        APLALPA  XXXXXXXXXXX   DVLN+LGPIQTLNISDNPPR MGA GMNG M G             G    MNGM         G  XXXX                XXXXXXXXXX  NA  NPFGAAAASG ASTNPFDDF
Sbjct:    1 MARRISAREAEDAERKIRQLCRSGANRYCADCGDSSPNYVVLSLGTFVCSICAGIHRDANRRGVRNIDSATFSIDDAYRMHDRGNDLARKRWMARWSPRDFPEPPPGDTERIREFIWLKYDGSWASKNMTAPPSRRDDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDRPRDRYXXXXXXXXXYRPPAPRGRSDRDYYPDKSRDRDYYDRDDRGRRSRYDEYEDEDDYRRPKADKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKTPAFAGTIDDLISQNSATPAASMAAGAGSASFGNVIQTPMGPAVMTPQGLMPPAMAAQMMQRGGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GMGTDXXXXXXXXXXXXXXXXXXXXXXX-------GMGAMGXXXXXXXXXXXXXXXXXXXXXXXXXKANVGAPLALPAPPXXXXXXXXXXX---DVLNALGPIQTLNISDNPPRAMGAAGMNGTMGGGXXXXXXXXXXXXGGGAXMNGMXXXXXXXNXGMDXXXXNGTMGGMDETGGAGVGXXXXXXXXXXXXNA--NPFGAAAASGGASTNPFDDF 621          
BLAST of Ggra10455.t1 vs. uniprot
Match: R7QBH2 (Arf-GAP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBH2_CHOCR)

HSP 1 Score: 192 bits (489), Expect = 9.930e-52
Identity = 88/110 (80.00%), Postives = 100/110 (90.91%), Query Frame = 0
Query:    1 MARRISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPPGDVE 110
            MARR+S REAEDAERKLRQL+RAG NRYCADCG S+PNHVVL+LGTFVC +CA IHRDA R+GVRN+DSA FS++DAYRMEDRGND AR+RWMARWSP+D+PEP PGD E
Sbjct:    1 MARRVSPREAEDAERKLRQLSRAGGNRYCADCGASSPNHVVLALGTFVCPLCAGIHRDASRKGVRNIDSATFSMDDAYRMEDRGNDLARRRWMARWSPKDYPEPQPGDKE 110          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A1X6NPP4 (Arf-GAP domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPP4_PORUM)

HSP 1 Score: 140 bits (354), Expect = 2.790e-33
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0
Query:    1 MARRISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRG-NDFARKRWMARWSPRDFPEPPPGDVERKK 113
            M+RR S REAEDAER +R L R   NRYCADCGD +P HV L L TFVCS+C+ IHRDA RR V+++DS   +++D  R++ RG N  AR++WMARW+ RDFPEPPPGDVER +
Sbjct:    1 MSRRPSPREAEDAERSVRSLMRREGNRYCADCGDRSPMHVCLPLCTFVCSMCSGIHRDAGRR-VKHVDSGMLTMDDVDRLDVRGGNSGARQKWMARWNARDFPEPPPGDVERAR 113          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A5J4Z8V6 (Arf-GAP domain and FG repeat-containing protein 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8V6_PORPP)

HSP 1 Score: 114 bits (284), Expect = 9.680e-24
Identity = 54/100 (54.00%), Postives = 74/100 (74.00%), Query Frame = 0
Query:    9 EAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPPGD 108
            E E+AER +R +TR   N +CADCG   P  V L++GTFVCSVCA+ H+DA+RR V+N+++A F +EDA  +E RGN  A   ++A+W+PR+FPEP PGD
Sbjct:    6 EHEEAERLIRGMTRLEENAHCADCGARDPTFVNLTIGTFVCSVCADEHKDARRR-VKNIETATFMMEDAEFLEARGNAVANMHYLAKWNPREFPEPKPGD 104          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A7S1XAE2 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XAE2_9RHOD)

HSP 1 Score: 108 bits (270), Expect = 9.270e-23
Identity = 53/105 (50.48%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    5 ISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRG-NDFARKRWMARWSPRDFPEPPPGD 108
            +S R+ E+ E  LR L R  +NR CA+C D  P  VV+  G FVCS+CA +HR+  R  V+NL+S+  S+ +AY + D G N  AR++WMA+WS RDFPEP PGD
Sbjct:   16 MSHRDEEEVEYILRGLVREESNRTCAECDDRRPRFVVMDFGVFVCSLCAGVHREMGRT-VKNLESSPISVSEAYTISDMGGNAAARRKWMAKWSARDFPEPKPGD 119          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A7S3A5H2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5H2_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 1.310e-16
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    5 ISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPP 106
            ++ R  E+A R + +  R  AN +CA+CG  +  H  L+LG FVCSVCA IH D  RR +R+L     S+EDA R+ D GN  +R +WMA+++PRD+ EP P
Sbjct:    1 MAGRGGEEAFRIIDEELRDPANNHCAECGGEST-HANLTLGIFVCSVCAGIHADMNRR-IRSLGQDYISVEDAMRLVDIGNARSRMKWMAKYNPRDYDEPEP 100          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A7S3A7C4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7C4_9RHOD)

HSP 1 Score: 90.1 bits (222), Expect = 2.120e-16
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    5 ISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPP 106
            ++ R  E+A R + +  R  AN +CA+CG  +  H  L+LG FVCSVCA IH D  RR +R+L     S+EDA R+ D GN  +R +WMA+++PRD+ EP P
Sbjct:    1 MAGRGGEEAFRIIDEELRDPANNHCAECGGEST-HANLTLGIFVCSVCAGIHADMNRR-IRSLGQDYISVEDAMRLVDIGNARSRMKWMAKYNPRDYDEPEP 100          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A7S0G5H6 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5H6_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 3.170e-16
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    5 ISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEPPP 106
            ++ RE E+A R +    R  AN +CA+CG  +  H  L+LG FVC VCA IH D  RR VR+L     S+ DA R+ D GN  +R +WMA+++PRD+ EP P
Sbjct:    1 MAGREGEEAFRIIDNELRDPANNHCAECGGEST-HANLTLGIFVCPVCAGIHADMNRR-VRSLHQDYMSVGDAMRLVDIGNARSRMKWMAKYNPRDYEEPEP 100          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A2V3IVS5 (Arf-GAP domain and FG repeat-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVS5_9FLOR)

HSP 1 Score: 88.6 bits (218), Expect = 3.120e-15
Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MARRISAREAEDAERKLRQL-TRAGANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEP 104
            MA R  +R A+D E  LR +  R   N+YCADCG S P  + L++G+F+C +CA+ HR +  R ++++     + ED  RM+  GND   ++++A W  R+FP P
Sbjct:    1 MATRYVSRAAQDCEHALRDVQARLEGNQYCADCGVSHPEFINLTIGSFICDLCADFHRTSSNRRIKDVFGGDLTHEDVRRMDSVGNDVVNRKFLAVWDSREFPPP 105          
BLAST of Ggra10455.t1 vs. uniprot
Match: A0A7S1APG6 (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1APG6_NOCSC)

HSP 1 Score: 79.7 bits (195), Expect = 7.860e-14
Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   25 ANRYCADCGDSAPNHVVLSLGTFVCSVCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRDFPEP 104
            AN+ CADC +  P +V ++ GTFVC+ C+ +HR+   + V+ +  + FS+E+   +E  GN  A   WMARW PRD PEP
Sbjct:   22 ANKRCADCTELGPTYVCMTFGTFVCTTCSGLHREFSHK-VKGISVSKFSVEEVEELERGGNAKAFDIWMARWEPRDCPEP 100          
The following BLAST results are available for this feature:
BLAST of Ggra10455.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3J4X93.250e-7751.41Arf-GAP domain and FG repeat-containing protein 2 ... [more]
R7QBH29.930e-5280.00Arf-GAP domain-containing protein n=1 Tax=Chondrus... [more]
A0A1X6NPP42.790e-3361.40Arf-GAP domain-containing protein n=1 Tax=Porphyra... [more]
A0A5J4Z8V69.680e-2454.00Arf-GAP domain and FG repeat-containing protein 1 ... [more]
A0A7S1XAE29.270e-2350.48Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A7S3A5H21.310e-1646.08Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A7C42.120e-1646.08Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G5H63.170e-1646.08Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A2V3IVS53.120e-1539.05Arf-GAP domain and FG repeat-containing protein 2 ... [more]
A0A7S1APG67.860e-1443.75Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..23
NoneNo IPR availablePANTHERPTHR46085:SF3OS02G0208900 PROTEINcoord: 8..111
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 45..62
score: 35.44
coord: 64..85
score: 24.14
coord: 26..45
score: 36.21
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 14..134
e-value: 5.6E-5
score: 16.1
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 15..108
e-value: 1.1E-17
score: 64.2
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 14..92
score: 13.28293
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 4..120
e-value: 2.0E-19
score: 71.9
IPR044820ADP-ribosylation factor GTPase-activating protein AGD14-likePANTHERPTHR46085ARFGAP/RECO-RELATEDcoord: 8..111
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 14..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:353018..354853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10455.t1Ggra10455.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 353018..354853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10455.t1 ID=Ggra10455.t1|Name=Ggra10455.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=423bp
MARRISAREAEDAERKLRQLTRAGANRYCADCGDSAPNHVVLSLGTFVCS
VCANIHRDAKRRGVRNLDSAAFSIEDAYRMEDRGNDFARKRWMARWSPRD
FPEPPPGDVERKKTPAFAGTIDDLISQNNASAPSMGSGPASFGNVIQTPM
GPAVMTPQGLMPPAMAAQMMQRGGMGGGMGGMGTMNGMQGGMGGMSKMGM
PGGGMGGMGGMGAMNGMGGMGGGGMGMDQMGGGAGSSMGMGNQMGGGMGM
DMGANMNGGMGGMGMGGGMGMGGGMGPGMGMMGGMGGGMAPTHPAPLALP
APPPKDATGTGAGGDDDDVLNSLGPIQTLNISDNPPRPMGAGGMNGGMMG
SGAGMGMGMNGMMGGGAMNGTMGMNGTMGTGMNGSMGGGGGGGMMGAGNA
AANPFGAAAASGAASTNPFDDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR044820AGD14-like
IPR037278ARFGAP/RecO