Ggra10306.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10306.t1
Unique NameGgra10306.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length222
Homology
BLAST of Ggra10306.t1 vs. uniprot
Match: A0A2V3J6U1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 289 bits (740), Expect = 1.500e-96
Identity = 140/221 (63.35%), Postives = 176/221 (79.64%), Query Frame = 0
Query:    2 MKLFSAACLLAMLVPALAQHVSNHVCQNRCNADRTLSERECNHPVTRTLCELKEC-DGGFSCSLPANSFLIANPQLPTLEMAVEYTWSPEQRDLDTSTRFLDANVGYSCNNPTPHVQFGGDNTSHGGSEVAVIDFEQARADGEWQSATSVLAHAGWYNSDNQGGAQLKVSLRRKTDGAVAGGATLSTRIQPGTQSDCSSTKVAEVKIVRGALHTRVMLVSA 221
            M+ +    LLA +VP LAQH SN VC NRCN DRTLS+REC+HPVTR+LC ++EC D G+SCS+P NSF+I+N QL  LE  +EYTWSPEQRDLDTSTRFLD NVG+SC++   ++ FGGDNTS GG+EVAVID E+AR DG+W+ +T+++++AGW+ SDNQGGAQ+KV LRRK+DG +A  A++S RI PGTQ  CS   VA VKI+RG+LHTRV L  A
Sbjct:    1 MRCYFVFFLLASVVPILAQHASNDVCPNRCNTDRTLSDRECDHPVTRSLCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFLDGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEKA 221          
BLAST of Ggra10306.t1 vs. uniprot
Match: A0A2V3ICG8 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICG8_9FLOR)

HSP 1 Score: 240 bits (612), Expect = 2.520e-76
Identity = 112/184 (60.87%), Postives = 148/184 (80.43%), Query Frame = 0
Query:   39 ERECNHPVTRTLCELKECDG-GFSCSLPANSFLIANPQLPTLEMAVEYTWSPEQRDLDTSTRFLDANVGYSCNNPTPHVQFGGDNTSHGGSEVAVIDFEQARADGEWQSATSVLAHAGWYNSDNQGGAQLKVSLRRKTDGAVAGGATLSTRIQPGTQSDCSSTKVAEVKIVRGALHTRVMLVSA 221
            +RECNHPVTR++C ++EC+  G+SCS+  NSF+I+N QLP LE  +EYTWSPEQRDLD STRFLD NVG+ C  P  ++ FGGDNTS+G +EV VID E+AR D +W+ +T+++++A W+ SDNQGGAQ++V LRRK+DG +A  A++S RI PGTQS+CSS KVA VKI+RG++HTRV L  A
Sbjct:   93 DRECNHPVTRSVCAVEECENNGYSCSMRGNSFMISNNQLPLLEFVIEYTWSPEQRDLDKSTRFLDGNVGFRCTGPNDYLDFGGDNTSNGETEVVVIDVEKARQDSKWEDSTAIISNARWFASDNQGGAQMRVYLRRKSDGGLAEEASVSDRINPGTQSNCSSHKVAAVKIIRGSMHTRVTLEKA 276          
BLAST of Ggra10306.t1 vs. uniprot
Match: A0A2V3J5L0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5L0_9FLOR)

HSP 1 Score: 191 bits (486), Expect = 5.820e-58
Identity = 100/202 (49.50%), Postives = 130/202 (64.36%), Query Frame = 0
Query:   26 VCQNRCNADRTLSERECNHPVTRTLCELKECDG------GFSCSLPANSFLIANPQLPTLEMAVEYTWSPEQRDLDTSTRFLDANVGYSCNNPTPHVQFGGDNTSHGGSEVAVIDFEQARADGEWQSATSVLAHAGWYNSDNQGGAQLKVSLRRKTDGAVAGGATLSTRIQPGTQSDCSSTKVAEVKIVRGALHTRVMLVSA 221
            +C NRCN +R +S+REC+  VTR +C +  C        GF C +P NSF+I N  LP LE  VEY+WS  Q DLDTSTRFLDANVGYSC+    +V F GD+ S+GG E   ID  +A  + +   +TSV   AGW+ ++++G A LKV LR+K+D A+  GA LS+ I PGTQ  C++T V  V+IVR   HTR  LV A
Sbjct:   23 MCPNRCNTNRAMSQRECSVAVTRGVCSVDSCSPPAYNQTGFICRMPRNSFIIPNTNLPLLEFVVEYSWSSSQSDLDTSTRFLDANVGYSCSPDKNYVAFSGDDVSYGGKESITIDVLEAFEEYQLSGSTSVATFAGWHGNEDEGDATLKVFLRKKSDLALIPGAVLSSTINPGTQYGCAATAVGTVQIVRAQHHTRFTLVEA 224          
BLAST of Ggra10306.t1 vs. uniprot
Match: A0A2V3IS11 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 3.540e-46
Identity = 89/199 (44.72%), Postives = 116/199 (58.29%), Query Frame = 0
Query:   26 VCQNRCNADRTLSERECNHPVTRTLCELKEC------DGGFSCSLPANSFLIANPQLPTLEMAVEYTWSPEQRDLDTSTRFLDANVGYSCNNPTPHVQFGGDNTSHGGSEVAVIDFEQARADGEWQSATSVLAHAGWYNSDNQGGAQLKVSLRRKTDGAVAGGATLSTRIQPGTQSDCSSTKVAEVKIVRGALHTRVML 218
            +C N+C  +  +  REC       LC ++ C      D GFSCSLP  SFL+ N +L   EM + Y W   +RDLDTSTRFL ANVG+ C   + ++++ GD++ +GG E  V+DF++AR DG W   TS+  HAGW+ S  QG A + V +RR TD    G   L   I PGTQ  CS  +VA VKI RG   TRV L
Sbjct:   26 ICPNQCYKNSRMPIRECRRSNLAHLCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGANVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRR-TDNHEEGN-NLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTL 222          
The following BLAST results are available for this feature:
BLAST of Ggra10306.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J6U11.500e-9663.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ICG82.520e-7660.87Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3J5L05.820e-5849.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS113.540e-4644.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000016_piloncontigtig00000016_pilon:646440..647105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10306.t1Ggra10306.t1Gracilaria gracilis GNS1m malemRNAtig00000016_pilon 646440..647105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10306.t1 ID=Ggra10306.t1|Name=Ggra10306.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=222bp
MMKLFSAACLLAMLVPALAQHVSNHVCQNRCNADRTLSERECNHPVTRTL
CELKECDGGFSCSLPANSFLIANPQLPTLEMAVEYTWSPEQRDLDTSTRF
LDANVGYSCNNPTPHVQFGGDNTSHGGSEVAVIDFEQARADGEWQSATSV
LAHAGWYNSDNQGGAQLKVSLRRKTDGAVAGGATLSTRIQPGTQSDCSST
KVAEVKIVRGALHTRVMLVSA*
back to top