Ggra10412.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10412.t1
Unique NameGgra10412.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length214
Homology
BLAST of Ggra10412.t1 vs. uniprot
Match: thioredoxin H2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C40FA (thioredoxin H2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C40FA)

HSP 1 Score: 72.4 bits (176), Expect = 8.890e-13
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:   90 LIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHM 173
            L+V+DF A+WC  C  +    S L   F  V FAKVDV+++  + R+F ++++PTFV V R +E+DR + A K  +    +RHM
Sbjct:   47 LLVIDFTASWCGPCKMMSPVFSGLAEKFTDVEFAKVDVDEVPDVAREFGVQAMPTFVLVKRGKEVDRIIGAKKDELERKIVRHM 130          
BLAST of Ggra10412.t1 vs. uniprot
Match: thioredoxin H5-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B784B02 (thioredoxin H5-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B784B02)

HSP 1 Score: 72.0 bits (175), Expect = 9.520e-13
Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 0
Query:   68 LLTLATPEQFDALAAQADAEGALIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHMLRTLISV 180
            +L+  T +QF       +++  L V+DF A WC  C ++   LS+    +  V F KVDV++++ +   F++ S+PTFVF+ + + +DRFV A+K +++     H  R+L  V
Sbjct:    4 VLSCQTLDQFKQNLEDGNSKK-LTVIDFTATWCAPCRFMAPILSEFANKYEDVLFLKVDVDELKTVAEDFKVDSMPTFVFLKQGKVVDRFVGANKESLLKLVTEHSGRSLPEV 115          
BLAST of Ggra10412.t1 vs. uniprot
Match: A0A8B8MU14 (thioredoxin H2 n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8MU14_9MYRT)

HSP 1 Score: 69.7 bits (169), Expect = 9.540e-12
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   90 LIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRH 172
            L+V+DF A+WC  C  +  A++ +   FA V FAK+DV+++  + R+F ++++PTFV V +  E+DR V A+K  +     RH
Sbjct:   44 LMVIDFAASWCGPCRMMEPAVNAMATQFADVEFAKIDVDELSDVAREFGVQAMPTFVLVKKGTEVDRIVGANKDELERKIQRH 126          
BLAST of Ggra10412.t1 vs. uniprot
Match: A0A803LKG6 (Thioredoxin domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LKG6_CHEQI)

HSP 1 Score: 69.3 bits (168), Expect = 1.000e-11
Identity = 34/110 (30.91%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   68 LLTLATPEQFDALAAQADAEGALIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHMLRTL 177
            +L+  T +QF       +++  L V++F A WC  C ++   LS+    +  V F KVDV++++ +   +++ S+PTFVF+   +E++RFV A+K  ++    +H  R+L
Sbjct:    4 VLSCQTLDQFKQNLEDGNSKK-LTVINFTATWCAPCRFMAPILSEFANKYEDVLFFKVDVDELKTIAEDYKVHSLPTFVFLKDGKEVNRFVGANKETLLKLVTKHSGRSL 112          
BLAST of Ggra10412.t1 vs. uniprot
Match: Q5DHI0 (SJCHGC02159 protein n=2 Tax=Schistosoma japonicum TaxID=6182 RepID=Q5DHI0_SCHJA)

HSP 1 Score: 72.4 bits (176), Expect = 1.440e-11
Identity = 34/128 (26.56%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   67 TLLTLATPEQFDALAAQA----DAEGALIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHMLRTLISVHVNRPHSSSL 190
            T++ +    Q + +  +A          +V+DF A+WCR C+ +     +L+  + ++ F K+DV+K+  + +++ +RS+PTF+F+  A ++DR   A  P  + D+++ +  + +  H    H SSL
Sbjct:    3 TVINITDKNQLEQILQEAKNVTSGPPTTVVMDFYASWCRPCSEIAPIFKELSTKYTNMKFIKIDVDKLEDVAQRYNVRSLPTFIFLRGAEQVDRITGAA-PQKLRDKVQELSISELDTHEGGSHKSSL 129          
BLAST of Ggra10412.t1 vs. uniprot
Match: A0A059AQA3 (Thioredoxin domain-containing protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AQA3_EUCGR)

HSP 1 Score: 69.3 bits (168), Expect = 2.370e-11
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   89 ALIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADK 162
            A +V+DF A+WC  C  +  A+S +   FA V FAK+DV+++  + R+F ++++PTFV V + +E+DR V A K
Sbjct:   69 AKMVIDFAASWCGPCRMMEPAVSAMASKFADVEFAKIDVDELSDVAREFSVQAMPTFVLVKKGKEVDRIVGAKK 142          
BLAST of Ggra10412.t1 vs. uniprot
Match: A9UWC4 (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWC4_MONBE)

HSP 1 Score: 68.6 bits (166), Expect = 3.110e-10
Identity = 43/112 (38.39%), Postives = 58/112 (51.79%), Query Frame = 0
Query:   79 ALAAQADAEGALIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHMLRTLISVHVNRPHSSSL 190
            A A QA  E  L+V+DF A WC  C  +  A+  ++  + +V F KVDV+  R     FRIR++PTFVFV   R +D    AD PA +  ++R  L          P S SL
Sbjct:   13 APALQACGED-LVVIDFFATWCGPCQRIAPAVETMSNKYPNVRFFKVDVDVCRETKTAFRIRAMPTFVFVKNTRSIDTLSGAD-PAALEAKIREHLAGGNGAAAGAPVSDSL 122          
BLAST of Ggra10412.t1 vs. uniprot
Match: A0A803ML33 (Thioredoxin domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803ML33_CHEQI)

HSP 1 Score: 65.1 bits (157), Expect = 5.600e-10
Identity = 28/90 (31.11%), Postives = 55/90 (61.11%), Query Frame = 0
Query:   90 LIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRHMLRTLIS 179
            L+V+DF A+WC  C ++  A+  +   +  V FAK+DV+++  + ++F ++++PTF+F+ + + +D+ V A K     D L H +   +S
Sbjct:   51 LLVVDFAASWCGPCKFIEPAVKAIANKYPDVEFAKIDVDELPDVAKEFEVQAMPTFIFLKKGKVVDKVVGAKK-----DELEHKIAKCVS 135          
BLAST of Ggra10412.t1 vs. uniprot
Match: thioredoxin H2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F5979 (thioredoxin H2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F5979)

HSP 1 Score: 64.3 bits (155), Expect = 9.950e-10
Identity = 27/83 (32.53%), Postives = 51/83 (61.45%), Query Frame = 0
Query:   90 LIVLDFVAAWCRKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVVADRLRH 172
            L+V+DF A+WC  C ++  A+  +   F+ V FAK+DV+++  + RQF ++++PTF+ +   + +D+ V A K  +     +H
Sbjct:   48 LLVVDFAASWCGPCKFIEPAIKAMANKFSDVEFAKIDVDELPDVARQFEVQAMPTFILLKNGKVVDKVVGAKKDELEKKIAKH 130          
BLAST of Ggra10412.t1 vs. uniprot
Match: A0A6P8WXY8 (Thioredoxin n=1 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8WXY8_DROAB)

HSP 1 Score: 63.2 bits (152), Expect = 1.590e-9
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   86 AEGALIVLDFVAAWCRKCTYLLAALSKLTPSF-AHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLRARELDRFVAADKPAVV 166
            AEG ++VLDF A WC  C  +   +  L   +   V F KV+V+K   L +++++RS+PTFVF+  AR L   + AD+  +V
Sbjct:   20 AEGKVVVLDFYATWCGPCKEIEKTVKSLARQYEGKVIFLKVNVDKYDELVQRYKVRSMPTFVFLRGARRLGSIIGADEHKLV 101          
The following BLAST results are available for this feature:
BLAST of Ggra10412.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
thioredoxin H2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C40FA8.890e-1340.48thioredoxin H2 n=1 Tax=Tarenaya hassleriana TaxID=... [more]
thioredoxin H5-like n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B784B029.520e-1332.74thioredoxin H5-like n=1 Tax=Chenopodium quinoa Tax... [more]
A0A8B8MU149.540e-1238.55thioredoxin H2 n=3 Tax=Myrtoideae TaxID=1699513 Re... [more]
A0A803LKG61.000e-1130.91Thioredoxin domain-containing protein n=1 Tax=Chen... [more]
Q5DHI01.440e-1126.56SJCHGC02159 protein n=2 Tax=Schistosoma japonicum ... [more]
A0A059AQA32.370e-1141.89Thioredoxin domain-containing protein n=1 Tax=Euca... [more]
A9UWC43.110e-1038.39Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A803ML335.600e-1031.11Thioredoxin domain-containing protein n=2 Tax=Chen... [more]
thioredoxin H2 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F59799.950e-1032.53thioredoxin H2 n=1 Tax=Beta vulgaris subsp. vulgar... [more]
A0A6P8WXY81.590e-939.02Thioredoxin n=1 Tax=Drosophila albomicans TaxID=72... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 63..176
e-value: 5.8E-19
score: 70.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..213
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 73..164
NoneNo IPR availableCDDcd02947TRX_familycoord: 75..170
e-value: 6.41347E-19
score: 76.0576
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 73..164
e-value: 1.3E-13
score: 50.8
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 50..179
score: 9.695581
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 61..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000108_piloncontigtig00000108_pilon:252368..253009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10412.t1Ggra10412.t1Gracilaria gracilis GNS1m malemRNAtig00000108_pilon 252368..253009 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10412.t1 ID=Ggra10412.t1|Name=Ggra10412.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=214bp
MCAFVPCSPPLALDAPPPPQSPLRQRARSWAASTTRRATRATLASPPSPP
SPSKQPPAPSPPFVPGTLLTLATPEQFDALAAQADAEGALIVLDFVAAWC
RKCTYLLAALSKLTPSFAHVYFAKVDVNKMRRLPRQFRIRSVPTFVFVLR
ARELDRFVAADKPAVVADRLRHMLRTLISVHVNRPHSSSLDLPPSPPQPP
SPPQPPSSPPPPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf